EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000016228 (Gene tree)
Gene ID: 101163566
Gene Symbol: pusl1
Alias: -
Full Name: pseudouridine synthase like 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 13035 bases
Position: chr5:29361422-29374456
Accession: 101163566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000043895	PseudoU_synth_1	PF01416.20	7.7e-33	1	2
ENSORLP00000043895	PseudoU_synth_1	PF01416.20	7.7e-33	2	2
ENSORLP00000020317	PseudoU_synth_1	PF01416.20	3.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000020318	-	1186	-	ENSORLP00000020317	297 (aa)	-	H2MNL1
ENSORLT00000035372	-	3360	XM_004069169	ENSORLP00000043895	296 (aa)	XP_004069217	UPI0002A4961B

Gene Model

Click here to download ENSORLG00000016228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000016228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000016228	pusl1	97	48.789	ENSG00000169972	PUSL1	97	47.967	Homo_sapiens
ENSORLG00000016228	pusl1	96	72.438	ENSAPOG00000016290	pusl1	95	72.438	Acanthochromis_polyacanthus
ENSORLG00000016228	pusl1	93	48.551	ENSAMEG00000013752	PUSL1	90	48.551	Ailuropoda_melanoleuca
ENSORLG00000016228	pusl1	93	71.533	ENSACIG00000015240	pusl1	100	71.533	Amphilophus_citrinellus
ENSORLG00000016228	pusl1	97	69.338	ENSAOCG00000019419	pusl1	86	69.338	Amphiprion_ocellaris
ENSORLG00000016228	pusl1	96	71.025	ENSAPEG00000005452	pusl1	95	71.025	Amphiprion_percula
ENSORLG00000016228	pusl1	99	70.748	ENSATEG00000024154	pusl1	98	70.748	Anabas_testudineus
ENSORLG00000016228	pusl1	93	51.625	ENSAPLG00000004946	PUSL1	92	51.625	Anas_platyrhynchos
ENSORLG00000016228	pusl1	87	50.965	ENSACAG00000014111	PUSL1	98	50.965	Anolis_carolinensis
ENSORLG00000016228	pusl1	97	48.789	ENSANAG00000037456	PUSL1	93	48.789	Aotus_nancymaae
ENSORLG00000016228	pusl1	99	72.603	ENSACLG00000008675	pusl1	97	72.603	Astatotilapia_calliptera
ENSORLG00000016228	pusl1	95	59.220	ENSAMXG00000044007	pusl1	95	59.220	Astyanax_mexicanus
ENSORLG00000016228	pusl1	93	50.362	ENSBTAG00000007619	PUSL1	94	50.362	Bos_taurus
ENSORLG00000016228	pusl1	97	48.097	ENSCJAG00000010972	PUSL1	93	48.097	Callithrix_jacchus
ENSORLG00000016228	pusl1	93	47.464	ENSCAFG00000019291	PUSL1	90	47.464	Canis_familiaris
ENSORLG00000016228	pusl1	93	48.551	ENSCAFG00020011568	PUSL1	89	48.551	Canis_lupus_dingo
ENSORLG00000016228	pusl1	93	50.000	ENSCHIG00000012615	PUSL1	95	50.000	Capra_hircus
ENSORLG00000016228	pusl1	92	47.636	ENSCPOG00000005149	PUSL1	89	47.636	Cavia_porcellus
ENSORLG00000016228	pusl1	97	48.097	ENSCCAG00000027475	PUSL1	93	48.097	Cebus_capucinus
ENSORLG00000016228	pusl1	97	48.789	ENSCATG00000018260	PUSL1	93	48.789	Cercocebus_atys
ENSORLG00000016228	pusl1	95	47.518	ENSCLAG00000005232	PUSL1	91	47.518	Chinchilla_lanigera
ENSORLG00000016228	pusl1	97	49.485	ENSCSAG00000000680	PUSL1	93	49.485	Chlorocebus_sabaeus
ENSORLG00000016228	pusl1	94	54.839	ENSCPBG00000022621	PUSL1	95	54.839	Chrysemys_picta_bellii
ENSORLG00000016228	pusl1	97	48.789	ENSCANG00000034373	PUSL1	93	48.789	Colobus_angolensis_palliatus
