EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000015338 (Gene tree)
Gene ID: 101158983
Gene Symbol: sympk
Alias: -
Full Name: symplekin
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 8557 bases
Position: chr21:16685187-16693743
Accession: 101158983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000037777	Symplekin_C	PF12295.8	5.6e-74	1	1
ENSORLP00000019209	Symplekin_C	PF12295.8	5.9e-74	1	1
ENSORLP00000031821	Symplekin_C	PF12295.8	1.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000019210	-	4065	XM_023951218	ENSORLP00000019209	1212 (aa)	XP_023806986	H2MKJ4
ENSORLT00000043633	-	4274	-	ENSORLP00000037777	1162 (aa)	-	-
ENSORLT00000040862	-	2943	-	ENSORLP00000031821	980 (aa)	-	-

Gene Model

Click here to download ENSORLG00000015338's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03015	mRNA surveillance pathway	KEGG
ola04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000015338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000015338	sympk	96	74.473	ENSG00000125755	SYMPK	85	81.197	Homo_sapiens
ENSORLG00000015338	sympk	97	90.292	ENSAPOG00000015934	sympk	97	90.098	Acanthochromis_polyacanthus
ENSORLG00000015338	sympk	96	74.446	ENSAMEG00000000680	SYMPK	86	75.159	Ailuropoda_melanoleuca
ENSORLG00000015338	sympk	95	90.598	ENSACIG00000006357	sympk	99	86.299	Amphilophus_citrinellus
ENSORLG00000015338	sympk	97	90.292	ENSAOCG00000024124	sympk	100	87.244	Amphiprion_ocellaris
ENSORLG00000015338	sympk	97	90.188	ENSAPEG00000003465	sympk	100	87.163	Amphiprion_percula
ENSORLG00000015338	sympk	96	91.543	ENSATEG00000008472	sympk	99	88.036	Anabas_testudineus
ENSORLG00000015338	sympk	86	75.502	ENSACAG00000004126	SYMPK	83	75.502	Anolis_carolinensis
ENSORLG00000015338	sympk	97	74.343	ENSANAG00000021087	SYMPK	97	76.099	Aotus_nancymaae
ENSORLG00000015338	sympk	97	90.073	ENSACLG00000001813	sympk	100	86.330	Astatotilapia_calliptera
ENSORLG00000015338	sympk	96	82.030	ENSAMXG00000013677	sympk	91	82.558	Astyanax_mexicanus
ENSORLG00000015338	sympk	96	74.340	ENSBTAG00000012101	SYMPK	86	75.159	Bos_taurus
ENSORLG00000015338	sympk	96	74.340	ENSCJAG00000012172	SYMPK	97	74.258	Callithrix_jacchus
ENSORLG00000015338	sympk	96	74.446	ENSCAFG00000004376	SYMPK	86	75.159	Canis_familiaris
ENSORLG00000015338	sympk	96	74.446	ENSCAFG00020001815	SYMPK	86	75.159	Canis_lupus_dingo
ENSORLG00000015338	sympk	96	74.446	ENSCHIG00000026784	SYMPK	86	75.090	Capra_hircus
ENSORLG00000015338	sympk	98	73.554	ENSTSYG00000006268	SYMPK	95	74.863	Carlito_syrichta
ENSORLG00000015338	sympk	94	73.226	ENSCAPG00000005112	SYMPK	94	73.529	Cavia_aperea
ENSORLG00000015338	sympk	96	74.473	ENSCPOG00000010434	SYMPK	87	75.686	Cavia_porcellus
ENSORLG00000015338	sympk	96	74.578	ENSCCAG00000036309	SYMPK	97	75.875	Cebus_capucinus
ENSORLG00000015338	sympk	96	74.578	ENSCATG00000045107	SYMPK	98	75.852	Cercocebus_atys
ENSORLG00000015338	sympk	96	74.367	ENSCLAG00000001206	SYMPK	86	74.932	Chinchilla_lanigera
ENSORLG00000015338	sympk	96	74.578	ENSCSAG00000003115	SYMPK	86	75.272	Chlorocebus_sabaeus
ENSORLG00000015338	sympk	72	90.909	ENSCHOG00000012456	SYMPK	76	90.909	Choloepus_hoffmanni
