EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000015307 (Gene tree)
Gene ID: 101160399
Gene Symbol: rab11ba
Alias: -
Full Name: ras-related protein Rab-11B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4031 bases
Position: chr4:26924844-26928874
Accession: 101160399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000019170	MMR_HSR1	PF01926.23	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000019171	-	657	XM_004068202	ENSORLP00000019170	218 (aa)	XP_004068250	H2MKF6

Gene Model

Click here to download ENSORLG00000015307's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000015307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000015307	rab11ba	70	33.987	ENSORLG00000025519	rras	84	35.152
ENSORLG00000015307	rab11ba	68	41.935	ENSORLG00000002071	-	64	41.935
ENSORLG00000015307	rab11ba	96	38.278	ENSORLG00000001098	si:dkey-16l2.16	97	38.278
ENSORLG00000015307	rab11ba	99	61.290	ENSORLG00000012158	rab25a	99	61.290
ENSORLG00000015307	rab11ba	68	36.000	ENSORLG00000018912	hrasb	85	37.037
ENSORLG00000015307	rab11ba	99	83.333	ENSORLG00000016126	rab11al	99	83.333
ENSORLG00000015307	rab11ba	72	37.580	ENSORLG00000027669	RAB41	74	37.580
ENSORLG00000015307	rab11ba	75	45.122	ENSORLG00000004624	rab18a	79	45.679
ENSORLG00000015307	rab11ba	72	39.877	ENSORLG00000001351	-	78	39.877
ENSORLG00000015307	rab11ba	73	31.875	ENSORLG00000003681	rheb	86	31.875
ENSORLG00000015307	rab11ba	72	36.306	ENSORLG00000016290	rab6bb	80	35.669
ENSORLG00000015307	rab11ba	80	52.299	ENSORLG00000007406	rab14	81	52.299
ENSORLG00000015307	rab11ba	78	38.728	ENSORLG00000030642	zgc:101559	74	38.728
ENSORLG00000015307	rab11ba	74	41.358	ENSORLG00000024116	RAB15	78	41.358
ENSORLG00000015307	rab11ba	72	32.278	ENSORLG00000018119	si:ch73-116o1.2	81	34.118
ENSORLG00000015307	rab11ba	77	52.976	ENSORLG00000021846	-	83	52.976
ENSORLG00000015307	rab11ba	72	34.591	ENSORLG00000009874	rabl2	68	34.591
ENSORLG00000015307	rab11ba	81	71.186	ENSORLG00000016135	rab25b	86	72.024
ENSORLG00000015307	rab11ba	74	44.444	ENSORLG00000010846	rab15	76	44.444
ENSORLG00000015307	rab11ba	94	42.157	ENSORLG00000012261	rab5aa	89	42.157
ENSORLG00000015307	rab11ba	99	87.558	ENSORLG00000018331	RAB11A	99	87.558
ENSORLG00000015307	rab11ba	74	47.205	ENSORLG00000003882	rab5c	74	47.205
ENSORLG00000015307	rab11ba	83	37.838	ENSORLG00000006628	-	86	37.838
ENSORLG00000015307	rab11ba	78	34.239	ENSORLG00000004394	rab34a	77	32.877
ENSORLG00000015307	rab11ba	84	42.473	ENSORLG00000022335	rab42a	85	42.473
ENSORLG00000015307	rab11ba	79	38.372	ENSORLG00000016555	rab3db	81	38.690
ENSORLG00000015307	rab11ba	70	35.484	ENSORLG00000024102	kras	87	36.527
ENSORLG00000015307	rab11ba	99	94.470	ENSORLG00000013938	rab11bb	99	94.470
ENSORLG00000015307	rab11ba	78	30.460	ENSORLG00000001134	dnajc27	64	30.460
