EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000016130 (Gene tree)
Gene ID: 101163978
Gene Symbol: sall4
Alias: -
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 5065 bases
Position: chr7:25040036-25045100
Accession: 101163978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000020188	zf-C2H2	PF00096.26	5.6e-30	1	6
ENSORLP00000020188	zf-C2H2	PF00096.26	5.6e-30	2	6
ENSORLP00000020188	zf-C2H2	PF00096.26	5.6e-30	3	6
ENSORLP00000020188	zf-C2H2	PF00096.26	5.6e-30	4	6
ENSORLP00000020188	zf-C2H2	PF00096.26	5.6e-30	5	6
ENSORLP00000020188	zf-C2H2	PF00096.26	5.6e-30	6	6
ENSORLP00000020188	zf-met	PF12874.7	1.5e-15	1	2
ENSORLP00000020188	zf-met	PF12874.7	1.5e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000020189	-	3180	XM_004070999	ENSORLP00000020188	1059 (aa)	XP_004071047	H2MN87

Gene Model

Click here to download ENSORLG00000016130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000016130's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000016130	sall4	54	51.020	ENSORLG00000024652	-	98	51.020
ENSORLG00000016130	sall4	99	65.385	ENSORLG00000013827	sall1a	99	65.385
ENSORLG00000016130	sall4	66	50.000	ENSORLG00000002268	-	88	50.000
ENSORLG00000016130	sall4	54	44.444	ENSORLG00000026463	-	65	40.000
ENSORLG00000016130	sall4	86	74.757	ENSORLG00000020718	sall3a	88	65.385
ENSORLG00000016130	sall4	65	60.000	ENSORLG00000007097	-	95	60.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000016130	sall4	100	43.700	ENSG00000101115	SALL4	100	53.333	Homo_sapiens
ENSORLG00000016130	sall4	100	77.737	ENSAPOG00000002465	sall4	100	77.093	Acanthochromis_polyacanthus
ENSORLG00000016130	sall4	100	44.683	ENSAMEG00000013250	-	99	45.931	Ailuropoda_melanoleuca
ENSORLG00000016130	sall4	100	75.253	ENSACIG00000017298	sall4	100	74.609	Amphilophus_citrinellus
ENSORLG00000016130	sall4	100	78.381	ENSAOCG00000023678	sall4	100	77.921	Amphiprion_ocellaris
ENSORLG00000016130	sall4	100	78.565	ENSAPEG00000000751	sall4	100	78.105	Amphiprion_percula
ENSORLG00000016130	sall4	100	77.615	ENSATEG00000024480	sall4	100	76.881	Anabas_testudineus
ENSORLG00000016130	sall4	99	50.222	ENSAPLG00000006498	SALL4	100	50.439	Anas_platyrhynchos
ENSORLG00000016130	sall4	100	49.781	ENSACAG00000012748	SALL4	100	50.219	Anolis_carolinensis
ENSORLG00000016130	sall4	100	43.822	ENSANAG00000023352	SALL4	100	43.822	Aotus_nancymaae
ENSORLG00000016130	sall4	100	75.230	ENSACLG00000017851	sall4	100	74.770	Astatotilapia_calliptera
ENSORLG00000016130	sall4	99	64.126	ENSAMXG00000001254	sall4	99	64.651	Astyanax_mexicanus
ENSORLG00000016130	sall4	100	43.082	ENSBTAG00000003101	SALL4	100	43.345	Bos_taurus
