EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000014390 (Gene tree)
Gene ID: -
Gene Symbol: GFI1B
Alias: -
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 3809 bases
Position: chr12:27416515-27420323
Accession: 101175581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000018038	zf-C2H2	PF00096.26	1.1e-17	1	3
ENSORLP00000018038	zf-C2H2	PF00096.26	1.1e-17	2	3
ENSORLP00000018038	zf-C2H2	PF00096.26	1.1e-17	3	3
ENSORLP00000035021	zf-C2H2	PF00096.26	1e-16	1	4
ENSORLP00000035021	zf-C2H2	PF00096.26	1e-16	2	4
ENSORLP00000035021	zf-C2H2	PF00096.26	1e-16	3	4
ENSORLP00000035021	zf-C2H2	PF00096.26	1e-16	4	4
ENSORLP00000035086	zf-C2H2	PF00096.26	1.7e-16	1	3
ENSORLP00000035086	zf-C2H2	PF00096.26	1.7e-16	2	3
ENSORLP00000035086	zf-C2H2	PF00096.26	1.7e-16	3	3
ENSORLP00000035021	zf-met	PF12874.7	1.8e-06	1	2
ENSORLP00000035021	zf-met	PF12874.7	1.8e-06	2	2
ENSORLP00000035086	zf-met	PF12874.7	2.5e-06	1	2
ENSORLP00000035086	zf-met	PF12874.7	2.5e-06	2	2
ENSORLP00000018038	zf-met	PF12874.7	0.00057	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000018039	GFI1B-203	846	-	ENSORLP00000018038	281 (aa)	-	H2MHD3
ENSORLT00000038900	GFI1B-201	2623	XM_023961064	ENSORLP00000035021	286 (aa)	XP_023816832	-
ENSORLT00000037915	GFI1B-202	2202	-	ENSORLP00000035086	303 (aa)	-	-

Gene Model

Click here to download ENSORLG00000014390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000014390's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000014390	GFI1B	74	43.966	ENSORLG00000006966	-	92	44.944
ENSORLG00000014390	GFI1B	53	47.059	ENSORLG00000000197	-	82	47.059
ENSORLG00000014390	GFI1B	54	50.000	ENSORLG00000027982	-	97	46.154
ENSORLG00000014390	GFI1B	59	38.889	ENSORLG00000010117	-	68	38.889
ENSORLG00000014390	GFI1B	62	43.363	ENSORLG00000022699	-	85	46.809
ENSORLG00000014390	GFI1B	83	42.718	ENSORLG00000002268	-	79	41.489
ENSORLG00000014390	GFI1B	96	43.114	ENSORLG00000013806	gfi1ab	99	43.114
ENSORLG00000014390	GFI1B	62	41.129	ENSORLG00000027822	-	93	44.643
ENSORLG00000014390	GFI1B	57	43.363	ENSORLG00000023497	-	59	43.363
ENSORLG00000014390	GFI1B	93	41.667	ENSORLG00000029343	-	93	41.667
ENSORLG00000014390	GFI1B	50	42.857	ENSORLG00000022350	-	67	42.857
ENSORLG00000014390	GFI1B	86	44.578	ENSORLG00000007263	-	83	44.578
ENSORLG00000014390	GFI1B	87	43.966	ENSORLG00000025080	-	88	48.864
ENSORLG00000014390	GFI1B	53	47.917	ENSORLG00000029027	-	89	47.917
ENSORLG00000014390	GFI1B	53	48.315	ENSORLG00000028567	-	79	48.315
ENSORLG00000014390	GFI1B	53	46.535	ENSORLG00000023744	-	75	46.535
ENSORLG00000014390	GFI1B	59	41.379	ENSORLG00000026520	-	86	46.847
ENSORLG00000014390	GFI1B	53	45.902	ENSORLG00000012485	-	53	48.361
ENSORLG00000014390	GFI1B	50	42.478	ENSORLG00000012610	znf710b	51	42.478
ENSORLG00000014390	GFI1B	53	43.103	ENSORLG00000007009	-	90	47.826
ENSORLG00000014390	GFI1B	55	43.636	ENSORLG00000028456	-	63	46.067
ENSORLG00000014390	GFI1B	89	40.845	ENSORLG00000024652	-	95	46.602
ENSORLG00000014390	GFI1B	50	40.678	ENSORLG00000012434	znf1064	51	43.689
ENSORLG00000014390	GFI1B	52	42.727	ENSORLG00000029172	-	63	46.847
