EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000014676 (Gene tree)
Gene ID: 101163921
Gene Symbol: srpra
Alias: -
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 13846 bases
Position: chr13:28750826-28764671
Accession: 101163921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000018397	SRP54	PF00448.22	7.9e-48	1	1
ENSORLP00000045509	SRP54	PF00448.22	1.1e-47	1	1
ENSORLP00000018397	SRP54_N	PF02881.19	1.6e-10	1	1
ENSORLP00000045509	SRP54_N	PF02881.19	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000033228	-	5303	XM_004075877	ENSORLP00000045509	643 (aa)	XP_004075925	UPI0002A4866B
ENSORLT00000018398	-	1692	-	ENSORLP00000018397	563 (aa)	-	H2MIC2

Gene Model

Click here to download ENSORLG00000014676's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000014676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000014676	srpra	100	68.405	ENSG00000182934	SRPRA	85	86.349	Homo_sapiens
ENSORLG00000014676	srpra	100	85.231	ENSAPOG00000017588	srpra	100	86.462	Acanthochromis_polyacanthus
ENSORLG00000014676	srpra	100	68.405	ENSAMEG00000000117	SRPRA	100	67.485	Ailuropoda_melanoleuca
ENSORLG00000014676	srpra	95	90.909	ENSACIG00000021588	srpra	100	81.538	Amphilophus_citrinellus
ENSORLG00000014676	srpra	100	85.692	ENSAOCG00000018884	srpra	100	86.923	Amphiprion_ocellaris
ENSORLG00000014676	srpra	100	85.692	ENSAPEG00000022286	srpra	92	86.923	Amphiprion_percula
ENSORLG00000014676	srpra	94	94.529	ENSATEG00000023578	srpra	92	94.603	Anabas_testudineus
ENSORLG00000014676	srpra	86	88.854	ENSAPLG00000016079	SRPRA	99	70.772	Anas_platyrhynchos
ENSORLG00000014676	srpra	90	89.172	ENSACAG00000000108	SRPRA	83	89.206	Anolis_carolinensis
ENSORLG00000014676	srpra	100	67.791	ENSANAG00000020346	SRPRA	86	86.032	Aotus_nancymaae
ENSORLG00000014676	srpra	95	96.061	ENSACLG00000000518	srpra	100	83.692	Astatotilapia_calliptera
ENSORLG00000014676	srpra	100	72.784	ENSAMXG00000009975	srpra	100	73.250	Astyanax_mexicanus
ENSORLG00000014676	srpra	100	67.331	ENSBTAG00000014105	SRPRA	86	86.032	Bos_taurus
ENSORLG00000014676	srpra	94	70.625	WBGene00009521	F38A1.8	88	70.701	Caenorhabditis_elegans
ENSORLG00000014676	srpra	100	67.692	ENSCJAG00000008752	SRPRA	86	86.032	Callithrix_jacchus
ENSORLG00000014676	srpra	100	67.025	ENSCAFG00000010474	SRPRA	100	66.258	Canis_familiaris
ENSORLG00000014676	srpra	100	68.712	ENSCAFG00020010608	SRPRA	100	67.945	Canis_lupus_dingo
ENSORLG00000014676	srpra	100	68.550	ENSCHIG00000012423	SRPRA	100	65.425	Capra_hircus
ENSORLG00000014676	srpra	90	81.180	ENSTSYG00000005187	SRPRA	100	64.425	Carlito_syrichta
ENSORLG00000014676	srpra	95	64.773	ENSCAPG00000007098	SRPRA	91	88.722	Cavia_aperea
ENSORLG00000014676	srpra	100	68.865	ENSCPOG00000014976	SRPRA	91	88.722	Cavia_porcellus
ENSORLG00000014676	srpra	100	67.945	ENSCCAG00000025602	SRPRA	86	86.032	Cebus_capucinus