ENSORLG00000015307	rab11ba	77	33.908	ENSORLG00000027892	RAB29	84	33.908
ENSORLG00000015307	rab11ba	76	40.000	ENSORLG00000017806	rab9a	87	40.000
ENSORLG00000015307	rab11ba	78	55.556	ENSORLG00000013432	rab2a	81	55.556
ENSORLG00000015307	rab11ba	96	31.818	ENSORLG00000014099	si:dkey-34d22.5	98	31.818
ENSORLG00000015307	rab11ba	73	45.342	ENSORLG00000024558	-	66	45.806
ENSORLG00000015307	rab11ba	81	43.750	ENSORLG00000029812	rab30	87	43.750
ENSORLG00000015307	rab11ba	72	32.716	ENSORLG00000025098	si:dkey-13a21.4	80	32.716
ENSORLG00000015307	rab11ba	100	95.872	ENSORLG00000015284	-	72	95.872
ENSORLG00000015307	rab11ba	77	47.929	ENSORLG00000008345	-	79	47.929
ENSORLG00000015307	rab11ba	75	45.122	ENSORLG00000009609	rab18b	80	45.122
ENSORLG00000015307	rab11ba	72	34.756	ENSORLG00000000937	-	76	34.756
ENSORLG00000015307	rab11ba	77	51.497	ENSORLG00000029921	-	78	51.497
ENSORLG00000015307	rab11ba	77	52.976	ENSORLG00000028104	rab1ab	83	52.976
ENSORLG00000015307	rab11ba	72	37.580	ENSORLG00000026197	rab6a	75	37.580
ENSORLG00000015307	rab11ba	89	43.523	ENSORLG00000025395	-	92	43.523
ENSORLG00000015307	rab11ba	83	41.209	ENSORLG00000003902	rab12	84	37.500
ENSORLG00000015307	rab11ba	76	50.000	ENSORLG00000028885	rab35b	99	44.019
ENSORLG00000015307	rab11ba	66	37.063	ENSORLG00000010115	rab23	79	36.196
ENSORLG00000015307	rab11ba	77	47.337	ENSORLG00000001850	RAB39B	79	47.337
ENSORLG00000015307	rab11ba	68	37.333	ENSORLG00000024443	zgc:55558	86	38.272
ENSORLG00000015307	rab11ba	78	36.957	ENSORLG00000030109	rab33ba	77	36.957
ENSORLG00000015307	rab11ba	74	38.922	ENSORLG00000030566	rab33a	64	37.989
ENSORLG00000015307	rab11ba	72	39.877	ENSORLG00000029090	-	79	39.877
ENSORLG00000015307	rab11ba	85	39.474	ENSORLG00000006405	rab9b	90	39.474
ENSORLG00000015307	rab11ba	96	45.024	ENSORLG00000000602	zgc:171927	99	45.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000015307	rab11ba	99	95.853	ENSG00000185236	RAB11B	100	97.826	Homo_sapiens
ENSORLG00000015307	rab11ba	100	94.570	ENSAMEG00000004955	RAB11B	100	94.570	Ailuropoda_melanoleuca
ENSORLG00000015307	rab11ba	78	97.647	ENSACIG00000024374	rab11ba	70	97.647	Amphilophus_citrinellus
ENSORLG00000015307	rab11ba	99	96.774	ENSAOCG00000018050	rab11ba	99	96.774	Amphiprion_ocellaris
ENSORLG00000015307	rab11ba	99	96.313	ENSAPEG00000009177	rab11ba	99	96.313	Amphiprion_percula
ENSORLG00000015307	rab11ba	99	98.618	ENSATEG00000023730	rab11ba	99	98.618	Anabas_testudineus
ENSORLG00000015307	rab11ba	99	95.853	ENSANAG00000037616	RAB11B	99	95.853	Aotus_nancymaae
ENSORLG00000015307	rab11ba	99	96.313	ENSACLG00000005420	rab11ba	99	96.313	Astatotilapia_calliptera
ENSORLG00000015307	rab11ba	93	88.177	ENSACLG00000018852	-	92	88.177	Astatotilapia_calliptera
