EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000014948 (Gene tree)
Gene ID: 101159019
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 55647 bases
Position: chr8:20399582-20455228
Accession: 101159019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000018740	Fox-1_C	PF12414.8	5.6e-37	1	1
ENSORLP00000018740	RRM_1	PF00076.22	2.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000018741	-	5030	XM_004071813	ENSORLP00000018740	462 (aa)	XP_004071861	H2MJ98

Gene Model

Click here to download ENSORLG00000014948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000014948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000014948	-	100	71.338	ENSORLG00000028082	rbfox2	100	70.172
ENSORLG00000014948	-	57	63.534	ENSORLG00000011269	rbfox1l	63	61.654
ENSORLG00000014948	-	84	52.812	ENSORLG00000000905	rbfox3b	55	59.794

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000014948	-	94	57.652	ENSG00000100320	RBFOX2	99	58.333	Homo_sapiens
ENSORLG00000014948	-	100	91.631	ENSAPOG00000021561	-	100	91.631	Acanthochromis_polyacanthus
ENSORLG00000014948	-	100	73.305	ENSAPOG00000004877	rbfox2	100	72.068	Acanthochromis_polyacanthus
ENSORLG00000014948	-	62	67.593	ENSAMEG00000007228	RBFOX2	100	65.109	Ailuropoda_melanoleuca
ENSORLG00000014948	-	50	70.638	ENSACIG00000001690	rbfox2	90	66.406	Amphilophus_citrinellus
ENSORLG00000014948	-	100	73.305	ENSAOCG00000013752	rbfox2	100	72.068	Amphiprion_ocellaris
ENSORLG00000014948	-	100	93.103	ENSAOCG00000015358	-	100	92.241	Amphiprion_ocellaris
ENSORLG00000014948	-	100	93.103	ENSAPEG00000013905	-	100	92.241	Amphiprion_percula
ENSORLG00000014948	-	100	73.517	ENSAPEG00000022359	rbfox2	100	72.281	Amphiprion_percula
ENSORLG00000014948	-	100	72.187	ENSATEG00000021951	rbfox2	100	71.642	Anabas_testudineus
ENSORLG00000014948	-	100	90.558	ENSATEG00000009959	-	100	90.773	Anabas_testudineus
ENSORLG00000014948	-	72	61.662	ENSAPLG00000007609	RBFOX2	91	59.730	Anas_platyrhynchos
ENSORLG00000014948	-	91	58.065	ENSACAG00000016535	RBFOX2	96	56.332	Anolis_carolinensis
ENSORLG00000014948	-	63	67.485	ENSANAG00000015245	RBFOX2	99	65.015	Aotus_nancymaae
ENSORLG00000014948	-	100	90.558	ENSACLG00000017380	-	100	90.625	Astatotilapia_calliptera
ENSORLG00000014948	-	100	72.824	ENSACLG00000009744	rbfox2	100	71.795	Astatotilapia_calliptera
ENSORLG00000014948	-	100	71.670	ENSAMXG00000011451	rbfox2	100	69.872	Astyanax_mexicanus
ENSORLG00000014948	-	91	58.244	ENSBTAG00000020125	RBFOX2	98	56.500	Bos_taurus
ENSORLG00000014948	-	91	58.887	ENSCJAG00000019456	-	98	58.897	Callithrix_jacchus
