EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000014185 (Gene tree)
Gene ID: 101155706
Gene Symbol: dhx40
Alias: -
Full Name: DEAH-box helicase 40
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 13215 bases
Position: chr13:28132084-28145298
Accession: 101155706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000036916	HA2	PF04408.23	2.2e-17	1	1
ENSORLP00000041831	HA2	PF04408.23	2.2e-17	1	1
ENSORLP00000017794	HA2	PF04408.23	2.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000035761	-	3083	-	ENSORLP00000036916	729 (aa)	-	UPI000CE1AF6D
ENSORLT00000039291	-	7079	XM_023961283	ENSORLP00000041831	729 (aa)	XP_023817051	UPI000CE1AF6D
ENSORLT00000017795	-	2229	-	ENSORLP00000017794	742 (aa)	-	H2MGQ4

Gene Model

Click here to download ENSORLG00000014185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000014185's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000014185	dhx40	81	41.935	ENSORLG00000019098	YTHDC2	50	41.935
ENSORLG00000014185	dhx40	93	40.517	ENSORLG00000029010	DHX15	87	40.517
ENSORLG00000014185	dhx40	91	43.427	ENSORLG00000015982	dhx16	99	38.977
ENSORLG00000014185	dhx40	90	39.111	ENSORLG00000011817	dhx33	93	39.201
ENSORLG00000014185	dhx40	91	39.381	ENSORLG00000004819	dhx15	91	39.381
ENSORLG00000014185	dhx40	94	40.730	ENSORLG00000007853	dhx38	52	40.730
ENSORLG00000014185	dhx40	86	44.758	ENSORLG00000002635	dhx37	59	44.758
ENSORLG00000014185	dhx40	94	43.084	ENSORLG00000011951	dhx8	55	42.877
ENSORLG00000014185	dhx40	90	40.807	ENSORLG00000009467	zgc:158828	93	40.801

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000014185	dhx40	99	65.746	ENSG00000108406	DHX40	99	62.681	Homo_sapiens
ENSORLG00000014185	dhx40	98	88.827	ENSAPOG00000018707	dhx40	99	88.356	Acanthochromis_polyacanthus
ENSORLG00000014185	dhx40	99	65.975	ENSAMEG00000011567	DHX40	93	65.702	Ailuropoda_melanoleuca
ENSORLG00000014185	dhx40	98	89.106	ENSACIG00000020220	dhx40	99	88.767	Amphilophus_citrinellus
ENSORLG00000014185	dhx40	98	88.547	ENSAOCG00000000250	dhx40	99	88.219	Amphiprion_ocellaris
ENSORLG00000014185	dhx40	98	87.989	ENSAPEG00000022898	dhx40	98	87.671	Amphiprion_percula
ENSORLG00000014185	dhx40	98	88.408	ENSATEG00000023287	dhx40	99	88.049	Anabas_testudineus
ENSORLG00000014185	dhx40	90	68.397	ENSAPLG00000013368	DHX40	98	68.493	Anas_platyrhynchos
ENSORLG00000014185	dhx40	98	68.163	ENSACAG00000012418	DHX40	97	68.465	Anolis_carolinensis
ENSORLG00000014185	dhx40	99	65.608	ENSANAG00000019888	DHX40	93	65.608	Aotus_nancymaae
ENSORLG00000014185	dhx40	98	88.531	ENSACLG00000024213	dhx40	98	88.171	Astatotilapia_calliptera
ENSORLG00000014185	dhx40	81	75.850	ENSAMXG00000002031	dhx40	95	75.000	Astyanax_mexicanus