ENSORLG00000015307	rab11ba	99	78.802	WBGene00004274	rab-11.1	99	78.802	Caenorhabditis_elegans
ENSORLG00000015307	rab11ba	99	95.853	ENSCJAG00000010778	RAB11B	99	95.853	Callithrix_jacchus
ENSORLG00000015307	rab11ba	99	95.853	ENSCAFG00000032060	RAB11B	99	95.853	Canis_familiaris
ENSORLG00000015307	rab11ba	99	95.853	ENSCAFG00020022184	RAB11B	99	95.853	Canis_lupus_dingo
ENSORLG00000015307	rab11ba	99	95.853	ENSTSYG00000014758	RAB11B	99	95.853	Carlito_syrichta
ENSORLG00000015307	rab11ba	99	95.392	ENSCPOG00000030154	RAB11B	99	95.392	Cavia_porcellus
ENSORLG00000015307	rab11ba	99	95.853	ENSCCAG00000031042	RAB11B	99	95.853	Cebus_capucinus
ENSORLG00000015307	rab11ba	99	95.853	ENSCLAG00000003207	RAB11B	99	95.853	Chinchilla_lanigera
ENSORLG00000015307	rab11ba	99	95.853	ENSCSAG00000008024	RAB11B	99	95.853	Chlorocebus_sabaeus
ENSORLG00000015307	rab11ba	99	81.567	ENSCHOG00000013525	RAB11B	99	81.567	Choloepus_hoffmanni
ENSORLG00000015307	rab11ba	99	82.488	ENSCING00000009526	-	99	82.488	Ciona_intestinalis
ENSORLG00000015307	rab11ba	99	95.853	ENSCANG00000040517	RAB11B	99	95.853	Colobus_angolensis_palliatus
ENSORLG00000015307	rab11ba	99	95.853	ENSCGRG00001013827	Rab11b	99	95.853	Cricetulus_griseus_chok1gshd
ENSORLG00000015307	rab11ba	99	95.853	ENSCGRG00000010967	Rab11b	99	95.853	Cricetulus_griseus_crigri
ENSORLG00000015307	rab11ba	99	97.222	ENSCSEG00000007121	rab11ba	84	97.222	Cynoglossus_semilaevis
ENSORLG00000015307	rab11ba	99	93.548	ENSDARG00000041878	rab11ba	99	93.548	Danio_rerio
ENSORLG00000015307	rab11ba	99	95.853	ENSDNOG00000014618	RAB11B	96	95.853	Dasypus_novemcinctus
ENSORLG00000015307	rab11ba	99	94.009	ENSDNOG00000004134	-	99	94.009	Dasypus_novemcinctus
ENSORLG00000015307	rab11ba	99	95.853	ENSDORG00000006304	Rab11b	99	95.853	Dipodomys_ordii
ENSORLG00000015307	rab11ba	99	91.705	ENSEBUG00000011775	rab11ba	98	91.705	Eptatretus_burgeri
ENSORLG00000015307	rab11ba	99	81.106	ENSEBUG00000015447	-	99	81.106	Eptatretus_burgeri
ENSORLG00000015307	rab11ba	66	100.000	ENSEEUG00000009165	-	100	100.000	Erinaceus_europaeus
ENSORLG00000015307	rab11ba	89	92.268	ENSELUG00000019240	-	99	92.268	Esox_lucius
ENSORLG00000015307	rab11ba	99	95.392	ENSFCAG00000015216	RAB11B	99	95.392	Felis_catus
ENSORLG00000015307	rab11ba	99	95.392	ENSFDAG00000019872	RAB11B	99	95.392	Fukomys_damarensis
ENSORLG00000015307	rab11ba	99	98.157	ENSFHEG00000022642	rab11ba	99	98.157	Fundulus_heteroclitus
ENSORLG00000015307	rab11ba	99	94.009	ENSGMOG00000007390	rab11ba	99	94.009	Gadus_morhua
ENSORLG00000015307	rab11ba	99	98.618	ENSGAFG00000005679	rab11ba	99	98.618	Gambusia_affinis
ENSORLG00000015307	rab11ba	99	95.853	ENSGAGG00000012557	-	99	95.853	Gopherus_agassizii
ENSORLG00000015307	rab11ba	99	95.853	ENSHGLG00000014984	RAB11B	99	95.853	Heterocephalus_glaber_female
