EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000015654 (Gene tree)
Gene ID: 101163437
Gene Symbol: snrnp48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 8329 bases
Position: chr16:26575971-26584299
Accession: 101163437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000019601	zf-U11-48K	PF05253.12	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000019602	-	4526	XM_020710374	ENSORLP00000019601	341 (aa)	XP_020566033	H2MLM2

Gene Model

Click here to download ENSORLG00000015654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000015654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000015654	snrnp48	82	47.241	ENSG00000168566	SNRNP48	88	46.753	Homo_sapiens
ENSORLG00000015654	snrnp48	94	79.938	ENSAPOG00000021430	snrnp48	88	80.537	Acanthochromis_polyacanthus
ENSORLG00000015654	snrnp48	96	46.243	ENSAMEG00000017349	SNRNP48	89	47.742	Ailuropoda_melanoleuca
ENSORLG00000015654	snrnp48	92	74.448	ENSACIG00000002032	snrnp48	87	75.084	Amphilophus_citrinellus
ENSORLG00000015654	snrnp48	94	79.938	ENSAOCG00000010562	snrnp48	88	79.866	Amphiprion_ocellaris
ENSORLG00000015654	snrnp48	94	79.567	ENSAPEG00000003231	snrnp48	88	79.461	Amphiprion_percula
ENSORLG00000015654	snrnp48	91	80.063	ENSATEG00000020210	snrnp48	88	79.661	Anabas_testudineus
ENSORLG00000015654	snrnp48	81	49.492	ENSACAG00000002811	SNRNP48	80	50.379	Anolis_carolinensis
ENSORLG00000015654	snrnp48	82	47.586	ENSANAG00000033538	SNRNP48	88	47.078	Aotus_nancymaae
ENSORLG00000015654	snrnp48	93	57.500	ENSAMXG00000015309	snrnp48	89	59.661	Astyanax_mexicanus
ENSORLG00000015654	snrnp48	90	44.311	ENSBTAG00000001123	SNRNP48	87	46.885	Bos_taurus
ENSORLG00000015654	snrnp48	82	47.586	ENSCJAG00000021330	SNRNP48	88	47.078	Callithrix_jacchus
ENSORLG00000015654	snrnp48	93	44.868	ENSCAFG00000009574	SNRNP48	74	46.429	Canis_familiaris
ENSORLG00000015654	snrnp48	93	44.868	ENSCAFG00020013203	SNRNP48	88	46.429	Canis_lupus_dingo
ENSORLG00000015654	snrnp48	90	44.611	ENSCHIG00000015216	SNRNP48	89	46.774	Capra_hircus
ENSORLG00000015654	snrnp48	81	48.421	ENSTSYG00000000698	SNRNP48	87	47.525	Carlito_syrichta
ENSORLG00000015654	snrnp48	85	45.397	ENSCAPG00000006768	SNRNP48	88	48.375	Cavia_aperea
ENSORLG00000015654	snrnp48	94	44.509	ENSCPOG00000007910	SNRNP48	88	47.078	Cavia_porcellus
ENSORLG00000015654	snrnp48	82	47.241	ENSCCAG00000035652	SNRNP48	88	46.753	Cebus_capucinus
ENSORLG00000015654	snrnp48	94	44.509	ENSCATG00000033947	SNRNP48	88	46.753	Cercocebus_atys
ENSORLG00000015654	snrnp48	81	48.421	ENSCLAG00000003765	SNRNP48	87	47.855	Chinchilla_lanigera
ENSORLG00000015654	snrnp48	82	47.586	ENSCSAG00000007409	SNRNP48	88	46.753	Chlorocebus_sabaeus
ENSORLG00000015654	snrnp48	82	48.505	ENSCPBG00000019146	SNRNP48	78	51.807	Chrysemys_picta_bellii
ENSORLG00000015654	snrnp48	82	47.586	ENSCANG00000030017	SNRNP48	88	47.078	Colobus_angolensis_palliatus
ENSORLG00000015654	snrnp48	83	40.753	ENSCGRG00001008805	-	72	44.444	Cricetulus_griseus_chok1gshd
ENSORLG00000015654	snrnp48	96	44.575	ENSCGRG00001001076	-	97	44.543	Cricetulus_griseus_chok1gshd