ENSORLG00000014948	-	78	61.307	ENSCJAG00000038886	-	95	58.987	Callithrix_jacchus
ENSORLG00000014948	-	78	61.307	ENSCAFG00000001701	RBFOX2	91	60.490	Canis_familiaris
ENSORLG00000014948	-	91	51.441	ENSCAFG00020004541	RBFOX2	96	49.002	Canis_lupus_dingo
ENSORLG00000014948	-	91	58.531	ENSCHIG00000014027	RBFOX2	97	58.853	Capra_hircus
ENSORLG00000014948	-	81	61.483	ENSTSYG00000014123	RBFOX2	100	59.036	Carlito_syrichta
ENSORLG00000014948	-	69	61.538	ENSCAPG00000014308	RBFOX2	86	56.119	Cavia_aperea
ENSORLG00000014948	-	79	61.347	ENSCPOG00000022180	RBFOX2	97	59.045	Cavia_porcellus
ENSORLG00000014948	-	91	58.761	ENSCCAG00000036584	RBFOX2	96	56.989	Cebus_capucinus
ENSORLG00000014948	-	91	56.182	ENSCATG00000038655	RBFOX2	97	57.178	Cercocebus_atys
ENSORLG00000014948	-	78	59.398	ENSCLAG00000017106	RBFOX2	99	57.107	Chinchilla_lanigera
ENSORLG00000014948	-	65	59.118	ENSCSAG00000008110	RBFOX2	88	58.824	Chlorocebus_sabaeus
ENSORLG00000014948	-	65	56.471	ENSCHOG00000002887	RBFOX2	100	56.176	Choloepus_hoffmanni
ENSORLG00000014948	-	72	62.264	ENSCPBG00000023144	RBFOX2	96	60.054	Chrysemys_picta_bellii
ENSORLG00000014948	-	81	61.483	ENSCANG00000035832	RBFOX2	100	59.277	Colobus_angolensis_palliatus
ENSORLG00000014948	-	91	58.495	ENSCGRG00001017727	Rbfox2	98	56.423	Cricetulus_griseus_chok1gshd
ENSORLG00000014948	-	78	60.891	ENSCGRG00000014237	Rbfox2	98	58.603	Cricetulus_griseus_crigri
ENSORLG00000014948	-	100	86.042	ENSCSEG00000007360	-	100	87.083	Cynoglossus_semilaevis
ENSORLG00000014948	-	100	67.269	ENSCSEG00000007748	rbfox2	100	66.734	Cynoglossus_semilaevis
ENSORLG00000014948	-	78	77.027	ENSCVAG00000016503	-	98	76.344	Cyprinodon_variegatus
ENSORLG00000014948	-	52	77.200	ENSDARG00000052182	rbfox2	100	77.236	Danio_rerio
ENSORLG00000014948	-	72	62.703	ENSDNOG00000004372	RBFOX2	87	60.490	Dasypus_novemcinctus
ENSORLG00000014948	-	72	57.412	ENSDORG00000015003	Rbfox2	96	56.522	Dipodomys_ordii
ENSORLG00000014948	-	71	73.973	ENSETEG00000005638	RBFOX2	83	65.035	Echinops_telfairi
ENSORLG00000014948	-	91	58.836	ENSEASG00005018920	RBFOX2	96	56.833	Equus_asinus_asinus
ENSORLG00000014948	-	91	58.836	ENSECAG00000018923	RBFOX2	96	56.833	Equus_caballus
ENSORLG00000014948	-	78	55.087	ENSEEUG00000004549	RBFOX2	100	52.750	Erinaceus_europaeus
ENSORLG00000014948	-	52	73.770	ENSELUG00000000102	rbfox2	100	73.770	Esox_lucius
ENSORLG00000014948	-	100	75.967	ENSELUG00000009404	-	100	73.717	Esox_lucius
ENSORLG00000014948	-	91	57.692	ENSFCAG00000010061	RBFOX2	97	56.281	Felis_catus
ENSORLG00000014948	-	72	62.264	ENSFALG00000013111	RBFOX2	90	60.054	Ficedula_albicollis
