EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000014580 (Gene tree)
Gene ID: 101154870
Gene Symbol: polr2f
Alias: -
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 2838 bases
Position: chr8:19814723-19817560
Accession: 101154870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000018281	RNA_pol_Rpb6	PF01192.22	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000018282	-	1135	XM_004071796	ENSORLP00000018281	127 (aa)	XP_004071844	H2MI10

Gene Model

Click here to download ENSORLG00000014580's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03020	RNA polymerase	KEGG
ola04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000014580's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000014580	polr2f	100	87.402	ENSG00000100142	POLR2F	100	87.402	Homo_sapiens
ENSORLG00000014580	polr2f	100	96.850	ENSAPOG00000002902	polr2f	100	96.850	Acanthochromis_polyacanthus
ENSORLG00000014580	polr2f	100	86.614	ENSAMEG00000010331	POLR2F	100	86.614	Ailuropoda_melanoleuca
ENSORLG00000014580	polr2f	100	96.850	ENSACIG00000000923	polr2f	100	96.850	Amphilophus_citrinellus
ENSORLG00000014580	polr2f	100	97.638	ENSAOCG00000003182	polr2f	100	97.638	Amphiprion_ocellaris
ENSORLG00000014580	polr2f	100	97.638	ENSAPEG00000012999	polr2f	100	97.638	Amphiprion_percula
ENSORLG00000014580	polr2f	100	96.850	ENSATEG00000008929	polr2f	100	96.850	Anabas_testudineus
ENSORLG00000014580	polr2f	80	89.109	ENSAPLG00000015235	POLR2F	100	83.200	Anas_platyrhynchos
ENSORLG00000014580	polr2f	100	88.189	ENSACAG00000015288	POLR2F	100	88.189	Anolis_carolinensis
ENSORLG00000014580	polr2f	100	87.402	ENSANAG00000020840	POLR2F	100	87.402	Aotus_nancymaae
ENSORLG00000014580	polr2f	100	96.063	ENSACLG00000016129	polr2f	100	96.063	Astatotilapia_calliptera
ENSORLG00000014580	polr2f	100	96.063	ENSAMXG00000012812	polr2f	100	96.063	Astyanax_mexicanus
ENSORLG00000014580	polr2f	100	87.402	ENSBTAG00000004820	POLR2F	100	87.402	Bos_taurus
ENSORLG00000014580	polr2f	63	77.500	WBGene00007355	rpb-6	92	60.630	Caenorhabditis_elegans
ENSORLG00000014580	polr2f	100	87.402	ENSCJAG00000048241	POLR2F	100	87.402	Callithrix_jacchus
ENSORLG00000014580	polr2f	100	86.614	ENSCAFG00000001437	POLR2F	100	86.614	Canis_familiaris
ENSORLG00000014580	polr2f	83	89.623	ENSCHIG00000012907	POLR2F	95	85.950	Capra_hircus
ENSORLG00000014580	polr2f	100	86.614	ENSTSYG00000008187	POLR2F	100	86.614	Carlito_syrichta
ENSORLG00000014580	polr2f	83	89.623	ENSCAPG00000013419	POLR2F	94	86.667	Cavia_aperea
ENSORLG00000014580	polr2f	100	87.402	ENSCPOG00000034094	POLR2F	100	87.402	Cavia_porcellus
ENSORLG00000014580	polr2f	100	87.402	ENSCCAG00000036489	POLR2F	100	87.402	Cebus_capucinus
