EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000016169 (Gene tree)
Gene ID: -
Gene Symbol: zmat4b
Alias: -
Full Name: zinc finger%2C matrin-type 4b
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 87970 bases
Position: chr9:26381880-26469849
Accession: ZDB-GENE-091118-68
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000039813	zf-met	PF12874.7	1.9e-14	1	2
ENSORLP00000039813	zf-met	PF12874.7	1.9e-14	2	2
ENSORLP00000020232	zf-met	PF12874.7	5.2e-14	1	2
ENSORLP00000020232	zf-met	PF12874.7	5.2e-14	2	2
ENSORLP00000034141	zf-met	PF12874.7	1.7e-07	1	1
ENSORLP00000039813	zf-C2H2_jaz	PF12171.8	4.6e-11	1	1
ENSORLP00000020232	zf-C2H2_jaz	PF12171.8	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000031228	-	458	-	ENSORLP00000039813	146 (aa)	-	-
ENSORLT00000020233	-	654	-	ENSORLP00000020232	217 (aa)	-	H2MNC9
ENSORLT00000041201	-	552	-	ENSORLP00000034141	183 (aa)	-	-

Gene Model

Click here to download ENSORLG00000016169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000016169's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000016169	zmat4b	78	72.414	ENSORLG00000007607	zgc:171482	83	71.186

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000016169	zmat4b	91	77.444	ENSG00000165061	ZMAT4	85	77.444	Homo_sapiens
ENSORLG00000016169	zmat4b	77	84.071	ENSAMEG00000002758	ZMAT4	50	84.071	Ailuropoda_melanoleuca
ENSORLG00000016169	zmat4b	79	96.552	ENSACIG00000009080	zmat4a	55	96.552	Amphilophus_citrinellus
ENSORLG00000016169	zmat4b	79	98.276	ENSAOCG00000004416	zmat4a	56	95.172	Amphiprion_ocellaris
ENSORLG00000016169	zmat4b	79	98.276	ENSAPEG00000018565	zmat4a	56	95.172	Amphiprion_percula
ENSORLG00000016169	zmat4b	80	97.436	ENSATEG00000012630	zmat4a	82	97.436	Anabas_testudineus
ENSORLG00000016169	zmat4b	79	86.087	ENSAPLG00000006106	ZMAT4	50	86.087	Anas_platyrhynchos
ENSORLG00000016169	zmat4b	77	84.956	ENSACAG00000005388	ZMAT4	56	83.761	Anolis_carolinensis
ENSORLG00000016169	zmat4b	91	77.444	ENSANAG00000027926	ZMAT4	85	77.444	Aotus_nancymaae
ENSORLG00000016169	zmat4b	79	95.690	ENSACLG00000005038	zmat4a	56	93.103	Astatotilapia_calliptera
ENSORLG00000016169	zmat4b	79	95.652	ENSAMXG00000035337	zmat4a	75	95.652	Astyanax_mexicanus
ENSORLG00000016169	zmat4b	77	84.071	ENSCHIG00000022017	ZMAT4	50	84.071	Capra_hircus
ENSORLG00000016169	zmat4b	91	77.444	ENSCCAG00000027437	ZMAT4	85	77.444	Cebus_capucinus
ENSORLG00000016169	zmat4b	91	77.444	ENSCATG00000044978	ZMAT4	85	77.444	Cercocebus_atys
ENSORLG00000016169	zmat4b	77	84.956	ENSCSAG00000015108	ZMAT4	50	84.956	Chlorocebus_sabaeus