ENSORLG00000015338	sympk	97	73.990	ENSCPBG00000007170	SYMPK	88	75.226	Chrysemys_picta_bellii
ENSORLG00000015338	sympk	93	47.562	ENSCING00000021232	-	99	47.810	Ciona_intestinalis
ENSORLG00000015338	sympk	93	45.358	ENSCSAVG00000005154	-	100	47.659	Ciona_savignyi
ENSORLG00000015338	sympk	96	73.207	ENSCANG00000040907	SYMPK	97	73.827	Colobus_angolensis_palliatus
ENSORLG00000015338	sympk	88	74.008	ENSCGRG00001010086	Sympk	83	76.308	Cricetulus_griseus_chok1gshd
ENSORLG00000015338	sympk	97	88.598	ENSCSEG00000016802	sympk	99	83.713	Cynoglossus_semilaevis
ENSORLG00000015338	sympk	97	80.942	ENSDARG00000059553	sympk	90	81.150	Danio_rerio
ENSORLG00000015338	sympk	96	74.125	ENSDNOG00000016149	SYMPK	85	75.000	Dasypus_novemcinctus
ENSORLG00000015338	sympk	95	34.755	FBgn0037371	Sym	91	37.222	Drosophila_melanogaster
ENSORLG00000015338	sympk	79	57.068	ENSEBUG00000000387	sympk	89	60.000	Eptatretus_burgeri
ENSORLG00000015338	sympk	96	74.446	ENSEASG00005014227	SYMPK	86	75.090	Equus_asinus_asinus
ENSORLG00000015338	sympk	96	74.446	ENSECAG00000008163	SYMPK	86	75.090	Equus_caballus
ENSORLG00000015338	sympk	70	80.788	ENSEEUG00000000270	-	78	80.435	Erinaceus_europaeus
ENSORLG00000015338	sympk	96	84.388	ENSELUG00000000850	sympk	98	79.160	Esox_lucius
ENSORLG00000015338	sympk	96	74.446	ENSFCAG00000007337	SYMPK	86	75.159	Felis_catus
ENSORLG00000015338	sympk	96	74.051	ENSFDAG00000011272	SYMPK	86	75.320	Fukomys_damarensis
ENSORLG00000015338	sympk	97	88.075	ENSFHEG00000010274	sympk	100	84.660	Fundulus_heteroclitus
ENSORLG00000015338	sympk	95	83.923	ENSGMOG00000002357	sympk	99	83.919	Gadus_morhua
ENSORLG00000015338	sympk	97	86.192	ENSGAFG00000010976	sympk	100	82.637	Gambusia_affinis
ENSORLG00000015338	sympk	96	87.580	ENSGACG00000002735	sympk	99	87.276	Gasterosteus_aculeatus
ENSORLG00000015338	sympk	60	73.752	ENSGAGG00000012538	-	88	73.485	Gopherus_agassizii
ENSORLG00000015338	sympk	96	74.473	ENSGGOG00000003410	SYMPK	95	75.497	Gorilla_gorilla
ENSORLG00000015338	sympk	97	90.178	ENSHBUG00000023564	sympk	100	86.330	Haplochromis_burtoni
ENSORLG00000015338	sympk	96	69.515	ENSHGLG00000005228	SYMPK	86	71.105	Heterocephalus_glaber_female
ENSORLG00000015338	sympk	96	74.262	ENSHGLG00100018571	SYMPK	89	74.620	Heterocephalus_glaber_male
ENSORLG00000015338	sympk	96	82.203	ENSHCOG00000017400	sympk	91	82.815	Hippocampus_comes
ENSORLG00000015338	sympk	96	81.395	ENSIPUG00000024020	SYMPK	89	82.609	Ictalurus_punctatus
ENSORLG00000015338	sympk	96	74.551	ENSSTOG00000001534	SYMPK	85	75.755	Ictidomys_tridecemlineatus
ENSORLG00000015338	sympk	96	74.578	ENSJJAG00000006633	Sympk	86	75.453	Jaculus_jaculus
ENSORLG00000015338	sympk	97	89.540	ENSKMAG00000016292	sympk	99	86.031	Kryptolebias_marmoratus
ENSORLG00000015338	sympk	97	88.935	ENSLBEG00000027913	sympk	100	85.691	Labrus_bergylta
ENSORLG00000015338	sympk	94	68.636	ENSLACG00000016497	SYMPK	90	70.745	Latimeria_chalumnae
ENSORLG00000015338	sympk	96	74.628	ENSLAFG00000008726	SYMPK	86	75.249	Loxodonta_africana
ENSORLG00000015338	sympk	96	74.578	ENSMMUG00000015428	SYMPK	94	74.725	Macaca_mulatta
ENSORLG00000015338	sympk	96	74.684	ENSMNEG00000019439	SYMPK	98	75.947	Macaca_nemestrina