ENSORLG00000014390	GFI1B	53	47.191	ENSORLG00000027575	-	65	47.191
ENSORLG00000014390	GFI1B	54	47.000	ENSORLG00000027271	-	87	47.000
ENSORLG00000014390	GFI1B	51	46.316	ENSORLG00000028091	-	86	47.191
ENSORLG00000014390	GFI1B	64	44.660	ENSORLG00000028433	-	86	44.660
ENSORLG00000014390	GFI1B	50	33.333	ENSORLG00000029270	-	74	42.727
ENSORLG00000014390	GFI1B	59	41.667	ENSORLG00000002307	-	96	44.444
ENSORLG00000014390	GFI1B	88	38.636	ENSORLG00000027418	-	64	38.636
ENSORLG00000014390	GFI1B	57	42.105	ENSORLG00000027967	-	82	44.248
ENSORLG00000014390	GFI1B	79	41.732	ENSORLG00000012472	znf319b	85	46.591
ENSORLG00000014390	GFI1B	52	45.133	ENSORLG00000024896	-	72	45.133
ENSORLG00000014390	GFI1B	50	45.133	ENSORLG00000024399	-	99	43.678
ENSORLG00000014390	GFI1B	54	45.133	ENSORLG00000023828	-	58	42.241
ENSORLG00000014390	GFI1B	55	51.485	ENSORLG00000027767	-	70	51.485
ENSORLG00000014390	GFI1B	52	44.318	ENSORLG00000000076	ZNF319	79	45.455
ENSORLG00000014390	GFI1B	64	43.478	ENSORLG00000000253	-	99	45.588
ENSORLG00000014390	GFI1B	92	53.165	ENSORLG00000024174	-	91	48.913
ENSORLG00000014390	GFI1B	51	44.000	ENSORLG00000030630	-	84	47.788
ENSORLG00000014390	GFI1B	66	36.250	ENSORLG00000009152	zbtb41	72	36.250
ENSORLG00000014390	GFI1B	54	47.706	ENSORLG00000000247	-	61	47.706
ENSORLG00000014390	GFI1B	55	42.742	ENSORLG00000029896	-	69	47.573
ENSORLG00000014390	GFI1B	53	42.857	ENSORLG00000000557	-	80	42.857
ENSORLG00000014390	GFI1B	53	40.179	ENSORLG00000027974	-	70	46.789
ENSORLG00000014390	GFI1B	51	34.247	ENSORLG00000009246	-	61	34.146
ENSORLG00000014390	GFI1B	58	44.318	ENSORLG00000026811	-	67	44.318
ENSORLG00000014390	GFI1B	50	46.903	ENSORLG00000030610	-	57	46.903
ENSORLG00000014390	GFI1B	58	39.130	ENSORLG00000021885	-	62	51.724
ENSORLG00000014390	GFI1B	53	46.018	ENSORLG00000022704	-	59	44.444
ENSORLG00000014390	GFI1B	70	42.241	ENSORLG00000027303	-	78	42.241
ENSORLG00000014390	GFI1B	89	44.144	ENSORLG00000028381	-	95	44.144
ENSORLG00000014390	GFI1B	53	35.294	ENSORLG00000025719	-	53	45.763
ENSORLG00000014390	GFI1B	53	40.698	ENSORLG00000011040	-	88	51.064
ENSORLG00000014390	GFI1B	53	44.037	ENSORLG00000021951	-	60	44.037
ENSORLG00000014390	GFI1B	53	47.368	ENSORLG00000023086	-	80	47.368
ENSORLG00000014390	GFI1B	53	48.544	ENSORLG00000000420	-	81	48.544
ENSORLG00000014390	GFI1B	53	51.429	ENSORLG00000029814	-	74	51.429
ENSORLG00000014390	GFI1B	53	48.913	ENSORLG00000023806	-	98	42.241
ENSORLG00000014390	GFI1B	52	40.000	ENSORLG00000027765	-	85	40.777
ENSORLG00000014390	GFI1B	50	43.103	ENSORLG00000007097	-	96	50.000
ENSORLG00000014390	GFI1B	54	45.631	ENSORLG00000025576	-	92	45.631
ENSORLG00000014390	GFI1B	53	46.429	ENSORLG00000001749	-	90	45.283
ENSORLG00000014390	GFI1B	54	46.903	ENSORLG00000025717	-	91	43.023
ENSORLG00000014390	GFI1B	53	49.515	ENSORLG00000026852	-	70	49.515
ENSORLG00000014390	GFI1B	93	41.905	ENSORLG00000028323	-	95	46.847
ENSORLG00000014390	GFI1B	88	38.136	ENSORLG00000023094	-	77	38.136
ENSORLG00000014390	GFI1B	54	44.660	ENSORLG00000026684	-	70	44.660

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000014390	GFI1B	96	71.168	ENSAPOG00000001296	gfi1b	84	71.168	Acanthochromis_polyacanthus