ENSORLG00000014948	-	56	52.901	ENSFDAG00000006204	RBFOX2	55	66.332	Fukomys_damarensis
ENSORLG00000014948	-	100	72.979	ENSFHEG00000010546	rbfox2	100	71.642	Fundulus_heteroclitus
ENSORLG00000014948	-	79	58.040	ENSGMOG00000005278	rbfox2	99	57.252	Gadus_morhua
ENSORLG00000014948	-	54	57.597	ENSGALG00000012540	RBFOX2	72	57.597	Gallus_gallus
ENSORLG00000014948	-	53	73.984	ENSGAFG00000017428	-	95	74.390	Gambusia_affinis
ENSORLG00000014948	-	79	62.871	ENSGACG00000015968	rbfox2	98	64.032	Gasterosteus_aculeatus
ENSORLG00000014948	-	78	69.845	ENSGACG00000007174	-	98	71.392	Gasterosteus_aculeatus
ENSORLG00000014948	-	78	60.902	ENSGAGG00000025884	RBFOX2	98	58.586	Gopherus_agassizii
ENSORLG00000014948	-	91	58.280	ENSGGOG00000037332	RBFOX2	98	54.684	Gorilla_gorilla
ENSORLG00000014948	-	100	72.824	ENSHBUG00000004356	rbfox2	100	71.795	Haplochromis_burtoni
ENSORLG00000014948	-	100	90.753	ENSHBUG00000000856	-	100	90.538	Haplochromis_burtoni
ENSORLG00000014948	-	94	55.208	ENSHGLG00000012907	RBFOX2	99	59.611	Heterocephalus_glaber_female
ENSORLG00000014948	-	72	62.667	ENSHGLG00100009986	RBFOX2	91	60.484	Heterocephalus_glaber_male
ENSORLG00000014948	-	100	85.161	ENSHCOG00000005662	-	100	84.731	Hippocampus_comes
ENSORLG00000014948	-	100	68.908	ENSHCOG00000016102	rbfox2	100	68.657	Hippocampus_comes
ENSORLG00000014948	-	100	67.715	ENSIPUG00000016896	rbfox2	96	72.355	Ictalurus_punctatus
ENSORLG00000014948	-	78	58.647	ENSSTOG00000014841	RBFOX2	98	56.313	Ictidomys_tridecemlineatus
ENSORLG00000014948	-	78	59.091	ENSJJAG00000014885	Rbfox2	98	57.576	Jaculus_jaculus
ENSORLG00000014948	-	100	71.702	ENSKMAG00000021880	-	100	71.030	Kryptolebias_marmoratus
ENSORLG00000014948	-	100	89.149	ENSKMAG00000013354	-	100	90.000	Kryptolebias_marmoratus
ENSORLG00000014948	-	72	55.412	ENSLACG00000003339	RBFOX2	72	61.921	Latimeria_chalumnae
ENSORLG00000014948	-	72	61.067	ENSLAFG00000027140	RBFOX2	93	59.409	Loxodonta_africana
ENSORLG00000014948	-	91	56.182	ENSMFAG00000031994	RBFOX2	96	59.611	Macaca_fascicularis
ENSORLG00000014948	-	78	61.558	ENSMMUG00000014010	RBFOX2	96	60.870	Macaca_mulatta
ENSORLG00000014948	-	91	55.914	ENSMNEG00000034388	RBFOX2	97	56.867	Macaca_nemestrina
ENSORLG00000014948	-	81	61.483	ENSMLEG00000005854	RBFOX2	100	59.277	Mandrillus_leucophaeus
ENSORLG00000014948	-	100	83.906	ENSMAMG00000008980	-	100	84.764	Mastacembelus_armatus
ENSORLG00000014948	-	100	72.996	ENSMAMG00000004293	rbfox2	100	71.915	Mastacembelus_armatus
ENSORLG00000014948	-	100	88.412	ENSMZEG00005004959	-	100	87.983	Maylandia_zebra