ENSORLG00000015338	sympk	96	74.578	ENSMLEG00000040508	SYMPK	98	75.852	Mandrillus_leucophaeus
ENSORLG00000015338	sympk	97	89.770	ENSMAMG00000010486	sympk	100	86.405	Mastacembelus_armatus
ENSORLG00000015338	sympk	97	90.073	ENSMZEG00005014146	sympk	100	86.330	Maylandia_zebra
ENSORLG00000015338	sympk	96	74.262	ENSMAUG00000015657	Sympk	84	75.115	Mesocricetus_auratus
ENSORLG00000015338	sympk	97	74.132	ENSMICG00000001871	SYMPK	90	74.160	Microcebus_murinus
ENSORLG00000015338	sympk	96	74.129	ENSMOCG00000008388	Sympk	85	75.297	Microtus_ochrogaster
ENSORLG00000015338	sympk	96	87.394	ENSMMOG00000019227	sympk	99	82.479	Mola_mola
ENSORLG00000015338	sympk	95	74.733	ENSMODG00000021534	SYMPK	84	76.111	Monodelphis_domestica
ENSORLG00000015338	sympk	95	85.197	ENSMALG00000008347	sympk	96	86.262	Monopterus_albus
ENSORLG00000015338	sympk	96	74.340	MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	Mus_caroli
ENSORLG00000015338	sympk	96	74.234	ENSMUSG00000023118	Sympk	76	85.321	Mus_musculus
ENSORLG00000015338	sympk	96	74.367	MGP_PahariEiJ_G0021127	Sympk	77	85.321	Mus_pahari
ENSORLG00000015338	sympk	96	74.340	MGP_SPRETEiJ_G0030351	-	77	85.321	Mus_spretus
ENSORLG00000015338	sympk	96	73.073	ENSMPUG00000005505	SYMPK	86	73.827	Mustela_putorius_furo
ENSORLG00000015338	sympk	77	72.253	ENSMLUG00000001359	SYMPK	89	72.253	Myotis_lucifugus
ENSORLG00000015338	sympk	96	74.367	ENSNGAG00000000820	Sympk	85	75.758	Nannospalax_galili
ENSORLG00000015338	sympk	93	91.238	ENSNBRG00000018101	sympk	96	89.741	Neolamprologus_brichardi
ENSORLG00000015338	sympk	96	63.485	ENSNLEG00000002369	SYMPK	85	63.950	Nomascus_leucogenys
ENSORLG00000015338	sympk	69	86.735	ENSMEUG00000003866	SYMPK	66	82.937	Notamacropus_eugenii
ENSORLG00000015338	sympk	96	74.262	ENSOPRG00000009967	SYMPK	85	74.244	Ochotona_princeps
ENSORLG00000015338	sympk	96	74.684	ENSODEG00000007519	SYMPK	86	75.023	Octodon_degus
ENSORLG00000015338	sympk	96	89.695	ENSONIG00000016802	sympk	99	88.772	Oreochromis_niloticus
ENSORLG00000015338	sympk	96	74.156	ENSOCUG00000005511	SYMPK	90	72.671	Oryctolagus_cuniculus
ENSORLG00000015338	sympk	100	99.257	ENSORLG00020004402	sympk	100	99.257	Oryzias_latipes_hni
ENSORLG00000015338	sympk	100	99.257	ENSORLG00015005712	sympk	100	99.257	Oryzias_latipes_hsok
ENSORLG00000015338	sympk	100	94.884	ENSOMEG00000022561	sympk	100	94.884	Oryzias_melastigma
ENSORLG00000015338	sympk	96	74.578	ENSOGAG00000013483	SYMPK	86	75.362	Otolemur_garnettii
ENSORLG00000015338	sympk	96	71.563	ENSOARG00000010349	SYMPK	85	72.903	Ovis_aries
ENSORLG00000015338	sympk	96	74.473	ENSPPAG00000043204	SYMPK	94	74.588	Pan_paniscus
ENSORLG00000015338	sympk	96	74.446	ENSPPRG00000004282	SYMPK	86	75.159	Panthera_pardus
ENSORLG00000015338	sympk	96	74.446	ENSPTIG00000015420	SYMPK	93	74.797	Panthera_tigris_altaica
ENSORLG00000015338	sympk	96	74.473	ENSPTRG00000011169	SYMPK	94	74.588	Pan_troglodytes
ENSORLG00000015338	sympk	96	74.578	ENSPANG00000019930	SYMPK	98	75.852	Papio_anubis
ENSORLG00000015338	sympk	96	83.579	ENSPKIG00000017132	sympk	93	81.114	Paramormyrops_kingsleyae
ENSORLG00000015338	sympk	96	74.367	ENSPEMG00000007564	Sympk	85	75.666	Peromyscus_maniculatus_bairdii