ENSORLG00000014185	dhx40	99	65.746	ENSBTAG00000017868	DHX40	93	65.746	Bos_taurus
ENSORLG00000014185	dhx40	99	65.470	ENSCJAG00000001554	DHX40	93	65.470	Callithrix_jacchus
ENSORLG00000014185	dhx40	99	65.427	ENSCAFG00000017625	DHX40	93	65.014	Canis_familiaris
ENSORLG00000014185	dhx40	99	65.565	ENSCAFG00020026016	DHX40	84	65.565	Canis_lupus_dingo
ENSORLG00000014185	dhx40	99	65.746	ENSCHIG00000016173	DHX40	93	65.746	Capra_hircus
ENSORLG00000014185	dhx40	99	65.608	ENSTSYG00000034797	DHX40	93	65.608	Carlito_syrichta
ENSORLG00000014185	dhx40	94	57.038	ENSCAPG00000016034	DHX40	96	57.038	Cavia_aperea
ENSORLG00000014185	dhx40	99	65.698	ENSCPOG00000003432	DHX40	92	65.698	Cavia_porcellus
ENSORLG00000014185	dhx40	90	66.667	ENSCCAG00000028712	DHX40	95	66.667	Cebus_capucinus
ENSORLG00000014185	dhx40	99	62.448	ENSCATG00000030038	DHX40	92	62.448	Cercocebus_atys
ENSORLG00000014185	dhx40	99	65.884	ENSCLAG00000012016	DHX40	99	62.874	Chinchilla_lanigera
ENSORLG00000014185	dhx40	87	61.709	ENSCSAG00000005860	DHX40	98	61.709	Chlorocebus_sabaeus
ENSORLG00000014185	dhx40	99	66.298	ENSCHOG00000004423	DHX40	97	66.298	Choloepus_hoffmanni
ENSORLG00000014185	dhx40	99	69.806	ENSCPBG00000006085	DHX40	97	69.368	Chrysemys_picta_bellii
ENSORLG00000014185	dhx40	99	65.746	ENSCANG00000038492	DHX40	93	65.746	Colobus_angolensis_palliatus
ENSORLG00000014185	dhx40	99	65.608	ENSCGRG00001000389	Dhx40	93	65.608	Cricetulus_griseus_chok1gshd
ENSORLG00000014185	dhx40	99	65.608	ENSCGRG00000009491	Dhx40	93	65.608	Cricetulus_griseus_crigri
ENSORLG00000014185	dhx40	99	84.890	ENSCSEG00000002696	dhx40	99	84.679	Cynoglossus_semilaevis
ENSORLG00000014185	dhx40	99	86.951	ENSCVAG00000018991	dhx40	98	86.951	Cyprinodon_variegatus
ENSORLG00000014185	dhx40	99	76.243	ENSDARG00000041586	dhx40	98	76.243	Danio_rerio
ENSORLG00000014185	dhx40	99	66.298	ENSDNOG00000025497	DHX40	93	66.298	Dasypus_novemcinctus
ENSORLG00000014185	dhx40	99	62.691	ENSDORG00000006521	Dhx40	92	62.691	Dipodomys_ordii
ENSORLG00000014185	dhx40	80	56.678	ENSETEG00000018771	DHX40	75	56.678	Echinops_telfairi
ENSORLG00000014185	dhx40	99	65.746	ENSEASG00005002476	DHX40	93	65.746	Equus_asinus_asinus
ENSORLG00000014185	dhx40	99	65.746	ENSECAG00000018606	DHX40	93	65.746	Equus_caballus
ENSORLG00000014185	dhx40	99	62.431	ENSEEUG00000002531	DHX40	93	62.431	Erinaceus_europaeus
ENSORLG00000014185	dhx40	99	81.155	ENSELUG00000008644	dhx40	98	81.155	Esox_lucius
ENSORLG00000014185	dhx40	99	65.746	ENSFCAG00000001409	DHX40	93	65.746	Felis_catus
ENSORLG00000014185	dhx40	99	67.172	ENSFALG00000005587	DHX40	99	67.172	Ficedula_albicollis
ENSORLG00000014185	dhx40	99	65.884	ENSFDAG00000017214	DHX40	99	62.874	Fukomys_damarensis