ENSORLG00000014676	srpra	100	68.252	ENSCATG00000039354	SRPRA	86	86.349	Cercocebus_atys
ENSORLG00000014676	srpra	100	68.712	ENSCLAG00000016839	SRPRA	100	67.945	Chinchilla_lanigera
ENSORLG00000014676	srpra	100	68.098	ENSCSAG00000002271	SRPRA	86	86.032	Chlorocebus_sabaeus
ENSORLG00000014676	srpra	57	86.735	ENSCHOG00000010015	-	71	86.735	Choloepus_hoffmanni
ENSORLG00000014676	srpra	92	88.217	ENSCPBG00000011128	SRPRA	85	88.254	Chrysemys_picta_bellii
ENSORLG00000014676	srpra	90	77.188	ENSCING00000008954	-	87	77.389	Ciona_intestinalis
ENSORLG00000014676	srpra	91	78.125	ENSCSAVG00000005602	-	85	78.344	Ciona_savignyi
ENSORLG00000014676	srpra	100	68.252	ENSCANG00000032337	SRPRA	100	67.485	Colobus_angolensis_palliatus
ENSORLG00000014676	srpra	100	68.817	ENSCGRG00001017670	Srpr	100	68.510	Cricetulus_griseus_chok1gshd
ENSORLG00000014676	srpra	100	68.817	ENSCGRG00000009892	Srpr	90	88.889	Cricetulus_griseus_crigri
ENSORLG00000014676	srpra	95	93.921	ENSCSEG00000002374	srpra	100	83.129	Cynoglossus_semilaevis
ENSORLG00000014676	srpra	95	95.441	ENSCVAG00000019881	srpra	100	82.669	Cyprinodon_variegatus
ENSORLG00000014676	srpra	94	93.558	ENSDARG00000061124	srpra	84	93.968	Danio_rerio
ENSORLG00000014676	srpra	100	67.781	ENSDNOG00000010821	SRPRA	100	66.261	Dasypus_novemcinctus
ENSORLG00000014676	srpra	100	68.817	ENSDORG00000016719	Srpr	86	86.984	Dipodomys_ordii
ENSORLG00000014676	srpra	99	52.542	FBgn0010391	Gtp-bp	84	74.204	Drosophila_melanogaster
ENSORLG00000014676	srpra	100	66.667	ENSETEG00000013956	SRPRA	89	86.349	Echinops_telfairi
ENSORLG00000014676	srpra	58	82.716	ENSEBUG00000002602	srpra	92	68.646	Eptatretus_burgeri
ENSORLG00000014676	srpra	100	68.203	ENSEASG00005022980	SRPRA	100	65.172	Equus_asinus_asinus
ENSORLG00000014676	srpra	100	68.203	ENSECAG00000014692	SRPRA	100	65.172	Equus_caballus
ENSORLG00000014676	srpra	100	63.692	ENSEEUG00000007920	SRPRA	86	85.397	Erinaceus_europaeus
ENSORLG00000014676	srpra	91	96.190	ENSELUG00000017643	srpra	100	83.564	Esox_lucius
ENSORLG00000014676	srpra	100	68.702	ENSFCAG00000011274	-	100	67.431	Felis_catus
ENSORLG00000014676	srpra	80	62.998	ENSFCAG00000030894	-	99	61.407	Felis_catus
ENSORLG00000014676	srpra	83	88.854	ENSFALG00000005048	SRPRA	99	67.445	Ficedula_albicollis
ENSORLG00000014676	srpra	100	68.510	ENSFDAG00000016229	SRPRA	92	83.916	Fukomys_damarensis
ENSORLG00000014676	srpra	93	96.508	ENSFHEG00000016959	srpra	100	84.485	Fundulus_heteroclitus
ENSORLG00000014676	srpra	100	79.690	ENSGMOG00000013244	srpra	100	79.225	Gadus_morhua
ENSORLG00000014676	srpra	92	88.535	ENSGALG00000030759	SRPRA	85	88.571	Gallus_gallus
ENSORLG00000014676	srpra	100	85.471	ENSGAFG00000000453	srpra	100	85.626	Gambusia_affinis
ENSORLG00000014676	srpra	93	94.921	ENSGACG00000006550	srpra	100	81.269	Gasterosteus_aculeatus