ENSORLG00000015654	snrnp48	96	44.575	ENSCGRG00000007781	Snrnp48	97	44.543	Cricetulus_griseus_crigri
ENSORLG00000015654	snrnp48	77	70.412	ENSCSEG00000000722	snrnp48	84	68.456	Cynoglossus_semilaevis
ENSORLG00000015654	snrnp48	91	75.159	ENSCVAG00000019829	snrnp48	77	77.852	Cyprinodon_variegatus
ENSORLG00000015654	snrnp48	89	54.232	ENSDARG00000039989	snrnp48	87	55.743	Danio_rerio
ENSORLG00000015654	snrnp48	84	47.635	ENSDNOG00000014978	SNRNP48	87	47.697	Dasypus_novemcinctus
ENSORLG00000015654	snrnp48	94	44.092	ENSDORG00000015140	Snrnp48	89	46.602	Dipodomys_ordii
ENSORLG00000015654	snrnp48	82	47.079	ENSEASG00005012021	SNRNP48	89	46.278	Equus_asinus_asinus
ENSORLG00000015654	snrnp48	82	47.423	ENSECAG00000026937	SNRNP48	89	46.602	Equus_caballus
ENSORLG00000015654	snrnp48	96	31.884	ENSEEUG00000015437	SNRNP48	97	30.294	Erinaceus_europaeus
ENSORLG00000015654	snrnp48	87	61.039	ENSELUG00000009766	snrnp48	85	61.111	Esox_lucius
ENSORLG00000015654	snrnp48	82	47.241	ENSFCAG00000018853	SNRNP48	88	45.455	Felis_catus
ENSORLG00000015654	snrnp48	68	56.667	ENSFALG00000007797	SNRNP48	76	56.017	Ficedula_albicollis
ENSORLG00000015654	snrnp48	94	44.798	ENSFDAG00000009231	SNRNP48	88	47.727	Fukomys_damarensis
ENSORLG00000015654	snrnp48	65	80.973	ENSFHEG00000014647	snrnp48	86	80.723	Fundulus_heteroclitus
ENSORLG00000015654	snrnp48	87	61.950	ENSGMOG00000018599	-	95	63.487	Gadus_morhua
ENSORLG00000015654	snrnp48	75	53.933	ENSGALG00000013005	SNRNP48	86	54.264	Gallus_gallus
ENSORLG00000015654	snrnp48	94	70.859	ENSGAFG00000021639	snrnp48	87	74.497	Gambusia_affinis
ENSORLG00000015654	snrnp48	71	76.829	ENSGACG00000017756	-	90	73.090	Gasterosteus_aculeatus
ENSORLG00000015654	snrnp48	82	47.508	ENSGAGG00000000865	SNRNP48	81	51.004	Gopherus_agassizii
ENSORLG00000015654	snrnp48	82	47.586	ENSGGOG00000013220	SNRNP48	88	47.078	Gorilla_gorilla
ENSORLG00000015654	snrnp48	92	78.549	ENSHBUG00000017066	snrnp48	87	79.798	Haplochromis_burtoni
ENSORLG00000015654	snrnp48	82	47.586	ENSHGLG00000015241	SNRNP48	88	46.753	Heterocephalus_glaber_female
ENSORLG00000015654	snrnp48	82	47.586	ENSHGLG00100010027	SNRNP48	88	46.753	Heterocephalus_glaber_male
ENSORLG00000015654	snrnp48	73	71.654	ENSHCOG00000014066	snrnp48	88	66.885	Hippocampus_comes
ENSORLG00000015654	snrnp48	82	47.931	ENSSTOG00000014635	SNRNP48	88	47.078	Ictidomys_tridecemlineatus
ENSORLG00000015654	snrnp48	82	47.945	ENSJJAG00000011495	Snrnp48	88	46.906	Jaculus_jaculus
ENSORLG00000015654	snrnp48	94	75.466	ENSKMAG00000016514	snrnp48	88	77.441	Kryptolebias_marmoratus
ENSORLG00000015654	snrnp48	80	75.812	ENSLBEG00000026249	snrnp48	88	76.510	Labrus_bergylta
ENSORLG00000015654	snrnp48	92	47.813	ENSLACG00000003958	SNRNP48	89	49.191	Latimeria_chalumnae
ENSORLG00000015654	snrnp48	80	63.309	ENSLOCG00000004187	snrnp48	87	61.486	Lepisosteus_oculatus
ENSORLG00000015654	snrnp48	81	46.853	ENSLAFG00000011152	SNRNP48	87	45.724	Loxodonta_africana
ENSORLG00000015654	snrnp48	82	47.586	ENSMFAG00000045216	SNRNP48	88	47.078	Macaca_fascicularis
