EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000016114 (Gene tree)
Gene ID: 101165119
Gene Symbol: hnrnpub
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 9864 bases
Position: chr24:13238161-13248024
Accession: 101165119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000020164	SAP	PF02037.27	3.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000020165	-	4526	XM_011491757	ENSORLP00000020164	801 (aa)	XP_011490059	H2MN64

Gene Model

Click here to download ENSORLG00000016114's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000016114's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000016114	hnrnpub	76	33.762	ENSORLG00000024574	si:ch211-107m4.1	70	36.726
ENSORLG00000016114	hnrnpub	54	51.606	ENSORLG00000001002	HNRNPUL1	63	46.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000016114	hnrnpub	86	83.333	ENSG00000153187	HNRNPU	99	65.667	Homo_sapiens
ENSORLG00000016114	hnrnpub	100	83.519	ENSAPOG00000017400	hnrnpub	100	82.156	Acanthochromis_polyacanthus
ENSORLG00000016114	hnrnpub	100	76.810	ENSACIG00000012138	hnrnpub	100	82.361	Amphilophus_citrinellus
ENSORLG00000016114	hnrnpub	100	84.988	ENSAOCG00000015843	hnrnpub	100	82.506	Amphiprion_ocellaris
ENSORLG00000016114	hnrnpub	100	84.988	ENSAPEG00000014679	hnrnpub	100	82.506	Amphiprion_percula
ENSORLG00000016114	hnrnpub	98	85.535	ENSATEG00000016178	hnrnpub	97	85.535	Anabas_testudineus
ENSORLG00000016114	hnrnpub	88	68.750	ENSACAG00000004511	HNRNPU	78	68.750	Anolis_carolinensis
ENSORLG00000016114	hnrnpub	99	50.000	ENSANAG00000033895	-	98	56.498	Aotus_nancymaae
ENSORLG00000016114	hnrnpub	100	82.447	ENSACLG00000008165	hnrnpub	100	82.077	Astatotilapia_calliptera
ENSORLG00000016114	hnrnpub	78	55.063	ENSBTAG00000007606	HNRNPU	79	78.261	Bos_taurus
ENSORLG00000016114	hnrnpub	86	83.333	ENSCJAG00000016914	HNRNPU	79	78.261	Callithrix_jacchus
ENSORLG00000016114	hnrnpub	78	57.211	ENSCAFG00020000918	HNRNPU	75	57.910	Canis_lupus_dingo
ENSORLG00000016114	hnrnpub	79	56.782	ENSCHIG00000004900	HNRNPU	75	57.910	Capra_hircus
ENSORLG00000016114	hnrnpub	86	83.333	ENSCCAG00000037859	-	79	78.261	Cebus_capucinus
ENSORLG00000016114	hnrnpub	86	83.333	ENSCATG00000035273	HNRNPU	79	78.261	Cercocebus_atys
ENSORLG00000016114	hnrnpub	80	54.805	ENSCSAG00000009219	HNRNPU	75	56.587	Chlorocebus_sabaeus
ENSORLG00000016114	hnrnpub	86	83.333	ENSCHOG00000001387	HNRNPU	76	78.261	Choloepus_hoffmanni
ENSORLG00000016114	hnrnpub	97	56.372	ENSCPBG00000009415	HNRNPU	79	68.966	Chrysemys_picta_bellii
ENSORLG00000016114	hnrnpub	86	83.333	ENSCANG00000022780	HNRNPU	77	78.261	Colobus_angolensis_palliatus
ENSORLG00000016114	hnrnpub	100	75.718	ENSCSEG00000010804	hnrnpub	100	77.844	Cynoglossus_semilaevis
ENSORLG00000016114	hnrnpub	88	76.786	ENSCVAG00000004280	hnrnpub	100	73.002	Cyprinodon_variegatus
ENSORLG00000016114	hnrnpub	100	62.214	ENSDARG00000004735	hnrnpub	100	60.166	Danio_rerio
