EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000015195 (Gene tree)
Gene ID: 101157055
Gene Symbol: pan2
Alias: -
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 14509 bases
Position: chr7:22087123-22101631
Accession: 101157055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000026480	RNase_T	PF00929.24	5.7e-20	1	1
ENSORLP00000019039	RNase_T	PF00929.24	6.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000019040	-	3630	-	ENSORLP00000019039	1209 (aa)	-	H2MK35
ENSORLT00000031127	-	5271	XM_004070974	ENSORLP00000026480	1206 (aa)	XP_004071022	UPI0002A4C65B

Gene Model

Click here to download ENSORLG00000015195's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000015195's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000015195	pan2	100	92.289	ENSAPOG00000022955	pan2	99	92.371	Acanthochromis_polyacanthus
ENSORLG00000015195	pan2	100	75.062	ENSAMEG00000003824	PAN2	100	75.062	Ailuropoda_melanoleuca
ENSORLG00000015195	pan2	99	71.141	ENSACIG00000012858	PAN2	99	70.711	Amphilophus_citrinellus
ENSORLG00000015195	pan2	99	89.223	ENSACIG00000013079	pan2	99	89.307	Amphilophus_citrinellus
ENSORLG00000015195	pan2	100	92.537	ENSAOCG00000022334	pan2	99	92.537	Amphiprion_ocellaris
ENSORLG00000015195	pan2	100	92.149	ENSAPEG00000022760	pan2	99	92.149	Amphiprion_percula
ENSORLG00000015195	pan2	99	92.899	ENSATEG00000024030	pan2	100	92.982	Anabas_testudineus
ENSORLG00000015195	pan2	94	76.896	ENSAPLG00000005195	PAN2	100	76.896	Anas_platyrhynchos
ENSORLG00000015195	pan2	100	76.218	ENSACAG00000007067	PAN2	100	76.218	Anolis_carolinensis
ENSORLG00000015195	pan2	100	74.733	ENSANAG00000036468	PAN2	99	80.053	Aotus_nancymaae
ENSORLG00000015195	pan2	100	92.231	ENSACLG00000023674	pan2	99	92.648	Astatotilapia_calliptera
ENSORLG00000015195	pan2	98	69.451	ENSACLG00000023821	pan2	99	69.172	Astatotilapia_calliptera
ENSORLG00000015195	pan2	99	85.167	ENSAMXG00000005418	pan2	98	85.083	Astyanax_mexicanus
ENSORLG00000015195	pan2	100	74.979	ENSBTAG00000004376	PAN2	100	74.979	Bos_taurus
ENSORLG00000015195	pan2	100	74.486	ENSCJAG00000011141	PAN2	100	74.486	Callithrix_jacchus
ENSORLG00000015195	pan2	100	74.897	ENSCAFG00000000119	PAN2	100	78.462	Canis_familiaris
ENSORLG00000015195	pan2	100	74.092	ENSCAFG00020024865	PAN2	100	73.845	Canis_lupus_dingo
ENSORLG00000015195	pan2	100	74.244	ENSCHIG00000026935	PAN2	100	73.835	Capra_hircus
ENSORLG00000015195	pan2	100	73.938	ENSTSYG00000006927	PAN2	100	77.411	Carlito_syrichta
ENSORLG00000015195	pan2	100	74.550	ENSCPOG00000014918	PAN2	100	74.386	Cavia_porcellus
ENSORLG00000015195	pan2	100	74.650	ENSCCAG00000036637	PAN2	99	79.787	Cebus_capucinus