ENSORLG00000015654	snrnp48	82	47.586	ENSMMUG00000014785	SNRNP48	88	47.078	Macaca_mulatta
ENSORLG00000015654	snrnp48	82	47.586	ENSMNEG00000042269	SNRNP48	88	47.078	Macaca_nemestrina
ENSORLG00000015654	snrnp48	82	47.586	ENSMLEG00000034004	SNRNP48	88	47.078	Mandrillus_leucophaeus
ENSORLG00000015654	snrnp48	94	76.398	ENSMAMG00000018673	snrnp48	77	76.174	Mastacembelus_armatus
ENSORLG00000015654	snrnp48	82	51.815	ENSMGAG00000006037	SNRNP48	81	56.379	Meleagris_gallopavo
ENSORLG00000015654	snrnp48	96	44.152	ENSMAUG00000011944	Snrnp48	98	44.118	Mesocricetus_auratus
ENSORLG00000015654	snrnp48	82	47.079	ENSMICG00000012497	SNRNP48	88	46.602	Microcebus_murinus
ENSORLG00000015654	snrnp48	96	44.606	ENSMOCG00000015555	Snrnp48	98	43.695	Microtus_ochrogaster
ENSORLG00000015654	snrnp48	55	84.211	ENSMMOG00000003072	-	60	84.211	Mola_mola
ENSORLG00000015654	snrnp48	82	46.441	ENSMODG00000009996	SNRNP48	85	45.714	Monodelphis_domestica
ENSORLG00000015654	snrnp48	94	74.923	ENSMALG00000005725	snrnp48	88	75.421	Monopterus_albus
ENSORLG00000015654	snrnp48	94	44.509	MGP_CAROLIEiJ_G0018441	Snrnp48	89	47.078	Mus_caroli
ENSORLG00000015654	snrnp48	94	44.798	ENSMUSG00000021431	Snrnp48	89	47.078	Mus_musculus
ENSORLG00000015654	snrnp48	94	45.376	MGP_PahariEiJ_G0019509	Snrnp48	89	47.727	Mus_pahari
ENSORLG00000015654	snrnp48	94	45.087	MGP_SPRETEiJ_G0019321	Snrnp48	89	47.403	Mus_spretus
ENSORLG00000015654	snrnp48	94	45.954	ENSNGAG00000004849	Snrnp48	88	49.026	Nannospalax_galili
ENSORLG00000015654	snrnp48	99	77.843	ENSNBRG00000012127	snrnp48	87	80.135	Neolamprologus_brichardi
ENSORLG00000015654	snrnp48	82	47.586	ENSNLEG00000011667	SNRNP48	88	47.078	Nomascus_leucogenys
ENSORLG00000015654	snrnp48	82	47.387	ENSOPRG00000015471	SNRNP48	92	46.382	Ochotona_princeps
ENSORLG00000015654	snrnp48	92	79.495	ENSONIG00000001520	snrnp48	87	80.471	Oreochromis_niloticus
ENSORLG00000015654	snrnp48	53	36.715	ENSOANG00000019888	-	99	38.164	Ornithorhynchus_anatinus
ENSORLG00000015654	snrnp48	78	48.000	ENSOCUG00000005168	SNRNP48	99	46.753	Oryctolagus_cuniculus
ENSORLG00000015654	snrnp48	100	97.085	ENSORLG00020015976	snrnp48	86	97.085	Oryzias_latipes_hni
ENSORLG00000015654	snrnp48	100	97.361	ENSORLG00015022379	snrnp48	86	97.361	Oryzias_latipes_hsok
ENSORLG00000015654	snrnp48	92	89.809	ENSOMEG00000022007	snrnp48	87	90.476	Oryzias_melastigma
ENSORLG00000015654	snrnp48	81	47.569	ENSOGAG00000005275	SNRNP48	90	46.732	Otolemur_garnettii
ENSORLG00000015654	snrnp48	80	47.279	ENSOARG00000017319	SNRNP48	86	50.980	Ovis_aries
ENSORLG00000015654	snrnp48	82	47.586	ENSPPAG00000032873	SNRNP48	88	47.078	Pan_paniscus
ENSORLG00000015654	snrnp48	82	46.897	ENSPPRG00000004283	SNRNP48	88	45.779	Panthera_pardus
ENSORLG00000015654	snrnp48	68	51.271	ENSPTIG00000013502	SNRNP48	86	49.213	Panthera_tigris_altaica
ENSORLG00000015654	snrnp48	82	47.586	ENSPTRG00000017703	SNRNP48	88	47.078	Pan_troglodytes
ENSORLG00000015654	snrnp48	82	47.586	ENSPANG00000000771	SNRNP48	88	47.078	Papio_anubis
ENSORLG00000015654	snrnp48	80	60.993	ENSPKIG00000013703	snrnp48	60	60.638	Paramormyrops_kingsleyae