ENSORLG00000014580	polr2f	100	87.402	ENSCATG00000041014	POLR2F	100	87.402	Cercocebus_atys
ENSORLG00000014580	polr2f	100	87.402	ENSCLAG00000017167	POLR2F	100	87.402	Chinchilla_lanigera
ENSORLG00000014580	polr2f	100	87.402	ENSCSAG00000006862	POLR2F	100	87.402	Chlorocebus_sabaeus
ENSORLG00000014580	polr2f	83	90.566	ENSCPBG00000023030	POLR2F	62	86.777	Chrysemys_picta_bellii
ENSORLG00000014580	polr2f	81	75.962	ENSCING00000019359	-	90	67.939	Ciona_intestinalis
ENSORLG00000014580	polr2f	100	87.402	ENSCANG00000041884	POLR2F	100	87.402	Colobus_angolensis_palliatus
ENSORLG00000014580	polr2f	100	87.402	ENSCGRG00001023541	POLR2F	100	87.402	Cricetulus_griseus_chok1gshd
ENSORLG00000014580	polr2f	100	87.402	ENSCGRG00000011921	POLR2F	100	87.402	Cricetulus_griseus_crigri
ENSORLG00000014580	polr2f	95	96.694	ENSCSEG00000006848	polr2f	95	96.694	Cynoglossus_semilaevis
ENSORLG00000014580	polr2f	100	96.063	ENSCVAG00000010437	polr2f	100	96.063	Cyprinodon_variegatus
ENSORLG00000014580	polr2f	100	93.701	ENSDARG00000036625	polr2f	100	93.701	Danio_rerio
ENSORLG00000014580	polr2f	100	87.402	ENSDNOG00000005884	POLR2F	100	87.402	Dasypus_novemcinctus
ENSORLG00000014580	polr2f	100	87.402	ENSDORG00000024789	Polr2f	100	87.402	Dipodomys_ordii
ENSORLG00000014580	polr2f	78	69.608	FBgn0003275	RpII18	95	67.188	Drosophila_melanogaster
ENSORLG00000014580	polr2f	77	67.347	ENSEBUG00000002842	-	98	58.400	Eptatretus_burgeri
ENSORLG00000014580	polr2f	54	83.824	ENSEBUG00000008509	polr2f	70	83.824	Eptatretus_burgeri
ENSORLG00000014580	polr2f	60	86.842	ENSEASG00005018802	-	82	82.418	Equus_asinus_asinus
ENSORLG00000014580	polr2f	100	85.039	ENSEEUG00000011014	POLR2F	100	85.039	Erinaceus_europaeus
ENSORLG00000014580	polr2f	100	93.701	ENSELUG00000000319	polr2f	100	93.701	Esox_lucius
ENSORLG00000014580	polr2f	100	86.614	ENSFCAG00000002806	POLR2F	100	86.614	Felis_catus
ENSORLG00000014580	polr2f	100	87.402	ENSFDAG00000009926	POLR2F	100	87.402	Fukomys_damarensis
ENSORLG00000014580	polr2f	88	96.429	ENSFHEG00000005448	polr2f	100	95.276	Fundulus_heteroclitus
ENSORLG00000014580	polr2f	100	86.614	ENSGMOG00000009967	polr2f	100	86.614	Gadus_morhua
ENSORLG00000014580	polr2f	100	88.189	ENSGALG00000012291	POLR2F	100	88.189	Gallus_gallus
ENSORLG00000014580	polr2f	100	95.276	ENSGAFG00000017573	polr2f	100	95.276	Gambusia_affinis
ENSORLG00000014580	polr2f	100	92.913	ENSGACG00000007322	polr2f	100	92.913	Gasterosteus_aculeatus
ENSORLG00000014580	polr2f	100	88.189	ENSGAGG00000021757	POLR2F	100	88.189	Gopherus_agassizii
ENSORLG00000014580	polr2f	100	87.402	ENSGGOG00000005213	POLR2F	100	87.402	Gorilla_gorilla
ENSORLG00000014580	polr2f	100	96.063	ENSHBUG00000022089	polr2f	100	96.063	Haplochromis_burtoni