ENSORLG00000015195	pan2	100	74.568	ENSCATG00000045076	PAN2	99	80.481	Cercocebus_atys
ENSORLG00000015195	pan2	100	74.550	ENSCLAG00000011700	PAN2	100	74.386	Chinchilla_lanigera
ENSORLG00000015195	pan2	100	74.321	ENSCSAG00000005173	PAN2	100	74.321	Chlorocebus_sabaeus
ENSORLG00000015195	pan2	100	76.568	ENSCPBG00000014029	PAN2	100	76.403	Chrysemys_picta_bellii
ENSORLG00000015195	pan2	76	61.516	ENSCSAVG00000003833	-	98	61.516	Ciona_savignyi
ENSORLG00000015195	pan2	100	73.191	ENSCANG00000017798	PAN2	100	72.944	Colobus_angolensis_palliatus
ENSORLG00000015195	pan2	100	75.082	ENSCGRG00001019707	Pan2	100	75.082	Cricetulus_griseus_chok1gshd
ENSORLG00000015195	pan2	100	74.367	ENSCGRG00000009996	Pan2	100	73.959	Cricetulus_griseus_crigri
ENSORLG00000015195	pan2	100	86.650	ENSCSEG00000021529	pan2	99	86.733	Cynoglossus_semilaevis
ENSORLG00000015195	pan2	100	91.957	ENSCVAG00000010197	pan2	99	91.973	Cyprinodon_variegatus
ENSORLG00000015195	pan2	100	85.418	ENSDARG00000074675	pan2	99	85.501	Danio_rerio
ENSORLG00000015195	pan2	100	74.856	ENSDNOG00000010940	PAN2	100	74.856	Dasypus_novemcinctus
ENSORLG00000015195	pan2	97	41.363	FBgn0033352	PAN2	98	40.590	Drosophila_melanogaster
ENSORLG00000015195	pan2	74	84.682	ENSETEG00000012041	PAN2	82	83.807	Echinops_telfairi
ENSORLG00000015195	pan2	98	56.725	ENSEBUG00000002773	pan2	99	64.849	Eptatretus_burgeri
ENSORLG00000015195	pan2	100	74.571	ENSEASG00005005235	PAN2	99	76.058	Equus_asinus_asinus
ENSORLG00000015195	pan2	100	75.062	ENSECAG00000019814	PAN2	100	75.062	Equus_caballus
ENSORLG00000015195	pan2	99	87.417	ENSELUG00000024604	pan2	99	87.417	Esox_lucius
ENSORLG00000015195	pan2	100	74.979	ENSFCAG00000012021	PAN2	100	74.979	Felis_catus
ENSORLG00000015195	pan2	99	76.923	ENSFALG00000000464	PAN2	98	76.756	Ficedula_albicollis
ENSORLG00000015195	pan2	100	74.592	ENSFDAG00000017104	PAN2	100	74.183	Fukomys_damarensis
ENSORLG00000015195	pan2	90	90.132	ENSFHEG00000000157	pan2	96	90.132	Fundulus_heteroclitus
ENSORLG00000015195	pan2	100	85.326	ENSGMOG00000007249	pan2	99	85.408	Gadus_morhua
ENSORLG00000015195	pan2	100	76.815	ENSGALG00000031512	PAN2	100	76.815	Gallus_gallus
ENSORLG00000015195	pan2	100	91.874	ENSGAFG00000000284	pan2	99	91.874	Gambusia_affinis
ENSORLG00000015195	pan2	100	89.703	ENSGACG00000010722	pan2	99	90.033	Gasterosteus_aculeatus
ENSORLG00000015195	pan2	100	75.970	ENSGAGG00000007868	PAN2	100	75.805	Gopherus_agassizii
ENSORLG00000015195	pan2	100	74.486	ENSGGOG00000009115	PAN2	99	80.481	Gorilla_gorilla
ENSORLG00000015195	pan2	100	92.537	ENSHBUG00000005234	pan2	99	92.786	Haplochromis_burtoni
ENSORLG00000015195	pan2	99	74.503	ENSHGLG00000005647	PAN2	98	74.145	Heterocephalus_glaber_female