ENSORLG00000014948	-	100	70.638	ENSMZEG00005023838	rbfox2	100	69.379	Maylandia_zebra
ENSORLG00000014948	-	78	59.250	ENSMAUG00000018816	Rbfox2	98	56.675	Mesocricetus_auratus
ENSORLG00000014948	-	94	57.741	ENSMICG00000035417	RBFOX2	98	58.647	Microcebus_murinus
ENSORLG00000014948	-	60	47.742	ENSMICG00000046341	-	78	47.419	Microcebus_murinus
ENSORLG00000014948	-	78	58.396	ENSMOCG00000009327	Rbfox2	98	56.061	Microtus_ochrogaster
ENSORLG00000014948	-	52	70.370	ENSMMOG00000008287	rbfox2	100	69.167	Mola_mola
ENSORLG00000014948	-	72	59.740	ENSMODG00000001122	RBFOX2	93	57.853	Monodelphis_domestica
ENSORLG00000014948	-	52	81.301	ENSMALG00000000623	rbfox2	100	80.165	Monopterus_albus
ENSORLG00000014948	-	91	57.328	MGP_CAROLIEiJ_G0019957	Rbfox2	98	58.333	Mus_caroli
ENSORLG00000014948	-	91	57.051	ENSMUSG00000033565	Rbfox2	98	58.333	Mus_musculus
ENSORLG00000014948	-	91	57.112	MGP_PahariEiJ_G0019967	Rbfox2	98	58.333	Mus_pahari
ENSORLG00000014948	-	91	57.328	MGP_SPRETEiJ_G0020860	Rbfox2	98	58.333	Mus_spretus
ENSORLG00000014948	-	81	61.244	ENSMPUG00000012555	RBFOX2	97	59.036	Mustela_putorius_furo
ENSORLG00000014948	-	81	59.091	ENSMLUG00000002676	RBFOX2	98	58.373	Myotis_lucifugus
ENSORLG00000014948	-	62	64.596	ENSNGAG00000020528	Rbfox2	98	55.808	Nannospalax_galili
ENSORLG00000014948	-	100	72.458	ENSNBRG00000018155	rbfox2	100	71.215	Neolamprologus_brichardi
ENSORLG00000014948	-	84	89.770	ENSNBRG00000001568	-	90	89.514	Neolamprologus_brichardi
ENSORLG00000014948	-	85	60.412	ENSNLEG00000034979	RBFOX2	100	58.295	Nomascus_leucogenys
ENSORLG00000014948	-	81	57.757	ENSMEUG00000001547	RBFOX2	100	55.769	Notamacropus_eugenii
ENSORLG00000014948	-	82	77.320	ENSOPRG00000014878	RBFOX2	81	64.894	Ochotona_princeps
ENSORLG00000014948	-	91	59.013	ENSODEG00000009937	RBFOX2	98	57.323	Octodon_degus
ENSORLG00000014948	-	79	65.366	ENSONIG00000017998	rbfox2	97	64.286	Oreochromis_niloticus
ENSORLG00000014948	-	78	78.030	ENSONIG00000008341	-	99	77.696	Oreochromis_niloticus
ENSORLG00000014948	-	56	60.410	ENSOANG00000007489	RBFOX2	89	60.410	Ornithorhynchus_anatinus
ENSORLG00000014948	-	81	53.699	ENSOCUG00000001349	RBFOX2	97	51.691	Oryctolagus_cuniculus
ENSORLG00000014948	-	100	71.550	ENSORLG00020008976	rbfox2	100	70.386	Oryzias_latipes_hni
ENSORLG00000014948	-	100	99.351	ENSORLG00020005676	-	100	99.351	Oryzias_latipes_hni
ENSORLG00000014948	-	100	99.351	ENSORLG00015000797	-	100	99.351	Oryzias_latipes_hsok
ENSORLG00000014948	-	100	71.550	ENSORLG00015007027	rbfox2	100	70.386	Oryzias_latipes_hsok