ENSORLG00000014185	dhx40	98	88.128	ENSFHEG00000001190	dhx40	98	87.912	Fundulus_heteroclitus
ENSORLG00000014185	dhx40	98	79.021	ENSGMOG00000001188	dhx40	99	79.021	Gadus_morhua
ENSORLG00000014185	dhx40	86	67.949	ENSGALG00000005126	DHX40	98	67.949	Gallus_gallus
ENSORLG00000014185	dhx40	98	87.849	ENSGAFG00000014480	dhx40	98	87.500	Gambusia_affinis
ENSORLG00000014185	dhx40	98	86.657	ENSGACG00000006300	dhx40	99	86.307	Gasterosteus_aculeatus
ENSORLG00000014185	dhx40	99	68.698	ENSGAGG00000024012	DHX40	97	68.269	Gopherus_agassizii
ENSORLG00000014185	dhx40	53	62.274	ENSGGOG00000042982	-	99	62.274	Gorilla_gorilla
ENSORLG00000014185	dhx40	98	88.811	ENSHBUG00000022398	dhx40	98	88.446	Haplochromis_burtoni
ENSORLG00000014185	dhx40	99	66.019	ENSHGLG00000006600	DHX40	99	62.874	Heterocephalus_glaber_female
ENSORLG00000014185	dhx40	87	56.894	ENSHGLG00000006411	-	89	56.894	Heterocephalus_glaber_female
ENSORLG00000014185	dhx40	87	56.894	ENSHGLG00100009091	-	89	56.714	Heterocephalus_glaber_male
ENSORLG00000014185	dhx40	99	66.019	ENSHGLG00100009935	-	99	62.874	Heterocephalus_glaber_male
ENSORLG00000014185	dhx40	99	83.654	ENSHCOG00000012913	dhx40	98	82.993	Hippocampus_comes
ENSORLG00000014185	dhx40	99	76.066	ENSIPUG00000015673	dhx40	98	76.066	Ictalurus_punctatus
ENSORLG00000014185	dhx40	99	61.602	ENSSTOG00000016219	DHX40	99	62.874	Ictidomys_tridecemlineatus
ENSORLG00000014185	dhx40	99	62.431	ENSJJAG00000010433	Dhx40	93	62.259	Jaculus_jaculus
ENSORLG00000014185	dhx40	98	86.592	ENSKMAG00000003505	dhx40	99	86.027	Kryptolebias_marmoratus
ENSORLG00000014185	dhx40	98	86.173	ENSLBEG00000018707	dhx40	99	85.970	Labrus_bergylta
ENSORLG00000014185	dhx40	99	72.039	ENSLACG00000008892	DHX40	96	72.039	Latimeria_chalumnae
ENSORLG00000014185	dhx40	99	70.330	ENSLOCG00000003916	dhx40	99	70.330	Lepisosteus_oculatus
ENSORLG00000014185	dhx40	99	65.427	ENSLAFG00000000087	DHX40	93	65.608	Loxodonta_africana
ENSORLG00000014185	dhx40	99	65.608	ENSMFAG00000041526	DHX40	93	65.608	Macaca_fascicularis
ENSORLG00000014185	dhx40	99	61.326	ENSMNEG00000043921	DHX40	93	61.157	Macaca_nemestrina
ENSORLG00000014185	dhx40	99	65.608	ENSMLEG00000043033	DHX40	93	65.608	Mandrillus_leucophaeus
ENSORLG00000014185	dhx40	98	87.849	ENSMAMG00000001985	dhx40	98	87.500	Mastacembelus_armatus
ENSORLG00000014185	dhx40	98	88.547	ENSMZEG00005013826	dhx40	99	88.082	Maylandia_zebra
ENSORLG00000014185	dhx40	87	67.610	ENSMGAG00000007238	DHX40	98	67.610	Meleagris_gallopavo
ENSORLG00000014185	dhx40	88	68.000	ENSMAUG00000014047	Dhx40	88	68.000	Mesocricetus_auratus
ENSORLG00000014185	dhx40	99	65.746	ENSMICG00000027647	DHX40	93	65.746	Microcebus_murinus
ENSORLG00000014185	dhx40	99	65.289	ENSMOCG00000022697	Dhx40	99	62.874	Microtus_ochrogaster