ENSORLG00000014390	GFI1B	96	62.182	ENSACIG00000002190	gfi1b	100	54.829	Amphilophus_citrinellus
ENSORLG00000014390	GFI1B	96	71.533	ENSAOCG00000021187	gfi1b	84	71.533	Amphiprion_ocellaris
ENSORLG00000014390	GFI1B	96	71.898	ENSAPEG00000016196	gfi1b	100	59.062	Amphiprion_percula
ENSORLG00000014390	GFI1B	96	76.534	ENSATEG00000002534	gfi1b	84	76.534	Anabas_testudineus
ENSORLG00000014390	GFI1B	96	49.474	ENSAPLG00000003373	GFI1B	100	45.401	Anas_platyrhynchos
ENSORLG00000014390	GFI1B	96	65.217	ENSACLG00000027053	gfi1b	100	56.098	Astatotilapia_calliptera
ENSORLG00000014390	GFI1B	96	60.915	ENSAMXG00000037544	GFI1B	100	52.679	Astyanax_mexicanus
ENSORLG00000014390	GFI1B	100	47.493	ENSCAPG00000010404	GFI1B	100	92.035	Cavia_aperea
ENSORLG00000014390	GFI1B	96	48.814	ENSCPBG00000021186	GFI1B	100	44.092	Chrysemys_picta_bellii
ENSORLG00000014390	GFI1B	96	71.377	ENSCSEG00000001315	gfi1b	84	71.377	Cynoglossus_semilaevis
ENSORLG00000014390	GFI1B	96	68.613	ENSCVAG00000017168	gfi1b	83	68.613	Cyprinodon_variegatus
ENSORLG00000014390	GFI1B	96	58.054	ENSDARG00000079947	gfi1b	99	62.025	Danio_rerio
ENSORLG00000014390	GFI1B	96	64.211	ENSELUG00000016933	gfi1b	100	56.083	Esox_lucius
ENSORLG00000014390	GFI1B	96	46.645	ENSFALG00000001479	GFI1B	100	81.538	Ficedula_albicollis
ENSORLG00000014390	GFI1B	96	75.000	ENSFHEG00000015138	gfi1b	84	75.000	Fundulus_heteroclitus
ENSORLG00000014390	GFI1B	100	53.271	ENSGMOG00000019123	gfi1b	100	53.271	Gadus_morhua
ENSORLG00000014390	GFI1B	96	49.826	ENSGALG00000003478	GFI1B	100	45.133	Gallus_gallus
ENSORLG00000014390	GFI1B	64	86.264	ENSGAFG00000003059	gfi1b	100	69.658	Gambusia_affinis
ENSORLG00000014390	GFI1B	93	66.090	ENSGACG00000018134	gfi1b	83	66.090	Gasterosteus_aculeatus
ENSORLG00000014390	GFI1B	96	50.704	ENSGAGG00000021327	GFI1B	100	45.373	Gopherus_agassizii
ENSORLG00000014390	GFI1B	96	65.217	ENSHBUG00000005451	gfi1b	100	56.098	Haplochromis_burtoni
ENSORLG00000014390	GFI1B	96	67.754	ENSHCOG00000013713	gfi1b	100	59.938	Hippocampus_comes
ENSORLG00000014390	GFI1B	96	61.168	ENSIPUG00000012769	gfi1b	100	55.193	Ictalurus_punctatus
ENSORLG00000014390	GFI1B	95	45.652	ENSJJAG00000016355	Gfi1b	100	90.265	Jaculus_jaculus
ENSORLG00000014390	GFI1B	96	71.480	ENSKMAG00000016047	gfi1b	84	71.480	Kryptolebias_marmoratus
ENSORLG00000014390	GFI1B	96	68.440	ENSLBEG00000020297	gfi1b	99	58.125	Labrus_bergylta
ENSORLG00000014390	GFI1B	96	52.982	ENSLACG00000012207	GFI1B	100	48.503	Latimeria_chalumnae
ENSORLG00000014390	GFI1B	96	60.351	ENSLOCG00000005750	gfi1b	100	53.982	Lepisosteus_oculatus
ENSORLG00000014390	GFI1B	100	46.547	ENSLAFG00000022367	GFI1B	98	51.264	Loxodonta_africana
ENSORLG00000014390	GFI1B	96	74.820	ENSMAMG00000003040	gfi1b	100	61.801	Mastacembelus_armatus
ENSORLG00000014390	GFI1B	96	64.855	ENSMZEG00005015594	gfi1b	99	55.963	Maylandia_zebra
ENSORLG00000014390	GFI1B	96	49.477	ENSMGAG00000006129	GFI1B	100	44.838	Meleagris_gallopavo
ENSORLG00000014390	GFI1B	96	70.758	ENSMMOG00000011764	gfi1b	100	59.202	Mola_mola