ENSORLG00000014676	srpra	92	87.898	ENSGAGG00000021157	SRPRA	85	87.937	Gopherus_agassizii
ENSORLG00000014676	srpra	100	68.405	ENSGGOG00000012962	SRPRA	100	67.688	Gorilla_gorilla
ENSORLG00000014676	srpra	95	96.364	ENSHBUG00000000119	srpra	100	83.846	Haplochromis_burtoni
ENSORLG00000014676	srpra	100	68.203	ENSHGLG00000001597	SRPR	94	89.394	Heterocephalus_glaber_female
ENSORLG00000014676	srpra	100	68.203	ENSHGLG00100006449	SRPR	94	89.394	Heterocephalus_glaber_male
ENSORLG00000014676	srpra	100	81.442	ENSHCOG00000010749	srpra	100	81.902	Hippocampus_comes
ENSORLG00000014676	srpra	94	88.393	ENSIPUG00000000867	srpra	84	91.429	Ictalurus_punctatus
ENSORLG00000014676	srpra	100	68.098	ENSSTOG00000009897	SRPRA	100	67.331	Ictidomys_tridecemlineatus
ENSORLG00000014676	srpra	100	67.846	ENSJJAG00000020272	Srpr	100	65.517	Jaculus_jaculus
ENSORLG00000014676	srpra	93	96.190	ENSKMAG00000002280	srpra	100	83.257	Kryptolebias_marmoratus
ENSORLG00000014676	srpra	94	96.353	ENSLBEG00000009608	srpra	100	84.639	Labrus_bergylta
ENSORLG00000014676	srpra	100	69.651	ENSLACG00000017781	SRPRA	85	88.571	Latimeria_chalumnae
ENSORLG00000014676	srpra	84	93.125	ENSLOCG00000002733	srpra	100	74.695	Lepisosteus_oculatus
ENSORLG00000014676	srpra	100	66.974	ENSLAFG00000010252	SRPRA	100	66.870	Loxodonta_africana
ENSORLG00000014676	srpra	100	68.252	ENSMFAG00000032606	SRPRA	86	86.349	Macaca_fascicularis
ENSORLG00000014676	srpra	100	68.252	ENSMMUG00000007938	SRPRA	86	86.349	Macaca_mulatta
ENSORLG00000014676	srpra	100	68.502	ENSMNEG00000030709	SRPRA	86	86.349	Macaca_nemestrina
ENSORLG00000014676	srpra	100	68.252	ENSMLEG00000043404	SRPRA	86	86.349	Mandrillus_leucophaeus
ENSORLG00000014676	srpra	95	95.137	ENSMAMG00000000473	srpra	100	84.154	Mastacembelus_armatus
ENSORLG00000014676	srpra	95	96.061	ENSMZEG00005013432	srpra	100	83.692	Maylandia_zebra
ENSORLG00000014676	srpra	86	88.535	ENSMGAG00000000732	SRPRA	100	70.000	Meleagris_gallopavo
ENSORLG00000014676	srpra	100	68.817	ENSMAUG00000015648	Srpr	100	68.510	Mesocricetus_auratus
ENSORLG00000014676	srpra	100	68.098	ENSMICG00000015981	SRPRA	86	86.032	Microcebus_murinus
ENSORLG00000014676	srpra	100	68.510	ENSMOCG00000008311	Srpr	100	68.203	Microtus_ochrogaster
ENSORLG00000014676	srpra	100	77.147	ENSMMOG00000005019	srpra	100	76.723	Mola_mola
ENSORLG00000014676	srpra	100	67.638	ENSMODG00000004576	-	86	85.714	Monodelphis_domestica
ENSORLG00000014676	srpra	94	95.385	ENSMALG00000011343	srpra	100	84.308	Monopterus_albus
ENSORLG00000014676	srpra	100	68.308	MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	Mus_caroli
ENSORLG00000014676	srpra	100	68.356	ENSMUSG00000032042	Srpr	86	89.394	Mus_musculus
ENSORLG00000014676	srpra	100	68.356	MGP_PahariEiJ_G0014816	Srpr	86	89.394	Mus_pahari
ENSORLG00000014676	srpra	93	85.455	MGP_SPRETEiJ_G0033075	Srpr	85	86.349	Mus_spretus