ENSORLG00000014185	dhx40	98	83.101	ENSMMOG00000005353	dhx40	98	82.555	Mola_mola
ENSORLG00000014185	dhx40	99	67.129	ENSMODG00000014468	DHX40	94	67.129	Monodelphis_domestica
ENSORLG00000014185	dhx40	99	86.676	ENSMALG00000012529	dhx40	98	86.676	Monopterus_albus
ENSORLG00000014185	dhx40	99	65.608	MGP_CAROLIEiJ_G0016920	Dhx40	99	62.275	Mus_caroli
ENSORLG00000014185	dhx40	99	65.746	ENSMUSG00000018425	Dhx40	99	62.275	Mus_musculus
ENSORLG00000014185	dhx40	99	65.470	MGP_PahariEiJ_G0018050	Dhx40	99	62.275	Mus_pahari
ENSORLG00000014185	dhx40	99	65.746	MGP_SPRETEiJ_G0017766	Dhx40	99	62.275	Mus_spretus
ENSORLG00000014185	dhx40	99	65.746	ENSMPUG00000015213	DHX40	93	65.746	Mustela_putorius_furo
ENSORLG00000014185	dhx40	99	65.475	ENSMLUG00000003644	DHX40	93	65.475	Myotis_lucifugus
ENSORLG00000014185	dhx40	99	65.289	ENSNGAG00000014507	Dhx40	99	62.874	Nannospalax_galili
ENSORLG00000014185	dhx40	98	87.989	ENSNBRG00000018144	dhx40	99	87.671	Neolamprologus_brichardi
ENSORLG00000014185	dhx40	76	64.103	ENSMEUG00000002887	-	86	64.103	Notamacropus_eugenii
ENSORLG00000014185	dhx40	99	65.427	ENSODEG00000013635	DHX40	99	62.874	Octodon_degus
ENSORLG00000014185	dhx40	99	88.920	ENSONIG00000005195	dhx40	100	88.920	Oreochromis_niloticus
ENSORLG00000014185	dhx40	99	70.263	ENSOANG00000008516	DHX40	98	69.565	Ornithorhynchus_anatinus
ENSORLG00000014185	dhx40	100	99.314	ENSORLG00015016235	dhx40	100	99.314	Oryzias_latipes_hsok
ENSORLG00000014185	dhx40	100	94.650	ENSOMEG00000006570	dhx40	100	94.650	Oryzias_melastigma
ENSORLG00000014185	dhx40	99	66.022	ENSOGAG00000007790	DHX40	93	66.022	Otolemur_garnettii
ENSORLG00000014185	dhx40	99	65.746	ENSOARG00000012632	DHX40	93	65.746	Ovis_aries
ENSORLG00000014185	dhx40	99	65.470	ENSPPAG00000032782	DHX40	93	65.470	Pan_paniscus
ENSORLG00000014185	dhx40	99	65.746	ENSPPRG00000010073	DHX40	93	65.746	Panthera_pardus
ENSORLG00000014185	dhx40	99	65.608	ENSPTIG00000006557	DHX40	93	65.608	Panthera_tigris_altaica
ENSORLG00000014185	dhx40	99	65.608	ENSPANG00000022266	DHX40	93	65.608	Papio_anubis
ENSORLG00000014185	dhx40	99	74.691	ENSPKIG00000013016	dhx40	99	74.049	Paramormyrops_kingsleyae
ENSORLG00000014185	dhx40	99	69.529	ENSPSIG00000010463	DHX40	93	68.614	Pelodiscus_sinensis
ENSORLG00000014185	dhx40	99	83.795	ENSPMGG00000015257	dhx40	98	83.795	Periophthalmus_magnuspinnatus
ENSORLG00000014185	dhx40	99	65.289	ENSPEMG00000013338	Dhx40	99	62.874	Peromyscus_maniculatus_bairdii
ENSORLG00000014185	dhx40	99	67.313	ENSPCIG00000021874	DHX40	94	67.313	Phascolarctos_cinereus
ENSORLG00000014185	dhx40	98	88.128	ENSPFOG00000006579	dhx40	98	87.775	Poecilia_formosa
ENSORLG00000014185	dhx40	98	88.128	ENSPLAG00000007062	dhx40	98	87.775	Poecilia_latipinna