ENSORLG00000015195	pan2	99	74.255	ENSHGLG00100014057	PAN2	98	73.561	Heterocephalus_glaber_male
ENSORLG00000015195	pan2	100	88.347	ENSHCOG00000007920	pan2	99	88.347	Hippocampus_comes
ENSORLG00000015195	pan2	100	85.124	ENSIPUG00000011065	PAN2	99	85.207	Ictalurus_punctatus
ENSORLG00000015195	pan2	94	74.771	ENSSTOG00000015974	PAN2	100	74.771	Ictidomys_tridecemlineatus
ENSORLG00000015195	pan2	100	74.321	ENSJJAG00000013044	Pan2	98	74.321	Jaculus_jaculus
ENSORLG00000015195	pan2	100	92.206	ENSKMAG00000006192	pan2	99	92.289	Kryptolebias_marmoratus
ENSORLG00000015195	pan2	97	86.383	ENSLBEG00000015763	pan2	99	86.383	Labrus_bergylta
ENSORLG00000015195	pan2	100	70.024	ENSLACG00000018694	PAN2	100	69.373	Latimeria_chalumnae
ENSORLG00000015195	pan2	100	84.527	ENSLOCG00000004333	pan2	99	84.609	Lepisosteus_oculatus
ENSORLG00000015195	pan2	100	72.645	ENSLAFG00000014873	PAN2	100	72.482	Loxodonta_africana
ENSORLG00000015195	pan2	100	74.403	ENSMFAG00000002293	PAN2	99	80.481	Macaca_fascicularis
ENSORLG00000015195	pan2	100	74.403	ENSMMUG00000013482	PAN2	100	77.273	Macaca_mulatta
ENSORLG00000015195	pan2	100	74.486	ENSMNEG00000033264	PAN2	99	80.214	Macaca_nemestrina
ENSORLG00000015195	pan2	100	74.568	ENSMLEG00000037388	PAN2	99	80.481	Mandrillus_leucophaeus
ENSORLG00000015195	pan2	100	92.869	ENSMAMG00000001624	pan2	100	92.869	Mastacembelus_armatus
ENSORLG00000015195	pan2	98	70.608	ENSMZEG00005026472	pan2	99	70.524	Maylandia_zebra
ENSORLG00000015195	pan2	100	92.231	ENSMZEG00005026462	pan2	99	92.479	Maylandia_zebra
ENSORLG00000015195	pan2	97	77.226	ENSMGAG00000001439	PAN2	99	77.331	Meleagris_gallopavo
ENSORLG00000015195	pan2	99	75.000	ENSMAUG00000012602	Pan2	99	75.021	Mesocricetus_auratus
ENSORLG00000015195	pan2	100	74.568	ENSMICG00000017661	PAN2	100	76.410	Microcebus_murinus
ENSORLG00000015195	pan2	100	74.753	ENSMOCG00000007191	Pan2	100	74.753	Microtus_ochrogaster
ENSORLG00000015195	pan2	99	90.560	ENSMMOG00000009313	pan2	97	90.810	Mola_mola
ENSORLG00000015195	pan2	100	91.653	ENSMALG00000013377	pan2	100	91.653	Monopterus_albus
ENSORLG00000015195	pan2	100	73.895	MGP_CAROLIEiJ_G0015930	Pan2	100	73.732	Mus_caroli
ENSORLG00000015195	pan2	100	74.526	ENSMUSG00000005682	Pan2	100	74.403	Mus_musculus
ENSORLG00000015195	pan2	100	74.059	MGP_PahariEiJ_G0031154	Pan2	100	73.895	Mus_pahari
ENSORLG00000015195	pan2	100	74.691	MGP_SPRETEiJ_G0016755	Pan2	100	74.733	Mus_spretus
ENSORLG00000015195	pan2	100	75.144	ENSMPUG00000001383	PAN2	100	75.144	Mustela_putorius_furo
ENSORLG00000015195	pan2	100	74.733	ENSMLUG00000006737	PAN2	100	74.733	Myotis_lucifugus