ENSORLG00000015654	snrnp48	80	48.148	ENSPSIG00000002213	SNRNP48	76	51.429	Pelodiscus_sinensis
ENSORLG00000015654	snrnp48	77	62.082	ENSPMGG00000008120	snrnp48	92	63.320	Periophthalmus_magnuspinnatus
ENSORLG00000015654	snrnp48	96	43.662	ENSPEMG00000008872	Snrnp48	97	44.477	Peromyscus_maniculatus_bairdii
ENSORLG00000015654	snrnp48	94	73.926	ENSPFOG00000003578	snrnp48	87	75.168	Poecilia_formosa
ENSORLG00000015654	snrnp48	68	75.847	ENSPLAG00000002290	snrnp48	82	75.847	Poecilia_latipinna
ENSORLG00000015654	snrnp48	94	73.926	ENSPMEG00000018033	snrnp48	87	75.168	Poecilia_mexicana
ENSORLG00000015654	snrnp48	94	72.393	ENSPREG00000018541	snrnp48	87	75.839	Poecilia_reticulata
ENSORLG00000015654	snrnp48	82	46.897	ENSPPYG00000016209	SNRNP48	88	46.429	Pongo_abelii
ENSORLG00000015654	snrnp48	69	38.776	ENSPCAG00000011991	SNRNP48	93	38.645	Procavia_capensis
ENSORLG00000015654	snrnp48	82	47.569	ENSPVAG00000002854	SNRNP48	88	47.059	Pteropus_vampyrus
ENSORLG00000015654	snrnp48	90	78.964	ENSPNYG00000015399	snrnp48	95	79.798	Pundamilia_nyererei
ENSORLG00000015654	snrnp48	96	45.161	ENSRNOG00000013756	Snrnp48	89	47.403	Rattus_norvegicus
ENSORLG00000015654	snrnp48	82	47.586	ENSRBIG00000043856	SNRNP48	95	47.078	Rhinopithecus_bieti
ENSORLG00000015654	snrnp48	82	47.586	ENSRROG00000043229	SNRNP48	88	47.078	Rhinopithecus_roxellana
ENSORLG00000015654	snrnp48	82	47.931	ENSSBOG00000019486	SNRNP48	88	47.403	Saimiri_boliviensis_boliviensis
ENSORLG00000015654	snrnp48	82	47.635	ENSSHAG00000014483	SNRNP48	89	47.097	Sarcophilus_harrisii
ENSORLG00000015654	snrnp48	70	62.500	ENSSFOG00015006610	snrnp48	72	60.596	Scleropages_formosus
ENSORLG00000015654	snrnp48	94	75.549	ENSSDUG00000014953	snrnp48	88	76.531	Seriola_dumerili
ENSORLG00000015654	snrnp48	94	75.235	ENSSLDG00000005989	snrnp48	88	76.190	Seriola_lalandi_dorsalis
ENSORLG00000015654	snrnp48	81	47.651	ENSSPUG00000006257	SNRNP48	71	51.394	Sphenodon_punctatus
ENSORLG00000015654	snrnp48	94	78.947	ENSSPAG00000006454	snrnp48	88	78.859	Stegastes_partitus
ENSORLG00000015654	snrnp48	80	50.331	ENSTGUG00000007575	SNRNP48	84	52.830	Taeniopygia_guttata
ENSORLG00000015654	snrnp48	94	64.706	ENSTRUG00000007031	snrnp48	88	70.432	Takifugu_rubripes
ENSORLG00000015654	snrnp48	93	68.634	ENSTNIG00000012977	-	86	68.121	Tetraodon_nigroviridis
ENSORLG00000015654	snrnp48	73	48.462	ENSTBEG00000015620	SNRNP48	75	48.047	Tupaia_belangeri
ENSORLG00000015654	snrnp48	91	45.289	ENSTTRG00000016715	SNRNP48	88	46.906	Tursiops_truncatus
ENSORLG00000015654	snrnp48	96	46.647	ENSUAMG00000003690	SNRNP48	88	47.883	Ursus_americanus
ENSORLG00000015654	snrnp48	68	52.321	ENSVPAG00000003557	SNRNP48	86	50.980	Vicugna_pacos
ENSORLG00000015654	snrnp48	93	44.868	ENSVVUG00000004996	SNRNP48	88	46.429	Vulpes_vulpes
ENSORLG00000015654	snrnp48	86	46.205	ENSXETG00000020447	snrnp48	88	46.465	Xenopus_tropicalis
ENSORLG00000015654	snrnp48	69	75.949	ENSXCOG00000004478	snrnp48	86	68.013	Xiphophorus_couchianus
ENSORLG00000015654	snrnp48	94	74.695	ENSXMAG00000013595	snrnp48	87	75.667	Xiphophorus_maculatus