ENSORLG00000016228	pusl1	93	48.188	ENSCGRG00001012429	Pusl1	94	48.188	Cricetulus_griseus_chok1gshd
ENSORLG00000016228	pusl1	93	47.826	ENSCGRG00000006466	Pusl1	94	47.826	Cricetulus_griseus_crigri
ENSORLG00000016228	pusl1	97	68.641	ENSCSEG00000005159	pusl1	96	68.641	Cynoglossus_semilaevis
ENSORLG00000016228	pusl1	80	58.506	ENSCVAG00000012923	pusl1	91	58.506	Cyprinodon_variegatus
ENSORLG00000016228	pusl1	94	64.875	ENSDARG00000074565	pusl1	97	64.621	Danio_rerio
ENSORLG00000016228	pusl1	94	33.770	FBgn0083976	CG34140	99	33.770	Drosophila_melanogaster
ENSORLG00000016228	pusl1	97	48.980	ENSECAG00000006248	PUSL1	96	48.980	Equus_caballus
ENSORLG00000016228	pusl1	95	46.831	ENSEEUG00000000837	PUSL1	95	46.831	Erinaceus_europaeus
ENSORLG00000016228	pusl1	95	63.830	ENSELUG00000015945	pusl1	96	63.830	Esox_lucius
ENSORLG00000016228	pusl1	97	49.135	ENSFCAG00000007617	PUSL1	94	49.135	Felis_catus
ENSORLG00000016228	pusl1	100	74.074	ENSFHEG00000006370	pusl1	99	74.074	Fundulus_heteroclitus
ENSORLG00000016228	pusl1	95	70.213	ENSGMOG00000019388	pusl1	100	70.213	Gadus_morhua
ENSORLG00000016228	pusl1	94	51.971	ENSGALG00000001714	PUSL1	96	51.971	Gallus_gallus
ENSORLG00000016228	pusl1	96	71.378	ENSGAFG00000007546	pusl1	96	71.378	Gambusia_affinis
ENSORLG00000016228	pusl1	99	68.475	ENSGACG00000007848	pusl1	97	68.475	Gasterosteus_aculeatus
ENSORLG00000016228	pusl1	94	54.480	ENSGAGG00000004730	PUSL1	95	54.480	Gopherus_agassizii
ENSORLG00000016228	pusl1	81	50.207	ENSGGOG00000005364	PUSL1	93	50.207	Gorilla_gorilla
ENSORLG00000016228	pusl1	99	72.603	ENSHBUG00000001264	pusl1	97	72.603	Haplochromis_burtoni
ENSORLG00000016228	pusl1	93	48.014	ENSHGLG00000017570	PUSL1	89	48.014	Heterocephalus_glaber_female
ENSORLG00000016228	pusl1	83	48.193	ENSHGLG00100007641	PUSL1	82	48.193	Heterocephalus_glaber_male
ENSORLG00000016228	pusl1	95	68.327	ENSHCOG00000010077	pusl1	100	69.203	Hippocampus_comes
ENSORLG00000016228	pusl1	94	62.950	ENSIPUG00000023921	pusl1	95	62.950	Ictalurus_punctatus
ENSORLG00000016228	pusl1	93	50.000	ENSSTOG00000001783	PUSL1	85	50.000	Ictidomys_tridecemlineatus
ENSORLG00000016228	pusl1	99	47.279	ENSJJAG00000020471	Pusl1	93	49.275	Jaculus_jaculus
ENSORLG00000016228	pusl1	92	67.033	ENSKMAG00000005154	pusl1	93	67.033	Kryptolebias_marmoratus
ENSORLG00000016228	pusl1	97	71.429	ENSLBEG00000013469	pusl1	98	71.429	Labrus_bergylta
ENSORLG00000016228	pusl1	65	54.404	ENSLACG00000018795	PUSL1	95	54.404	Latimeria_chalumnae
ENSORLG00000016228	pusl1	96	55.634	ENSLOCG00000002210	pusl1	96	55.634	Lepisosteus_oculatus
ENSORLG00000016228	pusl1	83	50.806	ENSLAFG00000013685	PUSL1	92	50.806	Loxodonta_africana
ENSORLG00000016228	pusl1	97	48.789	ENSMFAG00000046288	PUSL1	93	48.789	Macaca_fascicularis
ENSORLG00000016228	pusl1	93	43.116	ENSMMUG00000016279	PUSL1	89	43.116	Macaca_mulatta
ENSORLG00000016228	pusl1	93	49.275	ENSMNEG00000037989	PUSL1	90	49.275	Macaca_nemestrina
ENSORLG00000016228	pusl1	97	68.641	ENSMAMG00000016538	pusl1	95	68.641	Mastacembelus_armatus
