EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000016030 (Gene tree)
Gene ID: 101160806
Gene Symbol: gnl3
Alias: -
Full Name: G protein nucleolar 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 7001 bases
Position: chr5:28672249-28679249
Accession: 101160806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000030190	GN3L_Grn1	PF08701.11	5.2e-23	1	1
ENSORLP00000020068	GN3L_Grn1	PF08701.11	6e-23	1	1
ENSORLP00000030190	MMR_HSR1	PF01926.23	3e-14	1	1
ENSORLP00000020068	MMR_HSR1	PF01926.23	3.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000020069	-	5162	-	ENSORLP00000020068	591 (aa)	-	H2MMX2
ENSORLT00000036002	-	5245	XM_004069159	ENSORLP00000030190	541 (aa)	XP_004069207	UPI0000E9D20C

Gene Model

Click here to download ENSORLG00000016030's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000016030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000016030	gnl3	76	40.435	ENSORLG00000014117	gnl3l	75	41.629

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000016030	gnl3	99	45.263	ENSG00000163938	GNL3	100	50.000	Homo_sapiens
ENSORLG00000016030	gnl3	100	71.454	ENSAPOG00000004048	gnl3	100	72.352	Acanthochromis_polyacanthus
ENSORLG00000016030	gnl3	99	42.349	ENSAMEG00000008456	GNL3	99	41.964	Ailuropoda_melanoleuca
ENSORLG00000016030	gnl3	100	68.556	ENSACIG00000000545	gnl3	100	68.556	Amphilophus_citrinellus
ENSORLG00000016030	gnl3	100	71.813	ENSAOCG00000012879	gnl3	100	71.813	Amphiprion_ocellaris
ENSORLG00000016030	gnl3	100	71.301	ENSAPEG00000006146	gnl3	100	70.945	Amphiprion_percula
ENSORLG00000016030	gnl3	100	70.916	ENSATEG00000024242	gnl3	100	70.916	Anabas_testudineus
ENSORLG00000016030	gnl3	82	51.778	ENSAPLG00000005171	GNL3	99	47.514	Anas_platyrhynchos
ENSORLG00000016030	gnl3	99	47.842	ENSACAG00000007357	GNL3	99	48.474	Anolis_carolinensis
ENSORLG00000016030	gnl3	99	45.520	ENSANAG00000033209	GNL3	99	45.471	Aotus_nancymaae
ENSORLG00000016030	gnl3	100	67.712	ENSACLG00000007381	gnl3	100	68.624	Astatotilapia_calliptera
ENSORLG00000016030	gnl3	99	52.373	ENSAMXG00000020880	gnl3	99	54.255	Astyanax_mexicanus
ENSORLG00000016030	gnl3	87	49.266	ENSBTAG00000014549	GNL3	99	44.544	Bos_taurus
ENSORLG00000016030	gnl3	99	45.601	ENSCJAG00000006864	-	99	45.917	Callithrix_jacchus
ENSORLG00000016030	gnl3	99	45.601	ENSCJAG00000044256	-	99	45.917	Callithrix_jacchus
ENSORLG00000016030	gnl3	88	46.735	ENSCAFG00000009004	GNL3	99	43.190	Canis_familiaris
ENSORLG00000016030	gnl3	88	46.939	ENSCAFG00020002613	GNL3	95	45.187	Canis_lupus_dingo
ENSORLG00000016030	gnl3	99	45.179	ENSCHIG00000022181	GNL3	99	44.821	Capra_hircus