ENSORLG00000014580	polr2f	100	87.402	ENSHGLG00000018942	POLR2F	100	87.402	Heterocephalus_glaber_female
ENSORLG00000014580	polr2f	100	87.402	ENSHGLG00100012851	POLR2F	100	87.402	Heterocephalus_glaber_male
ENSORLG00000014580	polr2f	100	92.126	ENSHCOG00000006149	polr2f	100	92.126	Hippocampus_comes
ENSORLG00000014580	polr2f	76	97.938	ENSIPUG00000000814	polr2f	100	97.938	Ictalurus_punctatus
ENSORLG00000014580	polr2f	100	87.402	ENSSTOG00000025722	POLR2F	100	87.402	Ictidomys_tridecemlineatus
ENSORLG00000014580	polr2f	100	87.402	ENSJJAG00000008097	Polr2f	100	87.402	Jaculus_jaculus
ENSORLG00000014580	polr2f	100	95.276	ENSKMAG00000014230	polr2f	100	95.276	Kryptolebias_marmoratus
ENSORLG00000014580	polr2f	83	95.283	ENSLBEG00000008383	polr2f	100	93.333	Labrus_bergylta
ENSORLG00000014580	polr2f	100	89.764	ENSLACG00000003931	POLR2F	100	89.764	Latimeria_chalumnae
ENSORLG00000014580	polr2f	100	93.846	ENSLOCG00000011827	polr2f	100	93.846	Lepisosteus_oculatus
ENSORLG00000014580	polr2f	100	87.402	ENSLAFG00000012632	POLR2F	100	87.402	Loxodonta_africana
ENSORLG00000014580	polr2f	100	87.402	ENSMFAG00000033687	POLR2F	100	87.402	Macaca_fascicularis
ENSORLG00000014580	polr2f	83	89.623	ENSMMUG00000038231	POLR2F	99	85.950	Macaca_mulatta
ENSORLG00000014580	polr2f	100	87.402	ENSMNEG00000044365	POLR2F	100	87.402	Macaca_nemestrina
ENSORLG00000014580	polr2f	100	87.402	ENSMLEG00000033077	POLR2F	100	87.402	Mandrillus_leucophaeus
ENSORLG00000014580	polr2f	100	96.063	ENSMAMG00000008056	polr2f	100	96.063	Mastacembelus_armatus
ENSORLG00000014580	polr2f	100	96.063	ENSMZEG00005005705	polr2f	100	96.063	Maylandia_zebra
ENSORLG00000014580	polr2f	100	88.189	ENSMGAG00000012504	POLR2F	100	88.189	Meleagris_gallopavo
ENSORLG00000014580	polr2f	100	87.402	ENSMAUG00000018586	Polr2f	100	87.402	Mesocricetus_auratus
ENSORLG00000014580	polr2f	100	87.402	ENSMICG00000013128	POLR2F	100	87.402	Microcebus_murinus
ENSORLG00000014580	polr2f	100	87.402	ENSMOCG00000000237	Polr2f	100	87.402	Microtus_ochrogaster
ENSORLG00000014580	polr2f	100	97.638	ENSMMOG00000005106	polr2f	100	97.638	Mola_mola
ENSORLG00000014580	polr2f	100	87.402	ENSMODG00000019063	POLR2F	100	87.402	Monodelphis_domestica
ENSORLG00000014580	polr2f	100	96.850	ENSMALG00000001444	polr2f	100	96.850	Monopterus_albus
ENSORLG00000014580	polr2f	100	86.614	MGP_CAROLIEiJ_G0020006	Polr2f	100	86.614	Mus_caroli
ENSORLG00000014580	polr2f	100	86.614	ENSMUSG00000033020	Polr2f	100	86.614	Mus_musculus
ENSORLG00000014580	polr2f	100	86.614	MGP_PahariEiJ_G0020008	Polr2f	100	86.614	Mus_pahari
ENSORLG00000014580	polr2f	100	86.614	MGP_SPRETEiJ_G0020904	Polr2f	100	86.614	Mus_spretus
ENSORLG00000014580	polr2f	100	86.614	ENSMPUG00000012997	POLR2F	100	86.614	Mustela_putorius_furo