ENSORLG00000015307	rab11ba	99	95.853	ENSHGLG00100003638	RAB11B	99	95.853	Heterocephalus_glaber_male
ENSORLG00000015307	rab11ba	99	95.853	ENSSTOG00000031571	RAB11B	99	95.853	Ictidomys_tridecemlineatus
ENSORLG00000015307	rab11ba	99	95.853	ENSJJAG00000018891	Rab11b	99	95.853	Jaculus_jaculus
ENSORLG00000015307	rab11ba	99	99.078	ENSKMAG00000006082	-	99	99.078	Kryptolebias_marmoratus
ENSORLG00000015307	rab11ba	99	95.392	ENSLBEG00000006087	rab11ba	99	95.392	Labrus_bergylta
ENSORLG00000015307	rab11ba	78	98.824	ENSLACG00000016974	RAB11B	99	98.824	Latimeria_chalumnae
ENSORLG00000015307	rab11ba	99	95.853	ENSLAFG00000013598	RAB11B	99	95.853	Loxodonta_africana
ENSORLG00000015307	rab11ba	99	95.853	ENSMNEG00000039759	-	99	95.853	Macaca_nemestrina
ENSORLG00000015307	rab11ba	99	97.696	ENSMAMG00000018556	rab11ba	99	97.696	Mastacembelus_armatus
ENSORLG00000015307	rab11ba	93	88.177	ENSMZEG00005019251	-	92	88.177	Maylandia_zebra
ENSORLG00000015307	rab11ba	99	96.313	ENSMZEG00005010947	rab11ba	99	96.313	Maylandia_zebra
ENSORLG00000015307	rab11ba	99	96.313	ENSMAUG00000021579	Rab11b	99	96.313	Mesocricetus_auratus
ENSORLG00000015307	rab11ba	99	95.392	ENSMOCG00000012667	Rab11b	99	95.392	Microtus_ochrogaster
ENSORLG00000015307	rab11ba	99	94.470	ENSMALG00000021949	rab11ba	99	94.470	Monopterus_albus
ENSORLG00000015307	rab11ba	99	95.853	MGP_CAROLIEiJ_G0021415	Rab11b	99	97.973	Mus_caroli
ENSORLG00000015307	rab11ba	99	96.774	ENSMUSG00000077450	Rab11b	99	97.973	Mus_musculus
ENSORLG00000015307	rab11ba	99	95.853	MGP_PahariEiJ_G0020420	Rab11b	99	95.853	Mus_pahari
ENSORLG00000015307	rab11ba	99	95.853	MGP_SPRETEiJ_G0022327	Rab11b	99	97.973	Mus_spretus
ENSORLG00000015307	rab11ba	99	95.392	ENSMPUG00000007263	RAB11B	99	95.392	Mustela_putorius_furo
ENSORLG00000015307	rab11ba	99	91.364	ENSMLUG00000002308	-	99	91.364	Myotis_lucifugus
ENSORLG00000015307	rab11ba	99	95.853	ENSNGAG00000015757	Rab11b	99	95.853	Nannospalax_galili
ENSORLG00000015307	rab11ba	99	96.774	ENSNBRG00000023898	rab11ba	83	96.774	Neolamprologus_brichardi
ENSORLG00000015307	rab11ba	99	95.853	ENSNLEG00000001733	RAB11B	99	95.853	Nomascus_leucogenys
ENSORLG00000015307	rab11ba	99	95.853	ENSODEG00000011371	RAB11B	99	95.853	Octodon_degus
ENSORLG00000015307	rab11ba	99	97.235	ENSONIG00000002535	rab11ba	99	97.235	Oreochromis_niloticus
ENSORLG00000015307	rab11ba	74	97.516	ENSOCUG00000028208	RAB11B	64	97.516	Oryctolagus_cuniculus
ENSORLG00000015307	rab11ba	100	100.000	ENSORLG00020020816	rab11ba	100	100.000	Oryzias_latipes_hni
ENSORLG00000015307	rab11ba	99	100.000	ENSORLG00015016946	rab11ba	81	100.000	Oryzias_latipes_hsok
ENSORLG00000015307	rab11ba	100	100.000	ENSOMEG00000002581	rab11ba	100	100.000	Oryzias_melastigma
ENSORLG00000015307	rab11ba	99	95.853	ENSOGAG00000003227	RAB11B	99	95.853	Otolemur_garnettii