ENSORLG00000016228	pusl1	99	72.603	ENSMZEG00005026990	pusl1	97	72.603	Maylandia_zebra
ENSORLG00000016228	pusl1	94	51.254	ENSMGAG00000003037	PUSL1	95	51.254	Meleagris_gallopavo
ENSORLG00000016228	pusl1	93	47.826	ENSMAUG00000019924	Pusl1	94	47.826	Mesocricetus_auratus
ENSORLG00000016228	pusl1	93	51.625	ENSMICG00000014171	PUSL1	93	51.625	Microcebus_murinus
ENSORLG00000016228	pusl1	93	49.275	ENSMOCG00000005602	Pusl1	94	49.275	Microtus_ochrogaster
ENSORLG00000016228	pusl1	94	69.643	ENSMMOG00000003269	pusl1	100	69.643	Mola_mola
ENSORLG00000016228	pusl1	97	70.139	ENSMALG00000021686	pusl1	95	70.139	Monopterus_albus
ENSORLG00000016228	pusl1	93	47.842	MGP_CAROLIEiJ_G0026911	Pusl1	94	47.842	Mus_caroli
ENSORLG00000016228	pusl1	93	47.842	ENSMUSG00000051557	Pusl1	94	47.842	Mus_musculus
ENSORLG00000016228	pusl1	93	48.201	MGP_PahariEiJ_G0029260	Pusl1	94	48.201	Mus_pahari
ENSORLG00000016228	pusl1	93	48.201	MGP_SPRETEiJ_G0027906	Pusl1	94	48.201	Mus_spretus
ENSORLG00000016228	pusl1	93	49.819	ENSMPUG00000014313	PUSL1	90	49.819	Mustela_putorius_furo
ENSORLG00000016228	pusl1	93	48.921	ENSNGAG00000004647	Pusl1	82	48.921	Nannospalax_galili
ENSORLG00000016228	pusl1	95	63.604	ENSNBRG00000014762	pusl1	96	63.604	Neolamprologus_brichardi
ENSORLG00000016228	pusl1	88	50.769	ENSNLEG00000000051	PUSL1	93	50.769	Nomascus_leucogenys
ENSORLG00000016228	pusl1	93	51.986	ENSMEUG00000011649	-	96	51.986	Notamacropus_eugenii
ENSORLG00000016228	pusl1	92	41.392	ENSMEUG00000005176	-	98	41.392	Notamacropus_eugenii
ENSORLG00000016228	pusl1	95	48.227	ENSODEG00000008247	PUSL1	90	48.227	Octodon_degus
ENSORLG00000016228	pusl1	99	72.260	ENSONIG00000019361	pusl1	97	72.260	Oreochromis_niloticus
ENSORLG00000016228	pusl1	100	97.297	ENSORLG00020013710	pusl1	100	97.297	Oryzias_latipes_hni
ENSORLG00000016228	pusl1	95	98.221	ENSORLG00015008715	pusl1	99	98.221	Oryzias_latipes_hsok
ENSORLG00000016228	pusl1	97	87.456	ENSOMEG00000018897	pusl1	99	87.456	Oryzias_melastigma
ENSORLG00000016228	pusl1	93	50.360	ENSOGAG00000031692	PUSL1	95	50.360	Otolemur_garnettii
ENSORLG00000016228	pusl1	83	50.806	ENSOARG00000004905	PUSL1	92	50.806	Ovis_aries
ENSORLG00000016228	pusl1	97	49.481	ENSPPAG00000029283	PUSL1	93	49.481	Pan_paniscus
ENSORLG00000016228	pusl1	93	50.000	ENSPPRG00000023329	PUSL1	91	50.000	Panthera_pardus
ENSORLG00000016228	pusl1	83	50.806	ENSPTIG00000018532	PUSL1	91	50.806	Panthera_tigris_altaica
ENSORLG00000016228	pusl1	97	49.135	ENSPTRG00000000021	PUSL1	93	49.135	Pan_troglodytes
ENSORLG00000016228	pusl1	97	48.789	ENSPANG00000000591	PUSL1	93	48.789	Papio_anubis
ENSORLG00000016228	pusl1	95	62.411	ENSPKIG00000002447	pusl1	97	62.411	Paramormyrops_kingsleyae
ENSORLG00000016228	pusl1	85	55.952	ENSPSIG00000002781	PUSL1	93	55.952	Pelodiscus_sinensis
ENSORLG00000016228	pusl1	93	65.217	ENSPMGG00000011051	pusl1	99	65.217	Periophthalmus_magnuspinnatus
ENSORLG00000016228	pusl1	93	49.275	ENSPEMG00000013541	Pusl1	94	49.275	Peromyscus_maniculatus_bairdii