ENSORLG00000016030	gnl3	99	44.964	ENSTSYG00000006851	GNL3	99	44.604	Carlito_syrichta
ENSORLG00000016030	gnl3	87	47.881	ENSCPOG00000000282	GNL3	87	47.881	Cavia_porcellus
ENSORLG00000016030	gnl3	99	44.165	ENSCCAG00000033281	GNL3	99	44.102	Cebus_capucinus
ENSORLG00000016030	gnl3	99	45.583	ENSCATG00000040886	GNL3	99	45.664	Cercocebus_atys
ENSORLG00000016030	gnl3	99	44.324	ENSCLAG00000010109	-	99	44.865	Chinchilla_lanigera
ENSORLG00000016030	gnl3	99	45.583	ENSCSAG00000013315	GNL3	99	45.841	Chlorocebus_sabaeus
ENSORLG00000016030	gnl3	94	45.124	ENSCHOG00000002726	GNL3	91	45.298	Choloepus_hoffmanni
ENSORLG00000016030	gnl3	76	46.697	ENSCPBG00000018330	-	96	47.032	Chrysemys_picta_bellii
ENSORLG00000016030	gnl3	98	44.065	ENSCANG00000039969	GNL3	99	44.324	Colobus_angolensis_palliatus
ENSORLG00000016030	gnl3	99	44.627	ENSCGRG00001020950	Gnl3	99	44.828	Cricetulus_griseus_chok1gshd
ENSORLG00000016030	gnl3	99	44.627	ENSCGRG00000015225	Gnl3	99	44.828	Cricetulus_griseus_crigri
ENSORLG00000016030	gnl3	99	66.120	ENSCSEG00000005009	gnl3	100	64.845	Cynoglossus_semilaevis
ENSORLG00000016030	gnl3	100	66.184	ENSCVAG00000010679	gnl3	100	66.062	Cyprinodon_variegatus
ENSORLG00000016030	gnl3	99	54.513	ENSDARG00000006219	gnl3	99	55.752	Danio_rerio
ENSORLG00000016030	gnl3	99	44.207	ENSDNOG00000001037	GNL3	99	43.850	Dasypus_novemcinctus
ENSORLG00000016030	gnl3	99	45.109	ENSDORG00000000674	Gnl3	99	45.109	Dipodomys_ordii
ENSORLG00000016030	gnl3	80	78.873	ENSETEG00000016534	-	79	78.873	Echinops_telfairi
ENSORLG00000016030	gnl3	99	45.081	ENSEASG00005014636	GNL3	99	44.669	Equus_asinus_asinus
ENSORLG00000016030	gnl3	99	45.230	ENSECAG00000014850	GNL3	99	44.365	Equus_caballus
ENSORLG00000016030	gnl3	99	43.580	ENSEEUG00000004427	GNL3	99	43.761	Erinaceus_europaeus
ENSORLG00000016030	gnl3	100	62.500	ENSELUG00000008767	gnl3	100	62.254	Esox_lucius
ENSORLG00000016030	gnl3	99	44.128	ENSFCAG00000015719	GNL3	99	43.494	Felis_catus
ENSORLG00000016030	gnl3	99	48.457	ENSFALG00000008957	GNL3	99	48.276	Ficedula_albicollis
ENSORLG00000016030	gnl3	99	43.038	ENSFDAG00000020679	GNL3	99	42.934	Fukomys_damarensis
ENSORLG00000016030	gnl3	100	67.332	ENSFHEG00000020897	gnl3	100	67.332	Fundulus_heteroclitus
ENSORLG00000016030	gnl3	99	59.397	ENSGMOG00000001745	gnl3	100	58.511	Gadus_morhua
ENSORLG00000016030	gnl3	99	46.127	ENSGALG00000001613	GNL3	99	46.713	Gallus_gallus
ENSORLG00000016030	gnl3	99	56.111	ENSGAFG00000007184	gnl3	99	56.111	Gambusia_affinis
ENSORLG00000016030	gnl3	99	65.405	ENSGACG00000000309	gnl3	99	66.607	Gasterosteus_aculeatus
ENSORLG00000016030	gnl3	79	46.444	ENSGAGG00000021579	-	99	47.461	Gopherus_agassizii