ENSORLG00000016114	hnrnpub	100	59.805	ENSDARG00000015206	hnrnpua	100	59.453	Danio_rerio
ENSORLG00000016114	hnrnpub	99	50.361	ENSDNOG00000000215	HNRNPU	86	83.333	Dasypus_novemcinctus
ENSORLG00000016114	hnrnpub	100	57.426	ENSELUG00000011966	hnrnpua	100	56.858	Esox_lucius
ENSORLG00000016114	hnrnpub	100	70.000	ENSELUG00000010733	hnrnpub	100	71.513	Esox_lucius
ENSORLG00000016114	hnrnpub	80	54.723	ENSFCAG00000002156	HNRNPU	74	57.612	Felis_catus
ENSORLG00000016114	hnrnpub	100	81.752	ENSFHEG00000022639	hnrnpub	100	82.603	Fundulus_heteroclitus
ENSORLG00000016114	hnrnpub	100	69.748	ENSGMOG00000001755	hnrnpub	99	70.192	Gadus_morhua
ENSORLG00000016114	hnrnpub	87	71.930	ENSGALG00000010671	HNRNPU	78	71.930	Gallus_gallus
ENSORLG00000016114	hnrnpub	100	80.072	ENSGAFG00000009369	hnrnpub	100	80.072	Gambusia_affinis
ENSORLG00000016114	hnrnpub	100	72.486	ENSGACG00000004679	hnrnpub	99	72.601	Gasterosteus_aculeatus
ENSORLG00000016114	hnrnpub	86	83.333	ENSGGOG00000004061	HNRNPU	79	78.261	Gorilla_gorilla
ENSORLG00000016114	hnrnpub	100	82.571	ENSHBUG00000012290	hnrnpub	100	82.077	Haplochromis_burtoni
ENSORLG00000016114	hnrnpub	85	79.330	ENSHCOG00000020091	hnrnpub	100	73.709	Hippocampus_comes
ENSORLG00000016114	hnrnpub	78	89.362	ENSIPUG00000007749	hnrnpu	92	79.661	Ictalurus_punctatus
ENSORLG00000016114	hnrnpub	100	80.220	ENSKMAG00000004532	hnrnpub	100	81.197	Kryptolebias_marmoratus
ENSORLG00000016114	hnrnpub	85	86.502	ENSLBEG00000022520	hnrnpub	100	81.785	Labrus_bergylta
ENSORLG00000016114	hnrnpub	89	91.489	ENSLOCG00000016652	hnrnpua	79	78.947	Lepisosteus_oculatus
ENSORLG00000016114	hnrnpub	86	83.333	ENSMFAG00000037308	HNRNPU	79	78.261	Macaca_fascicularis
ENSORLG00000016114	hnrnpub	80	55.267	ENSMMUG00000021098	HNRNPU	75	56.587	Macaca_mulatta
ENSORLG00000016114	hnrnpub	86	83.333	ENSMNEG00000043645	HNRNPU	79	78.261	Macaca_nemestrina
ENSORLG00000016114	hnrnpub	100	86.973	ENSMAMG00000007196	hnrnpub	100	86.725	Mastacembelus_armatus
ENSORLG00000016114	hnrnpub	100	82.447	ENSMZEG00005003185	hnrnpub	100	82.077	Maylandia_zebra
ENSORLG00000016114	hnrnpub	79	52.119	ENSMICG00000004616	HNRNPU	79	78.261	Microcebus_murinus
ENSORLG00000016114	hnrnpub	96	84.536	ENSMALG00000018243	hnrnpub	99	84.278	Monopterus_albus
ENSORLG00000016114	hnrnpub	87	80.952	ENSMLUG00000000475	HNRNPU	80	76.087	Myotis_lucifugus
ENSORLG00000016114	hnrnpub	99	49.376	ENSNGAG00000019075	Hnrnpu	81	83.721	Nannospalax_galili
ENSORLG00000016114	hnrnpub	100	82.447	ENSNBRG00000017855	hnrnpub	100	82.077	Neolamprologus_brichardi
ENSORLG00000016114	hnrnpub	81	67.273	ENSMEUG00000000541	HNRNPU	77	78.261	Notamacropus_eugenii
ENSORLG00000016114	hnrnpub	100	82.170	ENSONIG00000001260	hnrnpub	100	81.671	Oreochromis_niloticus
ENSORLG00000016114	hnrnpub	84	83.333	ENSOCUG00000014469	HNRNPU	70	83.333	Oryctolagus_cuniculus
ENSORLG00000016114	hnrnpub	100	99.501	ENSORLG00020005363	hnrnpub	100	99.501	Oryzias_latipes_hni