ENSORLG00000016228	pusl1	94	50.890	ENSPCIG00000007816	-	64	51.237	Phascolarctos_cinereus
ENSORLG00000016228	pusl1	98	70.690	ENSPFOG00000015448	pusl1	96	70.690	Poecilia_formosa
ENSORLG00000016228	pusl1	97	71.429	ENSPLAG00000004348	pusl1	97	71.429	Poecilia_latipinna
ENSORLG00000016228	pusl1	97	71.429	ENSPMEG00000000931	pusl1	97	71.429	Poecilia_mexicana
ENSORLG00000016228	pusl1	97	71.429	ENSPREG00000002324	pusl1	97	71.429	Poecilia_reticulata
ENSORLG00000016228	pusl1	85	46.275	ENSPPYG00000002014	PUSL1	91	46.275	Pongo_abelii
ENSORLG00000016228	pusl1	79	43.404	ENSPCAG00000002272	PUSL1	95	43.404	Procavia_capensis
ENSORLG00000016228	pusl1	70	51.389	ENSPVAG00000001016	PUSL1	68	51.389	Pteropus_vampyrus
ENSORLG00000016228	pusl1	81	75.417	ENSPNYG00000006588	pusl1	100	75.417	Pundamilia_nyererei
ENSORLG00000016228	pusl1	95	61.210	ENSPNAG00000024441	pusl1	97	61.210	Pygocentrus_nattereri
ENSORLG00000016228	pusl1	93	48.551	ENSRNOG00000022354	Pusl1	94	48.551	Rattus_norvegicus
ENSORLG00000016228	pusl1	97	48.443	ENSRBIG00000036842	PUSL1	93	48.443	Rhinopithecus_bieti
ENSORLG00000016228	pusl1	93	49.275	ENSRROG00000030704	PUSL1	90	49.275	Rhinopithecus_roxellana
ENSORLG00000016228	pusl1	88	47.893	ENSSBOG00000032249	PUSL1	92	47.893	Saimiri_boliviensis_boliviensis
ENSORLG00000016228	pusl1	52	49.677	ENSSHAG00000004840	-	84	47.561	Sarcophilus_harrisii
ENSORLG00000016228	pusl1	97	61.458	ENSSFOG00015008281	pusl1	95	61.458	Scleropages_formosus
ENSORLG00000016228	pusl1	99	69.863	ENSSMAG00000007187	pusl1	97	69.863	Scophthalmus_maximus
ENSORLG00000016228	pusl1	99	70.748	ENSSDUG00000000287	pusl1	91	70.748	Seriola_dumerili
ENSORLG00000016228	pusl1	99	71.233	ENSSLDG00000009605	pusl1	93	71.233	Seriola_lalandi_dorsalis
ENSORLG00000016228	pusl1	55	50.000	ENSSARG00000005323	-	86	50.000	Sorex_araneus
ENSORLG00000016228	pusl1	93	66.423	ENSSPAG00000002528	pusl1	100	66.423	Stegastes_partitus
ENSORLG00000016228	pusl1	93	50.542	ENSSSCG00000003338	PUSL1	89	50.542	Sus_scrofa
ENSORLG00000016228	pusl1	92	51.095	ENSTGUG00000003214	PUSL1	96	51.273	Taeniopygia_guttata
ENSORLG00000016228	pusl1	96	74.205	ENSTRUG00000010102	pusl1	95	74.205	Takifugu_rubripes
ENSORLG00000016228	pusl1	61	66.298	ENSTNIG00000005789	pusl1	82	66.298	Tetraodon_nigroviridis
ENSORLG00000016228	pusl1	59	46.067	ENSTBEG00000005001	PUSL1	74	46.067	Tupaia_belangeri
ENSORLG00000016228	pusl1	93	43.682	ENSTTRG00000017030	PUSL1	90	43.682	Tursiops_truncatus
ENSORLG00000016228	pusl1	87	47.308	ENSUAMG00000012801	PUSL1	83	47.308	Ursus_americanus
ENSORLG00000016228	pusl1	87	47.692	ENSUMAG00000002084	PUSL1	83	47.692	Ursus_maritimus
ENSORLG00000016228	pusl1	93	48.551	ENSVVUG00000004320	PUSL1	90	42.357	Vulpes_vulpes
ENSORLG00000016228	pusl1	77	54.783	ENSXETG00000011145	pusl1	100	54.783	Xenopus_tropicalis
ENSORLG00000016228	pusl1	95	66.904	ENSXCOG00000017748	pusl1	99	66.904	Xiphophorus_couchianus
ENSORLG00000016228	pusl1	97	71.429	ENSXMAG00000018846	pusl1	97	71.429	Xiphophorus_maculatus