ENSORLG00000014390	GFI1B	96	45.000	ENSMODG00000012600	GFI1B	100	92.793	Monodelphis_domestica
ENSORLG00000014390	GFI1B	96	71.014	ENSMALG00000004034	gfi1b	84	71.014	Monopterus_albus
ENSORLG00000014390	GFI1B	96	50.714	ENSNGAG00000003333	Gfi1b	100	90.265	Nannospalax_galili
ENSORLG00000014390	GFI1B	96	64.260	ENSNBRG00000012391	gfi1b	100	55.319	Neolamprologus_brichardi
ENSORLG00000014390	GFI1B	96	64.621	ENSONIG00000013011	gfi1b	91	91.803	Oreochromis_niloticus
ENSORLG00000014390	GFI1B	96	53.025	ENSOANG00000014723	GFI1B	100	47.147	Ornithorhynchus_anatinus
ENSORLG00000014390	GFI1B	96	97.080	ENSORLG00020003719	GFI1B	84	97.080	Oryzias_latipes_hni
ENSORLG00000014390	GFI1B	96	96.350	ENSORLG00015017142	gfi1b	84	96.350	Oryzias_latipes_hsok
ENSORLG00000014390	GFI1B	96	87.591	ENSOMEG00000015149	GFI1B	84	87.591	Oryzias_melastigma
ENSORLG00000014390	GFI1B	100	46.567	ENSOGAG00000008879	GFI1B	100	46.866	Otolemur_garnettii
ENSORLG00000014390	GFI1B	96	61.189	ENSPKIG00000007643	gfi1b	100	54.167	Paramormyrops_kingsleyae
ENSORLG00000014390	GFI1B	96	51.351	ENSPSIG00000012112	GFI1B	100	46.686	Pelodiscus_sinensis
ENSORLG00000014390	GFI1B	96	60.854	ENSPMGG00000006021	gfi1b	98	61.922	Periophthalmus_magnuspinnatus
ENSORLG00000014390	GFI1B	96	44.479	ENSPCIG00000019724	GFI1B	100	91.150	Phascolarctos_cinereus
ENSORLG00000014390	GFI1B	96	72.695	ENSPFOG00000003460	gfi1b	94	70.093	Poecilia_formosa
ENSORLG00000014390	GFI1B	96	73.913	ENSPLAG00000021960	GFI1B	100	63.110	Poecilia_latipinna
ENSORLG00000014390	GFI1B	96	71.678	ENSPLAG00000017181	GFI1B	85	71.678	Poecilia_latipinna
ENSORLG00000014390	GFI1B	96	73.913	ENSPMEG00000001556	GFI1B	100	63.110	Poecilia_mexicana
ENSORLG00000014390	GFI1B	96	73.913	ENSPMEG00000019220	gfi1b	100	63.110	Poecilia_mexicana
ENSORLG00000014390	GFI1B	96	74.275	ENSPREG00000021718	gfi1b	100	59.639	Poecilia_reticulata
ENSORLG00000014390	GFI1B	96	64.130	ENSPNYG00000018422	gfi1b	100	55.864	Pundamilia_nyererei
ENSORLG00000014390	GFI1B	96	60.627	ENSPNAG00000021118	gfi1b	100	53.392	Pygocentrus_nattereri
ENSORLG00000014390	GFI1B	93	44.795	ENSSHAG00000006462	GFI1B	100	77.193	Sarcophilus_harrisii
ENSORLG00000014390	GFI1B	95	61.268	ENSSFOG00015011566	gfi1b	90	61.268	Scleropages_formosus
ENSORLG00000014390	GFI1B	96	72.563	ENSSMAG00000015181	gfi1b	90	73.801	Scophthalmus_maximus
ENSORLG00000014390	GFI1B	96	75.000	ENSSDUG00000011604	gfi1b	84	75.000	Seriola_dumerili
ENSORLG00000014390	GFI1B	96	74.275	ENSSLDG00000013823	gfi1b	84	74.275	Seriola_lalandi_dorsalis
ENSORLG00000014390	GFI1B	100	46.628	ENSSPUG00000016039	GFI1B	100	46.628	Sphenodon_punctatus
ENSORLG00000014390	GFI1B	96	70.803	ENSSPAG00000022914	gfi1b	84	70.803	Stegastes_partitus
ENSORLG00000014390	GFI1B	96	69.203	ENSTRUG00000004525	gfi1b	100	60.366	Takifugu_rubripes
ENSORLG00000014390	GFI1B	96	68.953	ENSTNIG00000003834	gfi1b	100	60.366	Tetraodon_nigroviridis
ENSORLG00000014390	GFI1B	100	87.931	ENSTBEG00000014459	GFI1B	83	87.931	Tupaia_belangeri
ENSORLG00000014390	GFI1B	96	49.141	ENSXETG00000006263	gfi1b	98	50.699	Xenopus_tropicalis
ENSORLG00000014390	GFI1B	96	74.638	ENSXMAG00000027589	gfi1b	100	63.415	Xiphophorus_maculatus