ENSORLG00000016030	gnl3	99	45.263	ENSGGOG00000011444	GNL3	99	45.213	Gorilla_gorilla
ENSORLG00000016030	gnl3	100	69.910	ENSHBUG00000001340	gnl3	100	70.991	Haplochromis_burtoni
ENSORLG00000016030	gnl3	99	43.907	ENSHGLG00000018299	GNL3	99	43.750	Heterocephalus_glaber_female
ENSORLG00000016030	gnl3	99	59.420	ENSHCOG00000009446	gnl3	99	61.191	Hippocampus_comes
ENSORLG00000016030	gnl3	87	57.203	ENSIPUG00000023677	gnl3	99	51.737	Ictalurus_punctatus
ENSORLG00000016030	gnl3	99	45.063	ENSSTOG00000000356	GNL3	99	44.938	Ictidomys_tridecemlineatus
ENSORLG00000016030	gnl3	99	46.293	ENSJJAG00000021993	Gnl3	100	45.781	Jaculus_jaculus
ENSORLG00000016030	gnl3	100	68.670	ENSKMAG00000005965	gnl3	100	69.455	Kryptolebias_marmoratus
ENSORLG00000016030	gnl3	100	69.328	ENSLBEG00000011394	gnl3	100	69.328	Labrus_bergylta
ENSORLG00000016030	gnl3	87	55.063	ENSLACG00000001259	GNL3	99	49.123	Latimeria_chalumnae
ENSORLG00000016030	gnl3	99	54.674	ENSLOCG00000010542	gnl3	99	55.556	Lepisosteus_oculatus
ENSORLG00000016030	gnl3	99	42.755	ENSLAFG00000016056	GNL3	99	42.934	Loxodonta_africana
ENSORLG00000016030	gnl3	99	45.213	ENSMFAG00000000613	GNL3	99	46.018	Macaca_fascicularis
ENSORLG00000016030	gnl3	98	43.841	ENSMMUG00000012511	GNL3	99	44.665	Macaca_mulatta
ENSORLG00000016030	gnl3	98	44.022	ENSMNEG00000041979	GNL3	99	44.846	Macaca_nemestrina
ENSORLG00000016030	gnl3	99	45.936	ENSMLEG00000027696	GNL3	99	46.018	Mandrillus_leucophaeus
ENSORLG00000016030	gnl3	100	73.105	ENSMAMG00000008904	gnl3	100	73.105	Mastacembelus_armatus
ENSORLG00000016030	gnl3	100	70.270	ENSMZEG00005014857	gnl3	100	70.811	Maylandia_zebra
ENSORLG00000016030	gnl3	87	66.525	ENSMZEG00005014957	-	98	65.331	Maylandia_zebra
ENSORLG00000016030	gnl3	95	39.123	ENSMGAG00000000848	GNL3	99	39.292	Meleagris_gallopavo
ENSORLG00000016030	gnl3	99	43.885	ENSMAUG00000020178	Gnl3	99	43.447	Mesocricetus_auratus
ENSORLG00000016030	gnl3	99	43.838	ENSMICG00000016373	GNL3	99	43.286	Microcebus_murinus
ENSORLG00000016030	gnl3	99	43.818	ENSMOCG00000018437	Gnl3	99	42.805	Microtus_ochrogaster
ENSORLG00000016030	gnl3	99	66.728	ENSMMOG00000002815	gnl3	92	73.987	Mola_mola
ENSORLG00000016030	gnl3	88	50.000	ENSMODG00000011257	GNL3	99	45.406	Monodelphis_domestica
ENSORLG00000016030	gnl3	91	72.837	ENSMALG00000021043	gnl3	99	72.636	Monopterus_albus
ENSORLG00000016030	gnl3	99	44.646	MGP_CAROLIEiJ_G0019063	Gnl3	100	45.833	Mus_caroli
ENSORLG00000016030	gnl3	99	45.208	ENSMUSG00000042354	Gnl3	100	55.102	Mus_musculus
ENSORLG00000016030	gnl3	99	45.617	MGP_PahariEiJ_G0030080	Gnl3	99	45.045	Mus_pahari