ENSORLG00000014676	srpra	100	68.712	ENSMPUG00000006626	SRPRA	100	67.791	Mustela_putorius_furo
ENSORLG00000014676	srpra	100	68.615	ENSMLUG00000017334	SRPRA	100	67.846	Myotis_lucifugus
ENSORLG00000014676	srpra	100	68.049	ENSNGAG00000015686	Srpr	100	67.896	Nannospalax_galili
ENSORLG00000014676	srpra	95	96.061	ENSNBRG00000017311	srpra	100	83.077	Neolamprologus_brichardi
ENSORLG00000014676	srpra	99	65.224	ENSNLEG00000007467	SRPRA	85	86.349	Nomascus_leucogenys
ENSORLG00000014676	srpra	94	67.047	ENSMEUG00000004956	SRPRA	81	85.714	Notamacropus_eugenii
ENSORLG00000014676	srpra	100	64.024	ENSOPRG00000013160	SRPRA	100	61.883	Ochotona_princeps
ENSORLG00000014676	srpra	100	68.807	ENSODEG00000004730	SRPRA	86	86.349	Octodon_degus
ENSORLG00000014676	srpra	95	95.758	ENSONIG00000005324	srpra	100	83.692	Oreochromis_niloticus
ENSORLG00000014676	srpra	100	68.558	ENSOCUG00000017057	SRPRA	100	67.841	Oryctolagus_cuniculus
ENSORLG00000014676	srpra	100	99.533	ENSORLG00020009240	srpra	100	99.533	Oryzias_latipes_hni
ENSORLG00000014676	srpra	100	98.911	ENSORLG00015015405	srpra	100	98.911	Oryzias_latipes_hsok
ENSORLG00000014676	srpra	100	95.023	ENSOMEG00000005872	srpra	100	95.023	Oryzias_melastigma
ENSORLG00000014676	srpra	100	68.654	ENSOGAG00000008926	SRPRA	86	86.032	Otolemur_garnettii
ENSORLG00000014676	srpra	100	65.291	ENSOARG00000012397	SRPRA	86	85.714	Ovis_aries
ENSORLG00000014676	srpra	100	68.405	ENSPPAG00000030813	SRPRA	85	86.349	Pan_paniscus
ENSORLG00000014676	srpra	100	68.702	ENSPPRG00000001542	SRPRA	100	67.431	Panthera_pardus
ENSORLG00000014676	srpra	100	68.550	ENSPTIG00000006989	SRPRA	100	67.278	Panthera_tigris_altaica
ENSORLG00000014676	srpra	100	68.405	ENSPTRG00000028360	SRPRA	85	86.349	Pan_troglodytes
ENSORLG00000014676	srpra	100	68.252	ENSPANG00000010858	SRPRA	86	86.349	Papio_anubis
ENSORLG00000014676	srpra	93	89.571	ENSPKIG00000016106	srpra	100	75.269	Paramormyrops_kingsleyae
ENSORLG00000014676	srpra	89	87.387	ENSPSIG00000012009	SRPRA	100	70.098	Pelodiscus_sinensis
ENSORLG00000014676	srpra	100	79.134	ENSPMGG00000001393	srpra	85	95.556	Periophthalmus_magnuspinnatus
ENSORLG00000014676	srpra	100	68.664	ENSPEMG00000018279	Srpr	100	68.356	Peromyscus_maniculatus_bairdii
ENSORLG00000014676	srpra	99	62.730	ENSPMAG00000009559	srpra	99	62.748	Petromyzon_marinus
ENSORLG00000014676	srpra	100	67.176	ENSPCIG00000010207	SRPRA	100	66.870	Phascolarctos_cinereus
ENSORLG00000014676	srpra	100	85.231	ENSPFOG00000003114	srpra	100	85.692	Poecilia_formosa
ENSORLG00000014676	srpra	100	85.077	ENSPLAG00000007323	srpra	100	85.692	Poecilia_latipinna
ENSORLG00000014676	srpra	100	85.231	ENSPMEG00000015658	srpra	100	85.692	Poecilia_mexicana
ENSORLG00000014676	srpra	100	85.077	ENSPREG00000004937	srpra	100	85.692	Poecilia_reticulata
