EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000014385 (Gene tree)
Gene ID: 101159528
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 7771 bases
Position: chr15:30343696-30351466
Accession: 101159528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000018032	KH_1	PF00013.29	1.6e-53	1	3
ENSORLP00000018032	KH_1	PF00013.29	1.6e-53	2	3
ENSORLP00000018032	KH_1	PF00013.29	1.6e-53	3	3
ENSORLP00000018031	KH_1	PF00013.29	5.2e-34	1	2
ENSORLP00000018031	KH_1	PF00013.29	5.2e-34	2	2
ENSORLP00000040158	KH_1	PF00013.29	1.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000026933	-	2593	-	ENSORLP00000040158	364 (aa)	-	-
ENSORLT00000018033	-	2503	XM_004077523	ENSORLP00000018032	434 (aa)	XP_004077571	H2MHC7
ENSORLT00000018032	-	2521	-	ENSORLP00000018031	440 (aa)	-	H2MHC6

Gene Model

Click here to download ENSORLG00000014385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000014385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000014385	-	72	31.013	ENSORLG00000025629	igf2bp1	63	30.818
ENSORLG00000014385	-	99	52.620	ENSORLG00000009899	-	99	52.620
ENSORLG00000014385	-	51	39.474	ENSORLG00000003540	fubp1	53	39.474
ENSORLG00000014385	-	55	47.059	ENSORLG00000005161	hnrnpk	56	47.059
ENSORLG00000014385	-	75	69.632	ENSORLG00000005176	PCBP2	95	72.313
ENSORLG00000014385	-	56	49.206	ENSORLG00000004704	hnrpkl	59	47.059
ENSORLG00000014385	-	72	74.121	ENSORLG00000022739	-	97	73.968
ENSORLG00000014385	-	74	32.911	ENSORLG00000004712	igf2bp3	66	32.911
ENSORLG00000014385	-	73	35.211	ENSORLG00000016532	igf2bp2b	63	35.971
ENSORLG00000014385	-	68	39.726	ENSORLG00000007103	fubp3	68	39.726
ENSORLG00000014385	-	71	74.194	ENSORLG00000000059	pcbp3	98	74.194
ENSORLG00000014385	-	71	69.427	ENSORLG00000012872	pcbp2	95	69.427
ENSORLG00000014385	-	100	52.686	ENSORLG00000003061	pcbp4	96	52.479
ENSORLG00000014385	-	52	34.146	ENSORLG00000017565	-	59	34.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000014385	-	72	76.677	ENSG00000183570	PCBP3	97	69.143	Homo_sapiens
ENSORLG00000014385	-	73	96.519	ENSAPOG00000023735	zgc:110045	97	96.519	Acanthochromis_polyacanthus
ENSORLG00000014385	-	72	88.644	ENSACIG00000002577	zgc:110045	99	92.627	Amphilophus_citrinellus
ENSORLG00000014385	-	100	92.857	ENSAPEG00000000729	zgc:110045	100	92.857	Amphiprion_percula
ENSORLG00000014385	-	97	85.217	ENSATEG00000011191	zgc:110045	100	85.217	Anabas_testudineus
ENSORLG00000014385	-	100	92.857	ENSACLG00000019285	zgc:110045	100	92.857	Astatotilapia_calliptera
ENSORLG00000014385	-	72	76.677	ENSBTAG00000030775	PCBP3	97	68.571	Bos_taurus
ENSORLG00000014385	-	72	72.289	ENSCAFG00000011907	PCBP3	88	72.289	Canis_familiaris
ENSORLG00000014385	-	72	69.670	ENSCHIG00000015841	PCBP3	87	69.670	Capra_hircus