ENSORLG00000015195	pan2	100	74.918	ENSNGAG00000007930	Pan2	100	74.918	Nannospalax_galili
ENSORLG00000015195	pan2	92	96.279	ENSNBRG00000006585	pan2	99	96.279	Neolamprologus_brichardi
ENSORLG00000015195	pan2	100	70.255	ENSNLEG00000017499	PAN2	99	79.947	Nomascus_leucogenys
ENSORLG00000015195	pan2	100	75.947	ENSMEUG00000010125	PAN2	100	75.947	Notamacropus_eugenii
ENSORLG00000015195	pan2	100	74.384	ENSOPRG00000001468	PAN2	100	74.384	Ochotona_princeps
ENSORLG00000015195	pan2	100	74.204	ENSODEG00000007203	PAN2	100	73.796	Octodon_degus
ENSORLG00000015195	pan2	100	90.131	ENSONIG00000016732	pan2	100	89.804	Oreochromis_niloticus
ENSORLG00000015195	pan2	81	67.996	ENSOANG00000005151	PAN2	99	67.298	Ornithorhynchus_anatinus
ENSORLG00000015195	pan2	100	74.162	ENSOCUG00000007227	PAN2	100	73.998	Oryctolagus_cuniculus
ENSORLG00000015195	pan2	100	99.751	ENSORLG00020000277	pan2	100	99.751	Oryzias_latipes_hni
ENSORLG00000015195	pan2	100	99.585	ENSORLG00015005193	pan2	100	99.585	Oryzias_latipes_hsok
ENSORLG00000015195	pan2	100	98.342	ENSOMEG00000022087	pan2	100	98.342	Oryzias_melastigma
ENSORLG00000015195	pan2	100	73.714	ENSOGAG00000030620	PAN2	100	73.551	Otolemur_garnettii
ENSORLG00000015195	pan2	100	74.815	ENSOARG00000009379	PAN2	100	74.815	Ovis_aries
ENSORLG00000015195	pan2	100	74.486	ENSPPAG00000001208	PAN2	99	80.481	Pan_paniscus
ENSORLG00000015195	pan2	100	74.897	ENSPPRG00000021586	PAN2	100	74.897	Panthera_pardus
ENSORLG00000015195	pan2	100	71.335	ENSPTIG00000012494	PAN2	100	71.335	Panthera_tigris_altaica
ENSORLG00000015195	pan2	100	74.486	ENSPTRG00000052054	PAN2	99	80.481	Pan_troglodytes
ENSORLG00000015195	pan2	92	76.007	ENSPANG00000018906	PAN2	99	80.481	Papio_anubis
ENSORLG00000015195	pan2	100	84.628	ENSPKIG00000003973	pan2	99	84.628	Paramormyrops_kingsleyae
ENSORLG00000015195	pan2	100	73.394	ENSPSIG00000003267	PAN2	100	73.394	Pelodiscus_sinensis
ENSORLG00000015195	pan2	100	88.152	ENSPMGG00000023186	pan2	99	89.371	Periophthalmus_magnuspinnatus
ENSORLG00000015195	pan2	100	73.959	ENSPEMG00000018505	Pan2	100	73.959	Peromyscus_maniculatus_bairdii
ENSORLG00000015195	pan2	91	67.179	ENSPMAG00000004731	pan2	100	66.938	Petromyzon_marinus
ENSORLG00000015195	pan2	100	76.485	ENSPCIG00000024643	PAN2	100	76.320	Phascolarctos_cinereus
ENSORLG00000015195	pan2	100	92.123	ENSPFOG00000008392	pan2	99	92.123	Poecilia_formosa
ENSORLG00000015195	pan2	100	92.123	ENSPLAG00000009198	pan2	99	92.123	Poecilia_latipinna
ENSORLG00000015195	pan2	100	92.040	ENSPMEG00000001484	pan2	99	92.040	Poecilia_mexicana
ENSORLG00000015195	pan2	100	92.289	ENSPREG00000000900	pan2	99	92.308	Poecilia_reticulata