ENSORLG00000016130	sall4	80	46.093	ENSCJAG00000000591	SALL4	97	46.206	Callithrix_jacchus
ENSORLG00000016130	sall4	100	45.027	ENSCAFG00000011738	-	100	45.049	Canis_familiaris
ENSORLG00000016130	sall4	100	45.027	ENSCAFG00020021870	SALL4	100	45.049	Canis_lupus_dingo
ENSORLG00000016130	sall4	100	43.007	ENSCHIG00000026270	SALL4	100	43.018	Capra_hircus
ENSORLG00000016130	sall4	100	43.443	ENSTSYG00000007359	SALL4	100	51.667	Carlito_syrichta
ENSORLG00000016130	sall4	99	43.231	ENSCAPG00000012135	SALL4	98	43.643	Cavia_aperea
ENSORLG00000016130	sall4	100	40.714	ENSCCAG00000029512	-	100	60.784	Cebus_capucinus
ENSORLG00000016130	sall4	100	43.805	ENSCATG00000030757	SALL4	100	43.628	Cercocebus_atys
ENSORLG00000016130	sall4	100	43.972	ENSCLAG00000010479	SALL4	100	43.608	Chinchilla_lanigera
ENSORLG00000016130	sall4	100	43.717	ENSCSAG00000015269	SALL4	100	43.257	Chlorocebus_sabaeus
ENSORLG00000016130	sall4	99	49.823	ENSCPBG00000014995	SALL4	99	50.694	Chrysemys_picta_bellii
ENSORLG00000016130	sall4	100	43.805	ENSCANG00000036463	SALL4	100	43.628	Colobus_angolensis_palliatus
ENSORLG00000016130	sall4	100	42.035	ENSCGRG00001019569	Sall4	100	53.604	Cricetulus_griseus_chok1gshd
ENSORLG00000016130	sall4	100	41.904	ENSCGRG00000000462	Sall4	99	79.012	Cricetulus_griseus_crigri
ENSORLG00000016130	sall4	100	75.663	ENSCSEG00000014604	sall4	100	75.297	Cynoglossus_semilaevis
ENSORLG00000016130	sall4	100	77.079	ENSCVAG00000010815	sall4	100	77.079	Cyprinodon_variegatus
ENSORLG00000016130	sall4	99	62.973	ENSDARG00000044485	sall4	99	62.703	Danio_rerio
ENSORLG00000016130	sall4	100	44.474	ENSDNOG00000040633	SALL4	100	44.610	Dasypus_novemcinctus
ENSORLG00000016130	sall4	100	41.808	ENSDORG00000012841	Sall4	100	77.027	Dipodomys_ordii
ENSORLG00000016130	sall4	67	46.552	ENSETEG00000012475	-	58	55.556	Echinops_telfairi
ENSORLG00000016130	sall4	100	44.248	ENSECAG00000018533	SALL4	100	44.277	Equus_caballus
ENSORLG00000016130	sall4	100	43.482	ENSEEUG00000003649	SALL4	99	42.321	Erinaceus_europaeus
ENSORLG00000016130	sall4	100	64.393	ENSELUG00000005696	sall4	100	64.286	Esox_lucius
ENSORLG00000016130	sall4	100	44.172	ENSFCAG00000002822	SALL4	100	43.990	Felis_catus
ENSORLG00000016130	sall4	100	49.911	ENSFALG00000013149	SALL4	100	50.707	Ficedula_albicollis
ENSORLG00000016130	sall4	100	42.128	ENSFDAG00000017812	SALL4	100	42.630	Fukomys_damarensis
ENSORLG00000016130	sall4	100	75.783	ENSFHEG00000014187	sall4	100	75.783	Fundulus_heteroclitus
ENSORLG00000016130	sall4	100	68.744	ENSGMOG00000003822	sall4	100	69.231	Gadus_morhua
ENSORLG00000016130	sall4	100	51.019	ENSGALG00000041365	SALL4	100	51.418	Gallus_gallus
ENSORLG00000016130	sall4	100	76.824	ENSGAFG00000019925	sall4	100	76.824	Gambusia_affinis