ENSORLG00000016030	gnl3	99	45.570	MGP_SPRETEiJ_G0019948	Gnl3	99	45.570	Mus_spretus
ENSORLG00000016030	gnl3	99	43.158	ENSMPUG00000016777	GNL3	99	43.594	Mustela_putorius_furo
ENSORLG00000016030	gnl3	99	45.735	ENSMLUG00000000728	GNL3	99	45.055	Myotis_lucifugus
ENSORLG00000016030	gnl3	99	43.627	ENSNGAG00000017202	Gnl3	99	43.393	Nannospalax_galili
ENSORLG00000016030	gnl3	87	69.831	ENSNBRG00000013161	gnl3	100	68.410	Neolamprologus_brichardi
ENSORLG00000016030	gnl3	99	45.745	ENSNLEG00000007173	GNL3	99	45.699	Nomascus_leucogenys
ENSORLG00000016030	gnl3	62	45.104	ENSMEUG00000011502	-	87	40.876	Notamacropus_eugenii
ENSORLG00000016030	gnl3	77	41.452	ENSOPRG00000009356	GNL3	96	41.452	Ochotona_princeps
ENSORLG00000016030	gnl3	99	44.404	ENSODEG00000009492	GNL3	99	44.404	Octodon_degus
ENSORLG00000016030	gnl3	100	70.863	ENSONIG00000019335	gnl3	100	71.043	Oreochromis_niloticus
ENSORLG00000016030	gnl3	99	46.964	ENSOANG00000013437	GNL3	99	46.786	Ornithorhynchus_anatinus
ENSORLG00000016030	gnl3	99	44.964	ENSOCUG00000009841	GNL3	99	44.602	Oryctolagus_cuniculus
ENSORLG00000016030	gnl3	100	98.336	ENSORLG00020014358	gnl3	100	98.336	Oryzias_latipes_hni
ENSORLG00000016030	gnl3	100	99.261	ENSORLG00015009489	gnl3	100	99.261	Oryzias_latipes_hsok
ENSORLG00000016030	gnl3	100	86.372	ENSOMEG00000005462	gnl3	100	86.372	Oryzias_melastigma
ENSORLG00000016030	gnl3	99	44.190	ENSOGAG00000004101	GNL3	99	44.029	Otolemur_garnettii
ENSORLG00000016030	gnl3	99	44.779	ENSOARG00000002470	GNL3	99	44.602	Ovis_aries
ENSORLG00000016030	gnl3	99	45.614	ENSPPAG00000019253	GNL3	99	45.567	Pan_paniscus
ENSORLG00000016030	gnl3	99	44.464	ENSPPRG00000009550	GNL3	99	43.828	Panthera_pardus
ENSORLG00000016030	gnl3	99	44.286	ENSPTIG00000009356	GNL3	99	43.649	Panthera_tigris_altaica
ENSORLG00000016030	gnl3	99	45.614	ENSPTRG00000015009	GNL3	99	45.567	Pan_troglodytes
ENSORLG00000016030	gnl3	99	43.262	ENSPANG00000016579	GNL3	99	44.071	Papio_anubis
ENSORLG00000016030	gnl3	100	58.559	ENSPKIG00000024295	gnl3	100	59.353	Paramormyrops_kingsleyae
ENSORLG00000016030	gnl3	98	48.468	ENSPSIG00000011486	GNL3	99	49.013	Pelodiscus_sinensis
ENSORLG00000016030	gnl3	99	64.154	ENSPMGG00000008210	gnl3	99	64.234	Periophthalmus_magnuspinnatus
ENSORLG00000016030	gnl3	99	43.486	ENSPEMG00000017577	Gnl3	99	44.139	Peromyscus_maniculatus_bairdii
ENSORLG00000016030	gnl3	87	49.788	ENSPCIG00000018642	GNL3	98	44.207	Phascolarctos_cinereus
ENSORLG00000016030	gnl3	100	63.834	ENSPFOG00000017601	gnl3	96	68.992	Poecilia_formosa
ENSORLG00000016030	gnl3	100	67.514	ENSPLAG00000016968	gnl3	100	67.151	Poecilia_latipinna
ENSORLG00000016030	gnl3	99	64.945	ENSPMEG00000018775	gnl3	99	64.576	Poecilia_mexicana