ENSORLG00000015338	sympk	89	63.889	ENSPMAG00000004936	sympk	100	63.985	Petromyzon_marinus
ENSORLG00000015338	sympk	96	74.947	ENSPCIG00000024476	SYMPK	90	73.257	Phascolarctos_cinereus
ENSORLG00000015338	sympk	97	86.402	ENSPFOG00000001194	sympk	100	82.773	Poecilia_formosa
ENSORLG00000015338	sympk	97	86.402	ENSPLAG00000012995	sympk	100	82.773	Poecilia_latipinna
ENSORLG00000015338	sympk	97	86.297	ENSPMEG00000008099	sympk	100	82.691	Poecilia_mexicana
ENSORLG00000015338	sympk	97	85.983	ENSPREG00000006176	sympk	100	82.078	Poecilia_reticulata
ENSORLG00000015338	sympk	96	74.473	ENSPPYG00000010135	SYMPK	97	75.389	Pongo_abelii
ENSORLG00000015338	sympk	88	76.898	ENSPCAG00000005182	SYMPK	79	76.906	Procavia_capensis
ENSORLG00000015338	sympk	96	74.262	ENSPCOG00000023740	SYMPK	98	75.545	Propithecus_coquereli
ENSORLG00000015338	sympk	96	72.650	ENSPVAG00000001355	SYMPK	89	73.646	Pteropus_vampyrus
ENSORLG00000015338	sympk	97	90.073	ENSPNYG00000011455	sympk	100	85.864	Pundamilia_nyererei
ENSORLG00000015338	sympk	97	82.809	ENSPNAG00000016505	sympk	90	82.462	Pygocentrus_nattereri
ENSORLG00000015338	sympk	96	74.367	ENSRNOG00000014353	Sympk	84	75.666	Rattus_norvegicus
ENSORLG00000015338	sympk	98	72.653	ENSRBIG00000040963	SYMPK	97	76.077	Rhinopithecus_bieti
ENSORLG00000015338	sympk	98	72.579	ENSRROG00000024834	SYMPK	95	75.787	Rhinopithecus_roxellana
ENSORLG00000015338	sympk	98	73.368	ENSSBOG00000034497	SYMPK	96	74.588	Saimiri_boliviensis_boliviensis
ENSORLG00000015338	sympk	96	73.941	ENSSHAG00000003139	SYMPK	95	74.682	Sarcophilus_harrisii
ENSORLG00000015338	sympk	96	82.322	ENSSFOG00015006974	sympk	89	83.318	Scleropages_formosus
ENSORLG00000015338	sympk	97	89.435	ENSSMAG00000018130	sympk	81	84.622	Scophthalmus_maximus
ENSORLG00000015338	sympk	97	90.900	ENSSDUG00000007092	sympk	100	87.398	Seriola_dumerili
ENSORLG00000015338	sympk	97	90.900	ENSSLDG00000014774	sympk	100	87.316	Seriola_lalandi_dorsalis
ENSORLG00000015338	sympk	56	84.571	ENSSARG00000004274	-	57	84.571	Sorex_araneus
ENSORLG00000015338	sympk	96	74.497	ENSSPUG00000002789	SYMPK	83	75.919	Sphenodon_punctatus
ENSORLG00000015338	sympk	97	90.084	ENSSPAG00000000854	sympk	100	87.490	Stegastes_partitus
ENSORLG00000015338	sympk	96	74.023	ENSSSCG00000003093	SYMPK	86	74.796	Sus_scrofa
ENSORLG00000015338	sympk	97	87.120	ENSTRUG00000010202	sympk	100	82.719	Takifugu_rubripes
ENSORLG00000015338	sympk	97	86.555	ENSTNIG00000017855	sympk	96	87.845	Tetraodon_nigroviridis
ENSORLG00000015338	sympk	89	85.938	ENSTBEG00000000454	SYMPK	75	88.889	Tupaia_belangeri
ENSORLG00000015338	sympk	96	64.942	ENSTTRG00000014311	SYMPK	86	66.999	Tursiops_truncatus
ENSORLG00000015338	sympk	95	72.834	ENSUAMG00000022272	SYMPK	94	73.226	Ursus_americanus
ENSORLG00000015338	sympk	96	74.446	ENSUMAG00000023698	SYMPK	86	75.159	Ursus_maritimus
ENSORLG00000015338	sympk	96	74.446	ENSVVUG00000003024	SYMPK	95	75.479	Vulpes_vulpes
ENSORLG00000015338	sympk	95	68.288	ENSXETG00000024453	sympk	89	69.770	Xenopus_tropicalis
ENSORLG00000015338	sympk	95	85.410	ENSXCOG00000015368	sympk	100	87.049	Xiphophorus_couchianus
ENSORLG00000015338	sympk	97	86.297	ENSXMAG00000005737	sympk	99	82.662	Xiphophorus_maculatus