ENSORLG00000016130	sall4	100	71.168	ENSGACG00000011124	sall4	100	70.712	Gasterosteus_aculeatus
ENSORLG00000016130	sall4	99	50.352	ENSGAGG00000002297	SALL4	99	51.068	Gopherus_agassizii
ENSORLG00000016130	sall4	100	43.567	ENSGGOG00000001832	SALL4	100	43.501	Gorilla_gorilla
ENSORLG00000016130	sall4	100	75.322	ENSHBUG00000007327	sall4	100	74.862	Haplochromis_burtoni
ENSORLG00000016130	sall4	98	43.535	ENSHGLG00000009043	SALL4	96	43.535	Heterocephalus_glaber_female
ENSORLG00000016130	sall4	98	43.535	ENSHGLG00100002722	SALL4	96	43.535	Heterocephalus_glaber_male
ENSORLG00000016130	sall4	100	73.095	ENSHCOG00000008519	sall4	100	72.544	Hippocampus_comes
ENSORLG00000016130	sall4	99	62.613	ENSIPUG00000019170	sall4	99	62.613	Ictalurus_punctatus
ENSORLG00000016130	sall4	63	54.146	ENSSTOG00000025002	SALL4	99	84.507	Ictidomys_tridecemlineatus
ENSORLG00000016130	sall4	100	43.172	ENSJJAG00000020688	Sall4	99	85.915	Jaculus_jaculus
ENSORLG00000016130	sall4	100	79.244	ENSKMAG00000002501	sall4	100	79.244	Kryptolebias_marmoratus
ENSORLG00000016130	sall4	100	74.634	ENSLBEG00000019951	sall4	100	73.810	Labrus_bergylta
ENSORLG00000016130	sall4	96	47.212	ENSLACG00000013898	SALL4	99	63.158	Latimeria_chalumnae
ENSORLG00000016130	sall4	100	61.818	ENSLOCG00000002427	sall4	100	62.060	Lepisosteus_oculatus
ENSORLG00000016130	sall4	100	44.337	ENSLAFG00000004309	SALL4	100	44.162	Loxodonta_africana
ENSORLG00000016130	sall4	100	43.717	ENSMFAG00000027169	SALL4	100	43.805	Macaca_fascicularis
ENSORLG00000016130	sall4	86	45.551	ENSMMUG00000003870	SALL4	100	55.665	Macaca_mulatta
ENSORLG00000016130	sall4	86	45.551	ENSMNEG00000035995	SALL4	71	67.308	Macaca_nemestrina
ENSORLG00000016130	sall4	100	43.805	ENSMLEG00000030467	SALL4	100	43.345	Mandrillus_leucophaeus
ENSORLG00000016130	sall4	100	76.225	ENSMAMG00000005223	sall4	100	75.681	Mastacembelus_armatus
ENSORLG00000016130	sall4	100	75.230	ENSMZEG00005023418	sall4	100	74.770	Maylandia_zebra
ENSORLG00000016130	sall4	74	63.462	ENSMGAG00000009344	SALL4	97	63.462	Meleagris_gallopavo
ENSORLG00000016130	sall4	100	42.732	ENSMAUG00000015814	Sall4	99	75.904	Mesocricetus_auratus
ENSORLG00000016130	sall4	100	44.068	ENSMICG00000000027	SALL4	83	67.308	Microcebus_murinus
ENSORLG00000016130	sall4	100	42.105	ENSMOCG00000018245	Sall4	98	83.562	Microtus_ochrogaster
ENSORLG00000016130	sall4	100	76.313	ENSMMOG00000014929	sall4	100	75.853	Mola_mola
ENSORLG00000016130	sall4	99	47.033	ENSMODG00000016387	SALL4	97	46.649	Monodelphis_domestica
ENSORLG00000016130	sall4	100	78.624	ENSMALG00000018709	sall4	100	78.742	Monopterus_albus
ENSORLG00000016130	sall4	100	42.406	MGP_CAROLIEiJ_G0024723	Sall4	99	86.111	Mus_caroli