ENSORLG00000015195	pan2	88	76.794	ENSPPYG00000004656	PAN2	99	77.245	Pongo_abelii
ENSORLG00000015195	pan2	92	76.212	ENSPCAG00000011047	PAN2	99	76.212	Procavia_capensis
ENSORLG00000015195	pan2	100	74.650	ENSPCOG00000018263	PAN2	100	74.650	Propithecus_coquereli
ENSORLG00000015195	pan2	94	72.810	ENSPVAG00000007591	PAN2	94	72.921	Pteropus_vampyrus
ENSORLG00000015195	pan2	99	92.481	ENSPNYG00000002629	pan2	99	92.732	Pundamilia_nyererei
ENSORLG00000015195	pan2	100	86.446	ENSPNAG00000027140	pan2	99	86.529	Pygocentrus_nattereri
ENSORLG00000015195	pan2	100	74.773	ENSRNOG00000032441	Pan2	100	74.650	Rattus_norvegicus
ENSORLG00000015195	pan2	100	74.403	ENSRBIG00000029591	PAN2	99	79.947	Rhinopithecus_bieti
ENSORLG00000015195	pan2	100	74.321	ENSRROG00000041950	PAN2	99	79.947	Rhinopithecus_roxellana
ENSORLG00000015195	pan2	81	36.616	YGL094C	-	97	36.275	Saccharomyces_cerevisiae
ENSORLG00000015195	pan2	100	74.568	ENSSBOG00000027343	PAN2	99	79.787	Saimiri_boliviensis_boliviensis
ENSORLG00000015195	pan2	92	76.356	ENSSHAG00000000122	PAN2	99	77.926	Sarcophilus_harrisii
ENSORLG00000015195	pan2	100	85.455	ENSSFOG00015017740	pan2	99	85.455	Scleropages_formosus
ENSORLG00000015195	pan2	100	90.504	ENSSMAG00000020901	pan2	99	90.504	Scophthalmus_maximus
ENSORLG00000015195	pan2	100	92.975	ENSSDUG00000001840	pan2	99	93.058	Seriola_dumerili
ENSORLG00000015195	pan2	100	93.118	ENSSLDG00000013866	pan2	99	93.201	Seriola_lalandi_dorsalis
ENSORLG00000015195	pan2	92	75.444	ENSSARG00000013350	PAN2	92	75.444	Sorex_araneus
ENSORLG00000015195	pan2	92	78.117	ENSSPUG00000004270	PAN2	99	77.937	Sphenodon_punctatus
ENSORLG00000015195	pan2	100	92.066	ENSSPAG00000019970	pan2	99	92.149	Stegastes_partitus
ENSORLG00000015195	pan2	100	74.650	ENSSSCG00000000393	PAN2	100	74.650	Sus_scrofa
ENSORLG00000015195	pan2	100	90.579	ENSTRUG00000014260	pan2	99	90.579	Takifugu_rubripes
ENSORLG00000015195	pan2	100	90.413	ENSTNIG00000012537	pan2	99	90.496	Tetraodon_nigroviridis
ENSORLG00000015195	pan2	80	74.206	ENSTTRG00000007150	PAN2	80	74.206	Tursiops_truncatus
ENSORLG00000015195	pan2	100	74.918	ENSUAMG00000026522	PAN2	100	74.671	Ursus_americanus
ENSORLG00000015195	pan2	100	74.428	ENSUMAG00000017020	PAN2	100	74.428	Ursus_maritimus
ENSORLG00000015195	pan2	79	91.133	ENSVPAG00000007309	PAN2	85	91.133	Vicugna_pacos
ENSORLG00000015195	pan2	100	74.979	ENSVVUG00000021878	PAN2	100	74.979	Vulpes_vulpes
ENSORLG00000015195	pan2	99	73.217	ENSXETG00000009434	pan2	100	74.348	Xenopus_tropicalis
ENSORLG00000015195	pan2	100	86.578	ENSXCOG00000014391	pan2	100	86.578	Xiphophorus_couchianus
ENSORLG00000015195	pan2	100	92.040	ENSXMAG00000011661	pan2	99	92.040	Xiphophorus_maculatus