ENSORLG00000014385	-	52	66.667	ENSTSYG00000005254	PCBP3	95	66.255	Carlito_syrichta
ENSORLG00000014385	-	72	55.623	ENSCAPG00000006767	PCBP3	81	55.623	Cavia_aperea
ENSORLG00000014385	-	72	72.072	ENSCPOG00000003648	PCBP3	89	72.072	Cavia_porcellus
ENSORLG00000014385	-	72	76.677	ENSCCAG00000024561	PCBP3	99	66.377	Cebus_capucinus
ENSORLG00000014385	-	72	76.677	ENSCATG00000038419	PCBP3	88	76.677	Cercocebus_atys
ENSORLG00000014385	-	72	72.072	ENSCLAG00000006667	PCBP3	88	72.072	Chinchilla_lanigera
ENSORLG00000014385	-	72	76.677	ENSCANG00000026757	PCBP3	88	76.677	Colobus_angolensis_palliatus
ENSORLG00000014385	-	72	72.072	ENSCGRG00001006836	Pcbp3	88	72.072	Cricetulus_griseus_chok1gshd
ENSORLG00000014385	-	72	72.072	ENSCGRG00000001837	Pcbp3	88	72.072	Cricetulus_griseus_crigri
ENSORLG00000014385	-	100	91.244	ENSCSEG00000010020	zgc:110045	97	94.620	Cynoglossus_semilaevis
ENSORLG00000014385	-	50	79.724	ENSDARG00000057141	zgc:110045	97	79.724	Danio_rerio
ENSORLG00000014385	-	72	72.072	ENSDNOG00000049518	PCBP3	89	72.072	Dasypus_novemcinctus
ENSORLG00000014385	-	54	66.949	ENSEBUG00000009697	zgc:110045	99	67.136	Eptatretus_burgeri
ENSORLG00000014385	-	72	76.358	ENSEASG00005007068	PCBP3	88	76.358	Equus_asinus_asinus
ENSORLG00000014385	-	72	76.358	ENSECAG00000012413	PCBP3	88	76.358	Equus_caballus
ENSORLG00000014385	-	100	81.922	ENSELUG00000019784	zgc:110045	100	80.549	Esox_lucius
ENSORLG00000014385	-	72	76.677	ENSFCAG00000014812	PCBP3	88	76.677	Felis_catus
ENSORLG00000014385	-	72	76.358	ENSFDAG00000009117	PCBP3	88	76.358	Fukomys_damarensis
ENSORLG00000014385	-	72	80.882	ENSFHEG00000018838	-	92	93.035	Fundulus_heteroclitus
ENSORLG00000014385	-	70	90.554	ENSGMOG00000005953	zgc:110045	93	90.554	Gadus_morhua
ENSORLG00000014385	-	50	96.330	ENSGAFG00000017864	zgc:110045	96	96.330	Gambusia_affinis
ENSORLG00000014385	-	59	79.592	ENSGAFG00000017860	-	100	79.592	Gambusia_affinis
ENSORLG00000014385	-	72	94.268	ENSGACG00000003044	zgc:110045	97	94.268	Gasterosteus_aculeatus
ENSORLG00000014385	-	72	76.677	ENSGGOG00000003683	PCBP3	88	76.677	Gorilla_gorilla
ENSORLG00000014385	-	73	96.519	ENSHBUG00000012495	zgc:110045	97	96.519	Haplochromis_burtoni
ENSORLG00000014385	-	72	72.072	ENSHGLG00000018620	PCBP3	89	72.072	Heterocephalus_glaber_female
ENSORLG00000014385	-	72	72.072	ENSHGLG00100013590	PCBP3	89	72.072	Heterocephalus_glaber_male
ENSORLG00000014385	-	71	89.450	ENSHCOG00000000818	zgc:110045	99	89.450	Hippocampus_comes
ENSORLG00000014385	-	50	76.606	ENSIPUG00000003932	zgc:110045	81	76.606	Ictalurus_punctatus
ENSORLG00000014385	-	72	72.072	ENSSTOG00000007178	PCBP3	88	72.072	Ictidomys_tridecemlineatus