ENSORLG00000016130	sall4	100	43.563	ENSMUSG00000027547	Sall4	99	86.111	Mus_musculus
ENSORLG00000016130	sall4	61	59.615	MGP_PahariEiJ_G0026164	Sall4	99	86.111	Mus_pahari
ENSORLG00000016130	sall4	100	43.298	MGP_SPRETEiJ_G0025643	Sall4	99	86.111	Mus_spretus
ENSORLG00000016130	sall4	100	44.198	ENSMPUG00000017543	SALL4	96	44.239	Mustela_putorius_furo
ENSORLG00000016130	sall4	98	43.446	ENSMLUG00000007060	-	99	43.446	Myotis_lucifugus
ENSORLG00000016130	sall4	100	41.797	ENSMLUG00000008405	-	100	41.888	Myotis_lucifugus
ENSORLG00000016130	sall4	99	34.822	ENSMLUG00000028073	-	99	34.140	Myotis_lucifugus
ENSORLG00000016130	sall4	100	42.694	ENSNGAG00000017833	Sall4	100	42.694	Nannospalax_galili
ENSORLG00000016130	sall4	100	75.138	ENSNBRG00000001829	sall4	100	75.138	Neolamprologus_brichardi
ENSORLG00000016130	sall4	100	43.351	ENSNLEG00000007013	SALL4	100	43.440	Nomascus_leucogenys
ENSORLG00000016130	sall4	85	63.462	ENSMEUG00000005793	-	99	63.462	Notamacropus_eugenii
ENSORLG00000016130	sall4	100	43.761	ENSOPRG00000011640	SALL4	100	43.712	Ochotona_princeps
ENSORLG00000016130	sall4	100	75.989	ENSONIG00000016557	sall4	100	76.081	Oreochromis_niloticus
ENSORLG00000016130	sall4	99	51.390	ENSOANG00000008667	SALL4	97	51.587	Ornithorhynchus_anatinus
ENSORLG00000016130	sall4	98	44.789	ENSOCUG00000011797	SALL4	99	44.705	Oryctolagus_cuniculus
ENSORLG00000016130	sall4	100	98.586	ENSORLG00020007339	sall4	100	98.586	Oryzias_latipes_hni
ENSORLG00000016130	sall4	100	98.682	ENSORLG00015002265	sall4	100	98.682	Oryzias_latipes_hsok
ENSORLG00000016130	sall4	100	92.228	ENSOMEG00000017344	sall4	100	92.228	Oryzias_melastigma
ENSORLG00000016130	sall4	97	44.902	ENSOGAG00000013799	SALL4	99	44.902	Otolemur_garnettii
ENSORLG00000016130	sall4	100	41.667	ENSOARG00000014570	SALL4	100	41.161	Ovis_aries
ENSORLG00000016130	sall4	100	43.574	ENSPPAG00000038064	SALL4	100	43.509	Pan_paniscus
ENSORLG00000016130	sall4	100	43.902	ENSPPRG00000008677	SALL4	100	43.902	Panthera_pardus
ENSORLG00000016130	sall4	100	43.662	ENSPTRG00000013631	SALL4	100	43.596	Pan_troglodytes
ENSORLG00000016130	sall4	86	45.551	ENSPANG00000021792	SALL4	71	67.308	Papio_anubis
ENSORLG00000016130	sall4	100	61.991	ENSPKIG00000007074	sall4	100	62.341	Paramormyrops_kingsleyae
ENSORLG00000016130	sall4	99	50.217	ENSPSIG00000009066	SALL4	99	51.008	Pelodiscus_sinensis
ENSORLG00000016130	sall4	100	65.335	ENSPMGG00000022551	sall4	100	65.863	Periophthalmus_magnuspinnatus
ENSORLG00000016130	sall4	100	42.230	ENSPEMG00000022706	Sall4	99	86.111	Peromyscus_maniculatus_bairdii
ENSORLG00000016130	sall4	99	47.965	ENSPCIG00000022838	SALL4	97	47.935	Phascolarctos_cinereus