ENSORLG00000014948	-	100	98.060	ENSOMEG00000007909	-	100	98.060	Oryzias_melastigma
ENSORLG00000014948	-	100	71.975	ENSOMEG00000015966	rbfox2	100	70.726	Oryzias_melastigma
ENSORLG00000014948	-	78	60.945	ENSOGAG00000033250	RBFOX2	99	58.647	Otolemur_garnettii
ENSORLG00000014948	-	72	61.828	ENSOARG00000018669	RBFOX2	91	58.378	Ovis_aries
ENSORLG00000014948	-	82	61.283	ENSPPAG00000035653	RBFOX2	98	59.091	Pan_paniscus
ENSORLG00000014948	-	91	57.906	ENSPPRG00000015635	RBFOX2	96	60.326	Panthera_pardus
ENSORLG00000014948	-	78	60.794	ENSPTIG00000019147	RBFOX2	92	59.946	Panthera_tigris_altaica
ENSORLG00000014948	-	91	58.280	ENSPTRG00000014305	RBFOX2	98	54.684	Pan_troglodytes
ENSORLG00000014948	-	91	58.065	ENSPANG00000007030	RBFOX2	98	56.250	Papio_anubis
ENSORLG00000014948	-	57	65.411	ENSPKIG00000010816	-	73	65.172	Paramormyrops_kingsleyae
ENSORLG00000014948	-	100	66.311	ENSPKIG00000006854	-	100	65.451	Paramormyrops_kingsleyae
ENSORLG00000014948	-	78	60.902	ENSPSIG00000017828	RBFOX2	98	58.586	Pelodiscus_sinensis
ENSORLG00000014948	-	52	77.959	ENSPMGG00000007138	rbfox2	100	77.083	Periophthalmus_magnuspinnatus
ENSORLG00000014948	-	62	85.069	ENSPMGG00000016969	-	87	85.911	Periophthalmus_magnuspinnatus
ENSORLG00000014948	-	78	58.396	ENSPEMG00000012542	Rbfox2	98	56.061	Peromyscus_maniculatus_bairdii
ENSORLG00000014948	-	82	60.382	ENSPCIG00000021550	RBFOX2	98	58.291	Phascolarctos_cinereus
ENSORLG00000014948	-	100	71.975	ENSPFOG00000014209	rbfox2	100	70.664	Poecilia_formosa
ENSORLG00000014948	-	69	89.164	ENSPFOG00000001869	-	100	89.474	Poecilia_formosa
ENSORLG00000014948	-	52	78.601	ENSPLAG00000017308	rbfox2	100	77.273	Poecilia_latipinna
ENSORLG00000014948	-	52	96.266	ENSPLAG00000002710	-	100	96.266	Poecilia_latipinna
ENSORLG00000014948	-	52	80.081	ENSPMEG00000007320	rbfox2	100	78.926	Poecilia_mexicana
ENSORLG00000014948	-	52	96.680	ENSPMEG00000013663	-	100	96.680	Poecilia_mexicana
ENSORLG00000014948	-	52	78.049	ENSPREG00000012955	rbfox2	100	77.178	Poecilia_reticulata
ENSORLG00000014948	-	91	58.280	ENSPPYG00000011766	RBFOX2	96	56.652	Pongo_abelii
ENSORLG00000014948	-	72	58.760	ENSPCOG00000016273	RBFOX2	92	56.403	Propithecus_coquereli
ENSORLG00000014948	-	51	67.273	ENSPVAG00000015844	RBFOX2	66	62.868	Pteropus_vampyrus
ENSORLG00000014948	-	100	72.458	ENSPNYG00000016161	rbfox2	100	71.429	Pundamilia_nyererei
ENSORLG00000014948	-	100	91.183	ENSPNYG00000020595	-	100	90.753	Pundamilia_nyererei
ENSORLG00000014948	-	100	65.539	ENSPNAG00000000168	rbfox2	100	64.316	Pygocentrus_nattereri