ENSORLG00000014385	-	72	72.372	ENSJJAG00000021192	Pcbp3	88	72.372	Jaculus_jaculus
ENSORLG00000014385	-	96	78.841	ENSKMAG00000016179	-	95	96.923	Kryptolebias_marmoratus
ENSORLG00000014385	-	73	87.087	ENSLBEG00000023074	zgc:110045	97	87.087	Labrus_bergylta
ENSORLG00000014385	-	69	74.359	ENSLAFG00000020835	PCBP3	96	74.359	Loxodonta_africana
ENSORLG00000014385	-	72	76.677	ENSMFAG00000034574	PCBP3	88	76.677	Macaca_fascicularis
ENSORLG00000014385	-	72	76.677	ENSMMUG00000003825	PCBP3	99	70.898	Macaca_mulatta
ENSORLG00000014385	-	72	76.677	ENSMNEG00000035551	PCBP3	97	76.677	Macaca_nemestrina
ENSORLG00000014385	-	72	76.677	ENSMLEG00000038785	PCBP3	97	68.944	Mandrillus_leucophaeus
ENSORLG00000014385	-	72	95.541	ENSMAMG00000014389	zgc:110045	99	95.541	Mastacembelus_armatus
ENSORLG00000014385	-	100	92.857	ENSMZEG00005011785	zgc:110045	100	92.857	Maylandia_zebra
ENSORLG00000014385	-	71	72.644	ENSMAUG00000007036	Pcbp3	87	72.644	Mesocricetus_auratus
ENSORLG00000014385	-	72	76.358	ENSMICG00000012679	PCBP3	88	76.358	Microcebus_murinus
ENSORLG00000014385	-	72	72.072	ENSMOCG00000016127	Pcbp3	88	72.072	Microtus_ochrogaster
ENSORLG00000014385	-	59	83.770	ENSMMOG00000008398	-	100	83.770	Mola_mola
ENSORLG00000014385	-	53	82.902	ENSMALG00000008782	-	99	82.653	Monopterus_albus
ENSORLG00000014385	-	72	72.289	MGP_CAROLIEiJ_G0015475	Pcbp3	99	72.926	Mus_caroli
ENSORLG00000014385	-	72	72.289	ENSMUSG00000001120	Pcbp3	99	72.926	Mus_musculus
ENSORLG00000014385	-	72	72.289	MGP_PahariEiJ_G0030889	Pcbp3	99	72.926	Mus_pahari
ENSORLG00000014385	-	72	72.289	MGP_SPRETEiJ_G0016288	Pcbp3	99	72.926	Mus_spretus
ENSORLG00000014385	-	72	72.072	ENSMLUG00000003074	PCBP3	88	72.072	Myotis_lucifugus
ENSORLG00000014385	-	72	72.072	ENSNGAG00000005416	Pcbp3	88	72.072	Nannospalax_galili
ENSORLG00000014385	-	100	93.318	ENSNBRG00000017646	zgc:110045	100	93.318	Neolamprologus_brichardi
ENSORLG00000014385	-	72	76.677	ENSNLEG00000002639	PCBP3	88	76.677	Nomascus_leucogenys
ENSORLG00000014385	-	72	66.857	ENSMEUG00000012960	PCBP3	97	66.857	Notamacropus_eugenii
ENSORLG00000014385	-	72	69.670	ENSODEG00000012873	PCBP3	89	69.670	Octodon_degus
ENSORLG00000014385	-	100	88.479	ENSONIG00000010370	zgc:110045	100	88.249	Oreochromis_niloticus
ENSORLG00000014385	-	55	71.484	ENSOANG00000006265	PCBP3	90	71.484	Ornithorhynchus_anatinus
ENSORLG00000014385	-	100	98.848	ENSORLG00020003139	zgc:110045	100	98.848	Oryzias_latipes_hni
ENSORLG00000014385	-	100	97.005	ENSOMEG00000015459	-	100	97.005	Oryzias_melastigma
ENSORLG00000014385	-	72	69.789	ENSOARG00000012704	PCBP3	88	69.789	Ovis_aries
ENSORLG00000014385	-	72	76.677	ENSPPAG00000021940	PCBP3	88	76.677	Pan_paniscus
ENSORLG00000014385	-	72	76.677	ENSPPRG00000003933	PCBP3	88	76.677	Panthera_pardus