ENSORLG00000016130	sall4	100	76.590	ENSPFOG00000001442	sall4	100	76.590	Poecilia_formosa
ENSORLG00000016130	sall4	100	76.498	ENSPLAG00000008760	sall4	100	76.498	Poecilia_latipinna
ENSORLG00000016130	sall4	100	76.590	ENSPMEG00000008497	sall4	100	76.590	Poecilia_mexicana
ENSORLG00000016130	sall4	100	75.945	ENSPREG00000021140	sall4	100	75.945	Poecilia_reticulata
ENSORLG00000016130	sall4	100	43.224	ENSPPYG00000011138	SALL4	100	43.224	Pongo_abelii
ENSORLG00000016130	sall4	100	41.800	ENSPCAG00000004726	SALL4	99	41.889	Procavia_capensis
ENSORLG00000016130	sall4	100	43.339	ENSPCOG00000016321	SALL4	100	43.339	Propithecus_coquereli
ENSORLG00000016130	sall4	94	43.154	ENSPVAG00000002075	SALL4	94	43.059	Pteropus_vampyrus
ENSORLG00000016130	sall4	100	75.300	ENSPNYG00000021738	sall4	100	74.839	Pundamilia_nyererei
ENSORLG00000016130	sall4	99	65.091	ENSPNAG00000020929	sall4	99	65.273	Pygocentrus_nattereri
ENSORLG00000016130	sall4	100	42.882	ENSRNOG00000050035	Sall4	87	65.385	Rattus_norvegicus
ENSORLG00000016130	sall4	100	43.717	ENSRBIG00000039876	SALL4	100	43.540	Rhinopithecus_bieti
ENSORLG00000016130	sall4	100	43.982	ENSRROG00000036585	SALL4	100	43.805	Rhinopithecus_roxellana
ENSORLG00000016130	sall4	100	44.209	ENSSBOG00000030011	SALL4	100	43.861	Saimiri_boliviensis_boliviensis
ENSORLG00000016130	sall4	95	65.385	ENSSHAG00000018013	SALL4	88	65.385	Sarcophilus_harrisii
ENSORLG00000016130	sall4	100	61.909	ENSSFOG00015021075	sall4	100	61.413	Scleropages_formosus
ENSORLG00000016130	sall4	100	76.395	ENSSMAG00000019218	sall4	99	76.212	Scophthalmus_maximus
ENSORLG00000016130	sall4	100	79.853	ENSSDUG00000004657	sall4	100	79.487	Seriola_dumerili
ENSORLG00000016130	sall4	100	78.480	ENSSLDG00000004973	sall4	100	78.938	Seriola_lalandi_dorsalis
ENSORLG00000016130	sall4	100	78.657	ENSSPAG00000001978	sall4	100	78.381	Stegastes_partitus
ENSORLG00000016130	sall4	100	43.822	ENSSSCG00000007479	SALL4	100	43.463	Sus_scrofa
ENSORLG00000016130	sall4	100	74.839	ENSTRUG00000007410	sall4	100	74.105	Takifugu_rubripes
ENSORLG00000016130	sall4	100	73.073	ENSTNIG00000012460	sall4	100	72.669	Tetraodon_nigroviridis
ENSORLG00000016130	sall4	98	43.814	ENSTTRG00000007753	SALL4	99	43.373	Tursiops_truncatus
ENSORLG00000016130	sall4	100	44.425	ENSUAMG00000010113	SALL4	100	44.514	Ursus_americanus
ENSORLG00000016130	sall4	98	44.590	ENSUMAG00000024274	SALL4	98	44.590	Ursus_maritimus
ENSORLG00000016130	sall4	100	47.792	ENSXETG00000012326	sall4	100	47.764	Xenopus_tropicalis
ENSORLG00000016130	sall4	100	69.032	ENSXCOG00000015467	sall4	100	68.756	Xiphophorus_couchianus
ENSORLG00000016130	sall4	100	69.545	ENSXMAG00000012692	sall4	100	69.545	Xiphophorus_maculatus