ENSORLG00000016169	zmat4b	77	84.956	ENSCHOG00000003755	ZMAT4	50	84.956	Choloepus_hoffmanni
ENSORLG00000016169	zmat4b	82	84.874	ENSCPBG00000002781	ZMAT4	76	84.874	Chrysemys_picta_bellii
ENSORLG00000016169	zmat4b	77	85.841	ENSCGRG00000002696	Zmat4	79	88.889	Cricetulus_griseus_crigri
ENSORLG00000016169	zmat4b	79	95.690	ENSCSEG00000013707	zmat4a	59	90.345	Cynoglossus_semilaevis
ENSORLG00000016169	zmat4b	79	96.552	ENSCVAG00000000113	zmat4a	56	90.345	Cyprinodon_variegatus
ENSORLG00000016169	zmat4b	80	97.436	ENSDARG00000092987	zmat4a	79	97.436	Danio_rerio
ENSORLG00000016169	zmat4b	79	91.379	ENSDARG00000061419	zmat4b	59	91.379	Danio_rerio
ENSORLG00000016169	zmat4b	77	84.956	ENSDNOG00000001045	ZMAT4	50	84.956	Dasypus_novemcinctus
ENSORLG00000016169	zmat4b	77	62.832	ENSEEUG00000002565	ZMAT4	50	62.832	Erinaceus_europaeus
ENSORLG00000016169	zmat4b	79	98.276	ENSELUG00000005097	zmat4a	57	93.793	Esox_lucius
ENSORLG00000016169	zmat4b	91	77.444	ENSFCAG00000012775	ZMAT4	85	77.444	Felis_catus
ENSORLG00000016169	zmat4b	79	86.957	ENSFALG00000006455	ZMAT4	51	86.957	Ficedula_albicollis
ENSORLG00000016169	zmat4b	79	97.414	ENSFHEG00000022872	zmat4b	51	99.083	Fundulus_heteroclitus
ENSORLG00000016169	zmat4b	79	93.966	ENSGMOG00000007950	zmat4a	52	93.966	Gadus_morhua
ENSORLG00000016169	zmat4b	82	83.193	ENSGALG00000003470	ZMAT4	52	83.193	Gallus_gallus
ENSORLG00000016169	zmat4b	98	81.119	ENSGAFG00000013149	zmat4a	57	89.933	Gambusia_affinis
ENSORLG00000016169	zmat4b	90	90.076	ENSGACG00000005515	zmat4a	84	90.076	Gasterosteus_aculeatus
ENSORLG00000016169	zmat4b	82	84.874	ENSGAGG00000004799	ZMAT4	86	84.874	Gopherus_agassizii
ENSORLG00000016169	zmat4b	91	77.444	ENSGGOG00000006633	ZMAT4	85	77.444	Gorilla_gorilla
ENSORLG00000016169	zmat4b	79	96.552	ENSHBUG00000012634	zmat4a	56	93.793	Haplochromis_burtoni
ENSORLG00000016169	zmat4b	82	82.500	ENSHGLG00000003246	ZMAT4	52	82.500	Heterocephalus_glaber_female
ENSORLG00000016169	zmat4b	80	94.872	ENSHCOG00000006516	zmat4b	94	94.872	Hippocampus_comes
ENSORLG00000016169	zmat4b	79	92.241	ENSIPUG00000022248	zmat4	57	82.759	Ictalurus_punctatus
ENSORLG00000016169	zmat4b	82	82.645	ENSJJAG00000013484	Zmat4	53	82.645	Jaculus_jaculus
ENSORLG00000016169	zmat4b	90	85.185	ENSLACG00000006206	-	88	85.185	Latimeria_chalumnae
ENSORLG00000016169	zmat4b	53	54.118	ENSLACG00000005109	-	58	54.118	Latimeria_chalumnae
ENSORLG00000016169	zmat4b	79	96.552	ENSLOCG00000015435	zmat4b	51	96.552	Lepisosteus_oculatus
ENSORLG00000016169	zmat4b	77	85.841	ENSLAFG00000014753	ZMAT4	50	85.841	Loxodonta_africana
ENSORLG00000016169	zmat4b	91	77.444	ENSMFAG00000043475	ZMAT4	85	77.444	Macaca_fascicularis