ENSORLG00000015307	rab11ba	99	95.853	ENSOARG00000003801	RAB11B	96	95.853	Ovis_aries
ENSORLG00000015307	rab11ba	80	97.701	ENSPPRG00000010160	RAB11B	85	97.701	Panthera_pardus
ENSORLG00000015307	rab11ba	99	95.853	ENSPEMG00000014536	Rab11b	99	95.853	Peromyscus_maniculatus_bairdii
ENSORLG00000015307	rab11ba	94	80.383	ENSPMAG00000009335	-	99	80.383	Petromyzon_marinus
ENSORLG00000015307	rab11ba	99	99.078	ENSPFOG00000006159	rab11ba	99	99.078	Poecilia_formosa
ENSORLG00000015307	rab11ba	99	99.078	ENSPLAG00000014243	rab11ba	99	99.078	Poecilia_latipinna
ENSORLG00000015307	rab11ba	99	99.078	ENSPMEG00000007917	rab11ba	75	99.078	Poecilia_mexicana
ENSORLG00000015307	rab11ba	99	99.078	ENSPREG00000006357	rab11ba	78	99.078	Poecilia_reticulata
ENSORLG00000015307	rab11ba	99	95.853	ENSPPYG00000009504	RAB11B	99	95.853	Pongo_abelii
ENSORLG00000015307	rab11ba	99	87.097	ENSPCAG00000016118	RAB11B	99	87.097	Procavia_capensis
ENSORLG00000015307	rab11ba	67	97.945	ENSPCOG00000008655	-	100	97.945	Propithecus_coquereli
ENSORLG00000015307	rab11ba	99	95.853	ENSPCOG00000028053	RAB11B	99	95.853	Propithecus_coquereli
ENSORLG00000015307	rab11ba	99	95.853	ENSPVAG00000009645	RAB11B	99	95.853	Pteropus_vampyrus
ENSORLG00000015307	rab11ba	93	79.024	ENSPNYG00000023810	-	90	79.024	Pundamilia_nyererei
ENSORLG00000015307	rab11ba	99	96.313	ENSPNYG00000019644	rab11ba	99	96.313	Pundamilia_nyererei
ENSORLG00000015307	rab11ba	99	95.392	ENSPNAG00000006431	-	99	95.392	Pygocentrus_nattereri
ENSORLG00000015307	rab11ba	99	94.931	ENSPNAG00000020475	rab11ba	99	94.931	Pygocentrus_nattereri
ENSORLG00000015307	rab11ba	99	95.853	ENSRNOG00000007648	Rab11b	99	95.853	Rattus_norvegicus
ENSORLG00000015307	rab11ba	99	95.853	ENSSBOG00000035094	RAB11B	99	95.853	Saimiri_boliviensis_boliviensis
ENSORLG00000015307	rab11ba	99	99.078	ENSSDUG00000002965	rab11ba	99	99.078	Seriola_dumerili
ENSORLG00000015307	rab11ba	99	99.078	ENSSLDG00000005221	rab11ba	99	99.078	Seriola_lalandi_dorsalis
ENSORLG00000015307	rab11ba	99	97.235	ENSSPAG00000017313	rab11ba	99	97.235	Stegastes_partitus
ENSORLG00000015307	rab11ba	99	95.853	ENSSSCG00000013600	RAB11B	99	95.853	Sus_scrofa
ENSORLG00000015307	rab11ba	59	100.000	ENSTBEG00000014750	-	100	100.000	Tupaia_belangeri
ENSORLG00000015307	rab11ba	99	95.853	ENSTTRG00000009758	RAB11B	99	95.853	Tursiops_truncatus
ENSORLG00000015307	rab11ba	94	77.561	ENSUMAG00000014594	RAB11B	97	77.561	Ursus_maritimus
ENSORLG00000015307	rab11ba	99	95.853	ENSVVUG00000025210	RAB11B	99	95.853	Vulpes_vulpes
ENSORLG00000015307	rab11ba	99	94.470	ENSXETG00000021890	rab11b.2	99	94.470	Xenopus_tropicalis
ENSORLG00000015307	rab11ba	61	97.744	ENSXCOG00000009194	-	98	97.744	Xiphophorus_couchianus
ENSORLG00000015307	rab11ba	99	98.618	ENSXMAG00000013416	rab11ba	99	98.618	Xiphophorus_maculatus