EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000014311 (Gene tree)
Gene ID: 101173757
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 883
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 3338 bases
Position: chr23:14685053-14688390
Accession: 101173757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000017944	zf-C2H2	PF00096.26	5.8e-15	1	2
ENSORLP00000017944	zf-C2H2	PF00096.26	5.8e-15	2	2
ENSORLP00000017944	zf-met	PF12874.7	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000017945	-	1972	XM_004083155	ENSORLP00000017944	622 (aa)	XP_004083203	H2MH46

Gene Model

Click here to download ENSORLG00000014311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000014311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000014311	-	53	44.944	ENSORLG00000028323	-	93	43.307
ENSORLG00000014311	-	54	40.000	ENSORLG00000016981	-	92	39.041
ENSORLG00000014311	-	53	39.823	ENSORLG00000024399	-	82	39.171
ENSORLG00000014311	-	54	42.500	ENSORLG00000027186	-	89	42.500
ENSORLG00000014311	-	57	39.378	ENSORLG00000023744	-	82	39.378
ENSORLG00000014311	-	53	41.850	ENSORLG00000026852	-	62	41.850
ENSORLG00000014311	-	51	38.824	ENSORLG00000013673	si:ch211-216l23.1	50	38.824
ENSORLG00000014311	-	61	39.086	ENSORLG00000025080	-	93	36.522
ENSORLG00000014311	-	55	43.636	ENSORLG00000027303	-	62	43.636
ENSORLG00000014311	-	53	38.914	ENSORLG00000024896	-	73	38.914
ENSORLG00000014311	-	53	37.021	ENSORLG00000000253	-	98	41.129
ENSORLG00000014311	-	55	37.576	ENSORLG00000022677	-	61	37.576
ENSORLG00000014311	-	53	41.176	ENSORLG00000029172	-	71	41.176
ENSORLG00000014311	-	55	33.171	ENSORLG00000012533	PRDM15	53	33.831
ENSORLG00000014311	-	63	39.487	ENSORLG00000025717	-	84	45.455
ENSORLG00000014311	-	59	36.082	ENSORLG00000012485	-	57	40.310
ENSORLG00000014311	-	53	45.455	ENSORLG00000023086	-	79	45.455
ENSORLG00000014311	-	97	37.652	ENSORLG00000027418	-	91	37.652

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000014311	-	99	62.201	ENSGAFG00000016139	-	99	62.201	Gambusia_affinis
ENSORLG00000014311	-	54	63.529	ENSMALG00000014761	-	98	64.118	Monopterus_albus
ENSORLG00000014311	-	100	97.749	ENSORLG00020016116	-	100	97.749	Oryzias_latipes_hni
ENSORLG00000014311	-	100	97.428	ENSORLG00015014797	-	100	97.428	Oryzias_latipes_hsok
ENSORLG00000014311	-	53	35.407	ENSOMEG00000015640	-	71	33.659	Oryzias_melastigma
ENSORLG00000014311	-	96	64.407	ENSPFOG00000004204	-	99	60.692	Poecilia_formosa
ENSORLG00000014311	-	99	62.041	ENSPLAG00000022088	-	93	62.041	Poecilia_latipinna
ENSORLG00000014311	-	99	62.360	ENSPMEG00000001411	-	93	62.360	Poecilia_mexicana
ENSORLG00000014311	-	60	35.000	ENSPREG00000016270	-	78	38.983	Poecilia_reticulata
ENSORLG00000014311	-	99	62.679	ENSPREG00000004161	-	99	62.679	Poecilia_reticulata
ENSORLG00000014311	-	96	62.046	ENSPNYG00000020534	-	99	62.046	Pundamilia_nyererei
ENSORLG00000014311	-	99	62.360	ENSXMAG00000011035	-	99	62.360	Xiphophorus_maculatus