ENSORLG00000016169	zmat4b	91	77.444	ENSMNEG00000042102	ZMAT4	85	77.444	Macaca_nemestrina
ENSORLG00000016169	zmat4b	91	77.444	ENSMLEG00000034448	ZMAT4	85	77.444	Mandrillus_leucophaeus
ENSORLG00000016169	zmat4b	80	94.872	ENSMAMG00000019914	zmat4a	77	94.872	Mastacembelus_armatus
ENSORLG00000016169	zmat4b	79	96.552	ENSMZEG00005004946	zmat4a	56	93.793	Maylandia_zebra
ENSORLG00000016169	zmat4b	81	83.051	ENSMGAG00000002288	ZMAT4	51	85.217	Meleagris_gallopavo
ENSORLG00000016169	zmat4b	82	97.479	ENSMMOG00000012619	zmat4a	88	97.479	Mola_mola
ENSORLG00000016169	zmat4b	79	98.276	ENSMALG00000015056	zmat4a	56	95.172	Monopterus_albus
ENSORLG00000016169	zmat4b	77	85.841	MGP_CAROLIEiJ_G0030909	Zmat4	100	86.458	Mus_caroli
ENSORLG00000016169	zmat4b	77	85.841	ENSMUSG00000037492	Zmat4	100	86.458	Mus_musculus
ENSORLG00000016169	zmat4b	77	85.841	MGP_PahariEiJ_G0021380	Zmat4	100	86.458	Mus_pahari
ENSORLG00000016169	zmat4b	77	85.841	MGP_SPRETEiJ_G0032028	Zmat4	100	86.458	Mus_spretus
ENSORLG00000016169	zmat4b	83	93.388	ENSNBRG00000011844	zmat4a	55	93.388	Neolamprologus_brichardi
ENSORLG00000016169	zmat4b	91	77.444	ENSNLEG00000012564	ZMAT4	85	77.444	Nomascus_leucogenys
ENSORLG00000016169	zmat4b	79	84.348	ENSMEUG00000000558	ZMAT4	51	84.348	Notamacropus_eugenii
ENSORLG00000016169	zmat4b	81	85.593	ENSOANG00000022431	ZMAT4	87	83.193	Ornithorhynchus_anatinus
ENSORLG00000016169	zmat4b	87	99.468	ENSORLG00020019602	zmat4a	82	99.468	Oryzias_latipes_hni
ENSORLG00000016169	zmat4b	87	99.468	ENSORLG00015009006	zmat4a	82	99.468	Oryzias_latipes_hsok
ENSORLG00000016169	zmat4b	86	95.722	ENSOMEG00000003441	zmat4a	63	95.722	Oryzias_melastigma
ENSORLG00000016169	zmat4b	77	83.186	ENSOGAG00000012558	ZMAT4	50	83.186	Otolemur_garnettii
ENSORLG00000016169	zmat4b	77	84.956	ENSPPAG00000042573	ZMAT4	56	88.235	Pan_paniscus
ENSORLG00000016169	zmat4b	91	76.692	ENSPPRG00000007023	ZMAT4	85	76.692	Panthera_pardus
ENSORLG00000016169	zmat4b	91	76.692	ENSPTIG00000019738	ZMAT4	85	76.692	Panthera_tigris_altaica
ENSORLG00000016169	zmat4b	91	77.444	ENSPTRG00000020191	ZMAT4	85	77.444	Pan_troglodytes
ENSORLG00000016169	zmat4b	91	77.444	ENSPANG00000014196	ZMAT4	85	77.444	Papio_anubis
ENSORLG00000016169	zmat4b	78	83.333	ENSPKIG00000021792	zmat4b	75	83.333	Paramormyrops_kingsleyae
ENSORLG00000016169	zmat4b	79	93.103	ENSPKIG00000000048	zmat4a	56	88.276	Paramormyrops_kingsleyae
ENSORLG00000016169	zmat4b	79	87.826	ENSPSIG00000004847	ZMAT4	50	87.826	Pelodiscus_sinensis
ENSORLG00000016169	zmat4b	78	97.368	ENSPMGG00000001436	zmat4b	60	94.167	Periophthalmus_magnuspinnatus