ENSORLG00000014185	dhx40	98	87.989	ENSPMEG00000008446	dhx40	98	87.637	Poecilia_mexicana
ENSORLG00000014185	dhx40	99	88.049	ENSPREG00000005584	dhx40	98	88.049	Poecilia_reticulata
ENSORLG00000014185	dhx40	99	62.569	ENSPPYG00000008812	DHX40	92	62.569	Pongo_abelii
ENSORLG00000014185	dhx40	77	65.018	ENSPCAG00000006468	DHX40	76	65.018	Procavia_capensis
ENSORLG00000014185	dhx40	78	60.420	ENSPCOG00000008219	DHX40	85	60.420	Propithecus_coquereli
ENSORLG00000014185	dhx40	98	88.112	ENSPNYG00000013343	dhx40	98	87.758	Pundamilia_nyererei
ENSORLG00000014185	dhx40	99	70.799	ENSPNAG00000024815	dhx40	99	70.163	Pygocentrus_nattereri
ENSORLG00000014185	dhx40	99	65.289	ENSRNOG00000004549	Dhx40	93	65.289	Rattus_norvegicus
ENSORLG00000014185	dhx40	99	65.608	ENSSBOG00000024911	DHX40	93	65.608	Saimiri_boliviensis_boliviensis
ENSORLG00000014185	dhx40	99	67.729	ENSSHAG00000016859	DHX40	95	67.075	Sarcophilus_harrisii
ENSORLG00000014185	dhx40	99	74.518	ENSSFOG00015003020	dhx40	98	74.518	Scleropages_formosus
ENSORLG00000014185	dhx40	98	86.453	ENSSMAG00000001178	dhx40	98	86.351	Scophthalmus_maximus
ENSORLG00000014185	dhx40	98	89.246	ENSSDUG00000012511	dhx40	98	89.011	Seriola_dumerili
ENSORLG00000014185	dhx40	98	89.106	ENSSLDG00000010146	dhx40	98	88.874	Seriola_lalandi_dorsalis
ENSORLG00000014185	dhx40	85	65.459	ENSSARG00000009800	DHX40	79	65.459	Sorex_araneus
ENSORLG00000014185	dhx40	98	69.499	ENSSPUG00000016309	DHX40	97	68.871	Sphenodon_punctatus
ENSORLG00000014185	dhx40	98	87.709	ENSSPAG00000015901	dhx40	99	87.208	Stegastes_partitus
ENSORLG00000014185	dhx40	99	65.746	ENSSSCG00000017665	DHX40	93	65.746	Sus_scrofa
ENSORLG00000014185	dhx40	99	67.961	ENSTGUG00000007512	DHX40	98	67.961	Taeniopygia_guttata
ENSORLG00000014185	dhx40	99	78.680	ENSTRUG00000010369	dhx40	99	78.356	Takifugu_rubripes
ENSORLG00000014185	dhx40	99	79.167	ENSTNIG00000004503	dhx40	100	79.167	Tetraodon_nigroviridis
ENSORLG00000014185	dhx40	99	64.917	ENSTBEG00000014980	DHX40	93	64.917	Tupaia_belangeri
ENSORLG00000014185	dhx40	99	61.846	ENSTTRG00000017203	DHX40	93	61.846	Tursiops_truncatus
ENSORLG00000014185	dhx40	99	65.884	ENSUAMG00000009734	DHX40	99	66.248	Ursus_americanus
ENSORLG00000014185	dhx40	99	65.884	ENSUMAG00000022721	DHX40	93	65.884	Ursus_maritimus
ENSORLG00000014185	dhx40	99	65.884	ENSVPAG00000009355	DHX40	97	65.702	Vicugna_pacos
ENSORLG00000014185	dhx40	99	65.565	ENSVVUG00000013502	DHX40	84	65.565	Vulpes_vulpes
ENSORLG00000014185	dhx40	99	65.789	ENSXETG00000010939	dhx40	99	65.789	Xenopus_tropicalis
ENSORLG00000014185	dhx40	98	87.377	ENSXCOG00000001822	dhx40	96	87.377	Xiphophorus_couchianus
ENSORLG00000014185	dhx40	98	87.430	ENSXMAG00000012466	dhx40	98	87.088	Xiphophorus_maculatus