ENSORLG00000014385	-	72	62.658	ENSPTIG00000012038	PCBP3	87	63.259	Panthera_tigris_altaica
ENSORLG00000014385	-	72	56.550	ENSPTRG00000014010	PCBP3	97	50.852	Pan_troglodytes
ENSORLG00000014385	-	72	76.677	ENSPANG00000023631	PCBP3	88	76.677	Papio_anubis
ENSORLG00000014385	-	50	57.143	ENSPMGG00000022531	-	96	57.143	Periophthalmus_magnuspinnatus
ENSORLG00000014385	-	100	73.589	ENSPMGG00000021588	-	99	73.864	Periophthalmus_magnuspinnatus
ENSORLG00000014385	-	72	72.072	ENSPEMG00000000587	Pcbp3	88	72.072	Peromyscus_maniculatus_bairdii
ENSORLG00000014385	-	76	92.470	ENSPFOG00000002348	zgc:110045	100	92.470	Poecilia_formosa
ENSORLG00000014385	-	50	92.202	ENSPLAG00000017488	zgc:110045	96	92.202	Poecilia_latipinna
ENSORLG00000014385	-	73	91.111	ENSPMEG00000012762	zgc:110045	96	96.330	Poecilia_mexicana
ENSORLG00000014385	-	100	89.631	ENSPREG00000001797	zgc:110045	95	97.209	Poecilia_reticulata
ENSORLG00000014385	-	57	68.966	ENSPPYG00000011525	-	94	68.966	Pongo_abelii
ENSORLG00000014385	-	70	58.824	ENSPCAG00000001454	PCBP3	98	58.824	Procavia_capensis
ENSORLG00000014385	-	72	76.358	ENSPCOG00000013797	PCBP3	88	76.358	Propithecus_coquereli
ENSORLG00000014385	-	56	76.471	ENSPVAG00000000832	PCBP3	73	76.471	Pteropus_vampyrus
ENSORLG00000014385	-	50	93.088	ENSPNYG00000004637	zgc:110045	99	93.088	Pundamilia_nyererei
ENSORLG00000014385	-	53	86.528	ENSPNYG00000004656	-	98	86.224	Pundamilia_nyererei
ENSORLG00000014385	-	50	80.184	ENSPNAG00000004501	zgc:110045	97	80.184	Pygocentrus_nattereri
ENSORLG00000014385	-	72	76.677	ENSRROG00000034567	PCBP3	88	76.677	Rhinopithecus_roxellana
ENSORLG00000014385	-	72	76.677	ENSSBOG00000005789	PCBP3	88	76.677	Saimiri_boliviensis_boliviensis
ENSORLG00000014385	-	100	92.627	ENSSMAG00000013541	zgc:110045	100	89.862	Scophthalmus_maximus
ENSORLG00000014385	-	97	91.594	ENSSDUG00000019371	zgc:110045	100	91.594	Seriola_dumerili
ENSORLG00000014385	-	100	93.548	ENSSLDG00000021064	zgc:110045	100	93.548	Seriola_lalandi_dorsalis
ENSORLG00000014385	-	73	96.835	ENSSPAG00000000563	zgc:110045	97	96.835	Stegastes_partitus
ENSORLG00000014385	-	72	76.677	ENSSSCG00000023041	PCBP3	88	76.677	Sus_scrofa
ENSORLG00000014385	-	53	83.938	ENSTRUG00000023273	-	99	83.673	Takifugu_rubripes
ENSORLG00000014385	-	54	58.650	ENSTBEG00000011882	-	73	58.650	Tupaia_belangeri
ENSORLG00000014385	-	69	75.725	ENSUAMG00000006491	PCBP3	96	75.725	Ursus_americanus
ENSORLG00000014385	-	72	64.012	ENSUMAG00000025403	PCBP3	84	74.359	Ursus_maritimus
ENSORLG00000014385	-	72	68.615	ENSVVUG00000023862	PCBP3	97	65.257	Vulpes_vulpes
ENSORLG00000014385	-	100	90.092	ENSXMAG00000008030	zgc:110045	100	90.092	Xiphophorus_maculatus