ENSORLG00000014580	polr2f	98	83.065	ENSMLUG00000029612	-	98	83.065	Myotis_lucifugus
ENSORLG00000014580	polr2f	100	85.271	ENSMLUG00000014315	-	100	85.271	Myotis_lucifugus
ENSORLG00000014580	polr2f	100	87.402	ENSNGAG00000020682	Polr2f	100	87.402	Nannospalax_galili
ENSORLG00000014580	polr2f	100	96.850	ENSNBRG00000002492	polr2f	100	96.850	Neolamprologus_brichardi
ENSORLG00000014580	polr2f	100	87.402	ENSNLEG00000014987	-	100	87.402	Nomascus_leucogenys
ENSORLG00000014580	polr2f	100	87.402	ENSODEG00000014123	POLR2F	100	87.402	Octodon_degus
ENSORLG00000014580	polr2f	100	96.850	ENSONIG00000008394	polr2f	100	96.850	Oreochromis_niloticus
ENSORLG00000014580	polr2f	100	88.189	ENSOANG00000014684	POLR2F	100	88.189	Ornithorhynchus_anatinus
ENSORLG00000014580	polr2f	100	87.402	ENSOCUG00000012064	POLR2F	100	87.402	Oryctolagus_cuniculus
ENSORLG00000014580	polr2f	100	99.213	ENSORLG00020006910	polr2f	100	99.213	Oryzias_latipes_hni
ENSORLG00000014580	polr2f	90	96.491	ENSORLG00015015332	polr2f	77	96.491	Oryzias_latipes_hsok
ENSORLG00000014580	polr2f	80	93.137	ENSOMEG00000006530	polr2f	65	87.273	Oryzias_melastigma
ENSORLG00000014580	polr2f	100	87.402	ENSOGAG00000025463	POLR2F	100	87.402	Otolemur_garnettii
ENSORLG00000014580	polr2f	100	87.402	ENSOARG00000014692	POLR2F	100	87.402	Ovis_aries
ENSORLG00000014580	polr2f	100	87.402	ENSPPAG00000024276	POLR2F	100	87.402	Pan_paniscus
ENSORLG00000014580	polr2f	100	86.614	ENSPPRG00000013030	POLR2F	100	86.614	Panthera_pardus
ENSORLG00000014580	polr2f	82	88.462	ENSPTIG00000000632	POLR2F	99	84.298	Panthera_tigris_altaica
ENSORLG00000014580	polr2f	100	87.402	ENSPTRG00000014356	POLR2F	100	87.402	Pan_troglodytes
ENSORLG00000014580	polr2f	100	87.402	ENSPANG00000023979	POLR2F	100	87.402	Papio_anubis
ENSORLG00000014580	polr2f	100	96.063	ENSPKIG00000002464	polr2f	100	96.063	Paramormyrops_kingsleyae
ENSORLG00000014580	polr2f	56	95.775	ENSPSIG00000013913	POLR2F	100	95.775	Pelodiscus_sinensis
ENSORLG00000014580	polr2f	100	97.638	ENSPMGG00000009619	polr2f	100	97.638	Periophthalmus_magnuspinnatus
ENSORLG00000014580	polr2f	100	87.402	ENSPEMG00000008322	Polr2f	100	87.402	Peromyscus_maniculatus_bairdii
ENSORLG00000014580	polr2f	100	87.402	ENSPCIG00000012000	-	100	87.402	Phascolarctos_cinereus
ENSORLG00000014580	polr2f	100	96.063	ENSPFOG00000000139	polr2f	100	96.063	Poecilia_formosa
ENSORLG00000014580	polr2f	100	96.063	ENSPLAG00000000988	polr2f	100	96.063	Poecilia_latipinna
ENSORLG00000014580	polr2f	100	96.063	ENSPMEG00000019063	polr2f	100	96.063	Poecilia_mexicana
ENSORLG00000014580	polr2f	77	95.918	ENSPREG00000016749	polr2f	100	95.918	Poecilia_reticulata