ENSORLG00000016169	zmat4b	87	77.953	ENSPCIG00000028706	ZMAT4	77	78.125	Phascolarctos_cinereus
ENSORLG00000016169	zmat4b	82	96.667	ENSPFOG00000006742	zmat4a	57	89.933	Poecilia_formosa
ENSORLG00000016169	zmat4b	82	96.667	ENSPLAG00000019268	zmat4a	59	89.933	Poecilia_latipinna
ENSORLG00000016169	zmat4b	82	96.667	ENSPMEG00000007870	zmat4a	52	96.667	Poecilia_mexicana
ENSORLG00000016169	zmat4b	82	96.667	ENSPREG00000014914	zmat4a	57	89.933	Poecilia_reticulata
ENSORLG00000016169	zmat4b	91	77.444	ENSPCOG00000007717	ZMAT4	85	77.444	Propithecus_coquereli
ENSORLG00000016169	zmat4b	79	84.348	ENSPVAG00000011393	ZMAT4	50	84.348	Pteropus_vampyrus
ENSORLG00000016169	zmat4b	80	95.726	ENSPNYG00000006173	zmat4a	55	90.260	Pundamilia_nyererei
ENSORLG00000016169	zmat4b	77	88.496	ENSPNAG00000023764	zmat4b	50	88.496	Pygocentrus_nattereri
ENSORLG00000016169	zmat4b	79	97.414	ENSPNAG00000009604	zmat4a	56	92.414	Pygocentrus_nattereri
ENSORLG00000016169	zmat4b	91	77.444	ENSRBIG00000031887	ZMAT4	85	77.444	Rhinopithecus_bieti
ENSORLG00000016169	zmat4b	91	77.444	ENSRROG00000040877	ZMAT4	85	77.444	Rhinopithecus_roxellana
ENSORLG00000016169	zmat4b	91	77.444	ENSSBOG00000017391	ZMAT4	85	77.444	Saimiri_boliviensis_boliviensis
ENSORLG00000016169	zmat4b	82	92.437	ENSSFOG00015013158	zmat4	72	92.982	Scleropages_formosus
ENSORLG00000016169	zmat4b	79	78.448	ENSSFOG00015015440	zmat4b	94	78.448	Scleropages_formosus
ENSORLG00000016169	zmat4b	90	91.603	ENSSMAG00000017693	zmat4a	70	90.123	Scophthalmus_maximus
ENSORLG00000016169	zmat4b	90	91.603	ENSSDUG00000005878	zmat4a	69	90.000	Seriola_dumerili
ENSORLG00000016169	zmat4b	79	98.276	ENSSLDG00000012934	zmat4a	56	95.172	Seriola_lalandi_dorsalis
ENSORLG00000016169	zmat4b	77	84.071	ENSSARG00000003679	ZMAT4	50	84.071	Sorex_araneus
ENSORLG00000016169	zmat4b	80	97.436	ENSSPAG00000021408	zmat4a	56	93.960	Stegastes_partitus
ENSORLG00000016169	zmat4b	79	86.957	ENSTGUG00000005159	ZMAT4	51	86.957	Taeniopygia_guttata
ENSORLG00000016169	zmat4b	80	97.436	ENSTRUG00000005170	zmat4a	62	81.915	Takifugu_rubripes
ENSORLG00000016169	zmat4b	86	76.923	ENSTNIG00000018863	zmat4b	86	76.923	Tetraodon_nigroviridis
ENSORLG00000016169	zmat4b	82	82.500	ENSTTRG00000009606	ZMAT4	52	82.500	Tursiops_truncatus
ENSORLG00000016169	zmat4b	77	84.071	ENSUMAG00000025578	ZMAT4	50	84.071	Ursus_maritimus
ENSORLG00000016169	zmat4b	77	84.071	ENSVVUG00000020407	ZMAT4	50	84.071	Vulpes_vulpes
ENSORLG00000016169	zmat4b	82	71.200	ENSXCOG00000015061	zmat4b	89	71.200	Xiphophorus_couchianus
ENSORLG00000016169	zmat4b	82	96.667	ENSXMAG00000010461	zmat4a	57	89.933	Xiphophorus_maculatus