ENSORLG00000014948	-	99	58.017	ENSPNAG00000014196	-	100	56.290	Pygocentrus_nattereri
ENSORLG00000014948	-	81	57.971	ENSRNOG00000004688	Rbfox2	97	55.961	Rattus_norvegicus
ENSORLG00000014948	-	78	61.558	ENSRBIG00000033696	RBFOX2	98	56.818	Rhinopithecus_bieti
ENSORLG00000014948	-	91	58.280	ENSRROG00000035715	RBFOX2	97	58.955	Rhinopithecus_roxellana
ENSORLG00000014948	-	81	61.743	ENSSBOG00000028291	RBFOX2	99	59.367	Saimiri_boliviensis_boliviensis
ENSORLG00000014948	-	81	60.577	ENSSHAG00000006835	RBFOX2	97	58.354	Sarcophilus_harrisii
ENSORLG00000014948	-	100	65.618	ENSSFOG00015010482	-	99	71.088	Scleropages_formosus
ENSORLG00000014948	-	51	77.542	ENSSFOG00015013291	-	76	77.253	Scleropages_formosus
ENSORLG00000014948	-	100	72.187	ENSSMAG00000013662	rbfox2	100	71.368	Scophthalmus_maximus
ENSORLG00000014948	-	100	85.897	ENSSMAG00000004317	-	100	85.043	Scophthalmus_maximus
ENSORLG00000014948	-	100	89.914	ENSSDUG00000009511	-	100	90.558	Seriola_dumerili
ENSORLG00000014948	-	100	73.885	ENSSDUG00000004292	rbfox2	100	72.650	Seriola_dumerili
ENSORLG00000014948	-	85	73.935	ENSSLDG00000023983	rbfox2	83	74.046	Seriola_lalandi_dorsalis
ENSORLG00000014948	-	100	90.558	ENSSLDG00000018052	-	100	90.343	Seriola_lalandi_dorsalis
ENSORLG00000014948	-	53	58.423	ENSSPUG00000011797	RBFOX2	74	58.423	Sphenodon_punctatus
ENSORLG00000014948	-	100	90.987	ENSSPAG00000016272	-	100	91.202	Stegastes_partitus
ENSORLG00000014948	-	100	73.517	ENSSPAG00000013681	rbfox2	100	72.281	Stegastes_partitus
ENSORLG00000014948	-	81	61.836	ENSSSCG00000000152	RBFOX2	98	59.241	Sus_scrofa
ENSORLG00000014948	-	72	62.264	ENSTGUG00000010808	RBFOX2	93	60.054	Taeniopygia_guttata
ENSORLG00000014948	-	79	67.442	ENSTRUG00000007739	-	97	62.953	Takifugu_rubripes
ENSORLG00000014948	-	55	81.034	ENSTBEG00000003297	-	62	81.034	Tupaia_belangeri
ENSORLG00000014948	-	81	61.244	ENSTTRG00000006922	RBFOX2	100	59.036	Tursiops_truncatus
ENSORLG00000014948	-	76	59.694	ENSUAMG00000010612	RBFOX2	88	58.726	Ursus_americanus
ENSORLG00000014948	-	62	58.879	ENSUMAG00000016785	RBFOX2	77	58.567	Ursus_maritimus
ENSORLG00000014948	-	81	56.220	ENSVPAG00000002824	RBFOX2	100	54.940	Vicugna_pacos
ENSORLG00000014948	-	83	60.187	ENSVVUG00000023561	RBFOX2	100	58.019	Vulpes_vulpes
ENSORLG00000014948	-	68	61.648	ENSXETG00000000231	rbfox2	85	59.483	Xenopus_tropicalis
ENSORLG00000014948	-	58	97.674	ENSXCOG00000015905	-	84	97.674	Xiphophorus_couchianus
ENSORLG00000014948	-	100	87.931	ENSXMAG00000026769	-	100	88.362	Xiphophorus_maculatus
ENSORLG00000014948	-	78	71.622	ENSXMAG00000029498	rbfox2	90	71.858	Xiphophorus_maculatus