ENSORLG00000014580	polr2f	100	87.402	ENSPPYG00000011809	POLR2F	100	87.402	Pongo_abelii
ENSORLG00000014580	polr2f	100	87.402	ENSPCOG00000025716	POLR2F	100	87.402	Propithecus_coquereli
ENSORLG00000014580	polr2f	79	84.000	ENSPVAG00000010107	POLR2F	64	84.000	Pteropus_vampyrus
ENSORLG00000014580	polr2f	100	96.063	ENSPNYG00000019790	polr2f	100	96.063	Pundamilia_nyererei
ENSORLG00000014580	polr2f	100	96.850	ENSPNAG00000009017	polr2f	100	96.850	Pygocentrus_nattereri
ENSORLG00000014580	polr2f	100	86.614	ENSRNOG00000011214	Polr2f	100	86.614	Rattus_norvegicus
ENSORLG00000014580	polr2f	100	87.402	ENSRBIG00000044878	POLR2F	100	87.402	Rhinopithecus_bieti
ENSORLG00000014580	polr2f	100	87.402	ENSRROG00000019586	POLR2F	100	87.402	Rhinopithecus_roxellana
ENSORLG00000014580	polr2f	98	50.327	YPR187W	RPO26	99	50.327	Saccharomyces_cerevisiae
ENSORLG00000014580	polr2f	100	87.402	ENSSBOG00000023340	POLR2F	100	87.402	Saimiri_boliviensis_boliviensis
ENSORLG00000014580	polr2f	100	87.402	ENSSHAG00000008502	POLR2F	100	87.402	Sarcophilus_harrisii
ENSORLG00000014580	polr2f	100	95.276	ENSSFOG00015012810	polr2f	100	95.276	Scleropages_formosus
ENSORLG00000014580	polr2f	100	96.850	ENSSMAG00000005354	polr2f	100	96.850	Scophthalmus_maximus
ENSORLG00000014580	polr2f	100	97.638	ENSSDUG00000016273	polr2f	100	97.638	Seriola_dumerili
ENSORLG00000014580	polr2f	100	97.638	ENSSLDG00000024895	polr2f	100	97.638	Seriola_lalandi_dorsalis
ENSORLG00000014580	polr2f	100	88.189	ENSSPUG00000011343	POLR2F	100	88.189	Sphenodon_punctatus
ENSORLG00000014580	polr2f	100	96.063	ENSSPAG00000019646	polr2f	100	96.063	Stegastes_partitus
ENSORLG00000014580	polr2f	100	86.614	ENSSSCG00000000116	POLR2F	100	86.614	Sus_scrofa
ENSORLG00000014580	polr2f	57	88.889	ENSTGUG00000016504	-	99	86.207	Taeniopygia_guttata
ENSORLG00000014580	polr2f	80	90.099	ENSTGUG00000010476	POLR2F	93	87.402	Taeniopygia_guttata
ENSORLG00000014580	polr2f	100	96.850	ENSTRUG00000021130	polr2f	71	96.850	Takifugu_rubripes
ENSORLG00000014580	polr2f	100	96.850	ENSTNIG00000010827	polr2f	100	96.850	Tetraodon_nigroviridis
ENSORLG00000014580	polr2f	79	84.000	ENSTTRG00000004817	POLR2F	64	84.000	Tursiops_truncatus
ENSORLG00000014580	polr2f	100	86.614	ENSUAMG00000020504	POLR2F	100	86.614	Ursus_americanus
ENSORLG00000014580	polr2f	100	86.614	ENSUMAG00000015052	POLR2F	100	86.614	Ursus_maritimus
ENSORLG00000014580	polr2f	83	88.679	ENSVVUG00000024021	POLR2F	92	85.124	Vulpes_vulpes
ENSORLG00000014580	polr2f	100	88.976	ENSXETG00000006346	polr2f	100	88.976	Xenopus_tropicalis
ENSORLG00000014580	polr2f	100	96.063	ENSXCOG00000015983	polr2f	100	96.063	Xiphophorus_couchianus
ENSORLG00000014580	polr2f	100	96.063	ENSXMAG00000001559	polr2f	100	96.063	Xiphophorus_maculatus