ENSORLG00000014676	srpra	89	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSORLG00000014676	srpra	60	90.698	ENSPCAG00000003801	-	61	90.698	Procavia_capensis
ENSORLG00000014676	srpra	100	68.252	ENSPCOG00000025726	SRPRA	86	85.714	Propithecus_coquereli
ENSORLG00000014676	srpra	100	68.817	ENSPVAG00000000993	SRPRA	100	67.896	Pteropus_vampyrus
ENSORLG00000014676	srpra	95	96.061	ENSPNYG00000012371	srpra	100	83.692	Pundamilia_nyererei
ENSORLG00000014676	srpra	92	93.354	ENSPNAG00000013476	srpra	100	78.582	Pygocentrus_nattereri
ENSORLG00000014676	srpra	100	68.510	ENSRNOG00000010543	Srpra	100	68.203	Rattus_norvegicus
ENSORLG00000014676	srpra	100	68.252	ENSRBIG00000008702	SRPRA	86	86.349	Rhinopithecus_bieti
ENSORLG00000014676	srpra	100	68.147	ENSRROG00000029494	SRPRA	100	67.431	Rhinopithecus_roxellana
ENSORLG00000014676	srpra	58	42.151	YDR292C	-	52	42.553	Saccharomyces_cerevisiae
ENSORLG00000014676	srpra	100	67.791	ENSSBOG00000035892	SRPRA	86	86.032	Saimiri_boliviensis_boliviensis
ENSORLG00000014676	srpra	94	66.830	ENSSHAG00000009168	SRPRA	83	85.714	Sarcophilus_harrisii
ENSORLG00000014676	srpra	81	92.453	ENSSFOG00015008837	srpra	82	92.453	Scleropages_formosus
ENSORLG00000014676	srpra	100	75.385	ENSSMAG00000002783	srpra	100	76.050	Scophthalmus_maximus
ENSORLG00000014676	srpra	100	84.816	ENSSDUG00000013920	srpra	100	78.019	Seriola_dumerili
ENSORLG00000014676	srpra	100	84.816	ENSSLDG00000008601	srpra	93	85.123	Seriola_lalandi_dorsalis
ENSORLG00000014676	srpra	84	82.927	ENSSARG00000012434	SRPRA	86	82.927	Sorex_araneus
ENSORLG00000014676	srpra	92	86.624	ENSSPUG00000018221	SRPRA	85	86.667	Sphenodon_punctatus
ENSORLG00000014676	srpra	94	97.264	ENSSPAG00000005103	srpra	100	86.810	Stegastes_partitus
ENSORLG00000014676	srpra	100	68.558	ENSSSCG00000015227	SRPRA	86	86.032	Sus_scrofa
ENSORLG00000014676	srpra	86	86.306	ENSTGUG00000000815	SRPRA	100	67.484	Taeniopygia_guttata
ENSORLG00000014676	srpra	100	82.326	ENSTRUG00000006856	srpra	100	82.481	Takifugu_rubripes
ENSORLG00000014676	srpra	95	87.576	ENSTNIG00000010316	srpra	100	77.812	Tetraodon_nigroviridis
ENSORLG00000014676	srpra	100	68.252	ENSTTRG00000001558	SRPRA	100	66.972	Tursiops_truncatus
ENSORLG00000014676	srpra	100	68.341	ENSUAMG00000005510	SRPRA	100	67.328	Ursus_americanus
ENSORLG00000014676	srpra	96	61.852	ENSUMAG00000002269	SRPRA	100	61.852	Ursus_maritimus
ENSORLG00000014676	srpra	69	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSORLG00000014676	srpra	100	68.712	ENSVVUG00000020094	SRPRA	100	67.945	Vulpes_vulpes
ENSORLG00000014676	srpra	92	69.939	ENSXETG00000003920	srpra	100	60.942	Xenopus_tropicalis
ENSORLG00000014676	srpra	100	83.659	ENSXCOG00000001286	srpra	98	96.508	Xiphophorus_couchianus
ENSORLG00000014676	srpra	100	85.362	ENSXMAG00000028401	srpra	100	85.317	Xiphophorus_maculatus