ENSORLG00000016114	hnrnpub	100	99.252	ENSORLG00015001190	hnrnpub	100	99.252	Oryzias_latipes_hsok
ENSORLG00000016114	hnrnpub	100	92.768	ENSOMEG00000014951	hnrnpub	100	92.519	Oryzias_melastigma
ENSORLG00000016114	hnrnpub	86	83.333	ENSPPAG00000038652	HNRNPU	79	78.261	Pan_paniscus
ENSORLG00000016114	hnrnpub	88	83.333	ENSPPRG00000002662	HNRNPU	78	78.261	Panthera_pardus
ENSORLG00000016114	hnrnpub	86	83.333	ENSPTRG00000002182	HNRNPU	79	78.261	Pan_troglodytes
ENSORLG00000016114	hnrnpub	80	55.267	ENSPANG00000011643	HNRNPU	98	56.498	Papio_anubis
ENSORLG00000016114	hnrnpub	100	65.223	ENSPKIG00000006885	hnrnpua	81	69.912	Paramormyrops_kingsleyae
ENSORLG00000016114	hnrnpub	100	66.667	ENSPKIG00000022332	hnrnpub	100	66.265	Paramormyrops_kingsleyae
ENSORLG00000016114	hnrnpub	84	78.261	ENSPCIG00000008657	HNRNPU	77	78.261	Phascolarctos_cinereus
ENSORLG00000016114	hnrnpub	100	81.395	ENSPFOG00000002908	hnrnpub	100	81.273	Poecilia_formosa
ENSORLG00000016114	hnrnpub	100	81.863	ENSPLAG00000004160	hnrnpub	100	81.373	Poecilia_latipinna
ENSORLG00000016114	hnrnpub	80	54.863	ENSPCOG00000003883	-	77	55.821	Propithecus_coquereli
ENSORLG00000016114	hnrnpub	86	83.333	ENSPVAG00000002581	HNRNPU	79	78.261	Pteropus_vampyrus
ENSORLG00000016114	hnrnpub	100	82.695	ENSPNYG00000021642	hnrnpub	100	82.324	Pundamilia_nyererei
ENSORLG00000016114	hnrnpub	100	66.546	ENSPNAG00000001055	hnrnpub	100	64.192	Pygocentrus_nattereri
ENSORLG00000016114	hnrnpub	80	54.656	ENSRBIG00000031519	HNRNPU	98	55.951	Rhinopithecus_bieti
ENSORLG00000016114	hnrnpub	83	53.924	ENSRROG00000041642	HNRNPU	98	56.327	Rhinopithecus_roxellana
ENSORLG00000016114	hnrnpub	100	65.269	ENSSFOG00015019004	hnrnpu	100	63.377	Scleropages_formosus
ENSORLG00000016114	hnrnpub	100	66.466	ENSSFOG00015001124	hnrnpub	100	65.144	Scleropages_formosus
ENSORLG00000016114	hnrnpub	85	86.792	ENSSMAG00000003607	hnrnpub	100	79.429	Scophthalmus_maximus
ENSORLG00000016114	hnrnpub	100	85.294	ENSSDUG00000005912	hnrnpub	100	84.804	Seriola_dumerili
ENSORLG00000016114	hnrnpub	100	84.982	ENSSLDG00000004899	hnrnpub	100	85.714	Seriola_lalandi_dorsalis
ENSORLG00000016114	hnrnpub	88	82.927	ENSSPUG00000011393	HNRNPU	81	65.625	Sphenodon_punctatus
ENSORLG00000016114	hnrnpub	100	83.995	ENSSPAG00000011853	hnrnpub	100	84.119	Stegastes_partitus
ENSORLG00000016114	hnrnpub	78	56.894	ENSSSCG00000010877	HNRNPU	79	78.261	Sus_scrofa
ENSORLG00000016114	hnrnpub	100	77.616	ENSTRUG00000007759	hnrnpub	100	78.224	Takifugu_rubripes
ENSORLG00000016114	hnrnpub	100	73.203	ENSTNIG00000009725	hnrnpub	100	73.934	Tetraodon_nigroviridis
ENSORLG00000016114	hnrnpub	78	57.211	ENSVVUG00000026524	HNRNPU	75	57.910	Vulpes_vulpes
ENSORLG00000016114	hnrnpub	99	49.304	ENSXETG00000011386	hnrnpu	99	49.594	Xenopus_tropicalis
ENSORLG00000016114	hnrnpub	100	81.074	ENSXMAG00000010356	hnrnpub	100	80.952	Xiphophorus_maculatus