ENSORLG00000016030	gnl3	99	63.704	ENSPREG00000002909	gnl3	99	61.439	Poecilia_reticulata
ENSORLG00000016030	gnl3	99	45.213	ENSPPYG00000013800	GNL3	99	45.213	Pongo_abelii
ENSORLG00000016030	gnl3	82	47.124	ENSPCAG00000002006	GNL3	81	46.137	Procavia_capensis
ENSORLG00000016030	gnl3	99	45.133	ENSPCOG00000026637	GNL3	99	45.179	Propithecus_coquereli
ENSORLG00000016030	gnl3	99	45.179	ENSPVAG00000012586	GNL3	99	44.821	Pteropus_vampyrus
ENSORLG00000016030	gnl3	91	63.405	ENSPNYG00000005130	gnl3	99	62.035	Pundamilia_nyererei
ENSORLG00000016030	gnl3	99	51.590	ENSPNAG00000013096	gnl3	99	52.641	Pygocentrus_nattereri
ENSORLG00000016030	gnl3	99	43.243	ENSRNOG00000028461	Gnl3	99	44.265	Rattus_norvegicus
ENSORLG00000016030	gnl3	99	44.858	ENSRBIG00000031778	GNL3	99	45.841	Rhinopithecus_bieti
ENSORLG00000016030	gnl3	99	44.858	ENSRROG00000030086	GNL3	99	45.841	Rhinopithecus_roxellana
ENSORLG00000016030	gnl3	99	44.484	ENSSBOG00000019990	GNL3	99	44.268	Saimiri_boliviensis_boliviensis
ENSORLG00000016030	gnl3	86	48.608	ENSSHAG00000006141	GNL3	99	44.685	Sarcophilus_harrisii
ENSORLG00000016030	gnl3	100	57.581	ENSSFOG00015021228	gnl3	100	58.770	Scleropages_formosus
ENSORLG00000016030	gnl3	100	72.000	ENSSMAG00000006662	gnl3	100	70.909	Scophthalmus_maximus
ENSORLG00000016030	gnl3	100	73.056	ENSSDUG00000000972	gnl3	100	72.875	Seriola_dumerili
ENSORLG00000016030	gnl3	100	73.333	ENSSLDG00000008692	gnl3	92	73.153	Seriola_lalandi_dorsalis
ENSORLG00000016030	gnl3	90	44.848	ENSSARG00000002226	GNL3	93	44.618	Sorex_araneus
ENSORLG00000016030	gnl3	99	47.038	ENSSPUG00000003582	GNL3	99	48.070	Sphenodon_punctatus
ENSORLG00000016030	gnl3	100	73.022	ENSSPAG00000020180	gnl3	100	72.482	Stegastes_partitus
ENSORLG00000016030	gnl3	99	43.772	ENSSSCG00000011449	GNL3	99	44.170	Sus_scrofa
ENSORLG00000016030	gnl3	86	52.442	ENSTGUG00000005774	GNL3	99	47.535	Taeniopygia_guttata
ENSORLG00000016030	gnl3	100	61.191	ENSTRUG00000005552	gnl3	100	62.094	Takifugu_rubripes
ENSORLG00000016030	gnl3	100	63.273	ENSTNIG00000007263	gnl3	100	62.909	Tetraodon_nigroviridis
ENSORLG00000016030	gnl3	97	41.788	ENSTBEG00000017518	GNL3	99	42.463	Tupaia_belangeri
ENSORLG00000016030	gnl3	99	43.557	ENSUAMG00000012347	GNL3	99	43.169	Ursus_americanus
ENSORLG00000016030	gnl3	99	42.883	ENSUMAG00000021001	GNL3	99	42.500	Ursus_maritimus
ENSORLG00000016030	gnl3	99	43.066	ENSVVUG00000024536	-	99	42.910	Vulpes_vulpes
ENSORLG00000016030	gnl3	99	53.631	ENSXCOG00000018425	gnl3	95	69.488	Xiphophorus_couchianus
ENSORLG00000016030	gnl3	100	65.517	ENSXMAG00000022565	gnl3	100	65.154	Xiphophorus_maculatus