EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000016263 (Gene tree)
Gene ID: 100049229
Gene Symbol: rbm8a
Alias: -
Full Name: RNA binding motif protein 8A
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 5407 bases
Position: chr16:29127928-29133334
Accession: 100049229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000020359	RRM_1	PF00076.22	4.6e-18	1	1
ENSORLP00000020359	RRM_3	PF08777.11	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000020360	-	1202	XM_011485632	ENSORLP00000020359	175 (aa)	XP_011483934	Q8JJC6

Gene Model

Click here to download ENSORLG00000016263's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03013	RNA transport	KEGG
ola03015	mRNA surveillance pathway	KEGG
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000016263's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000016263	rbm8a	86	89.404	ENSG00000265241	RBM8A	91	89.241	Homo_sapiens
ENSORLG00000016263	rbm8a	90	95.570	ENSAPOG00000009727	rbm8a	90	95.570	Acanthochromis_polyacanthus
ENSORLG00000016263	rbm8a	86	87.662	ENSAMEG00000017623	RBM8A	91	87.578	Ailuropoda_melanoleuca
ENSORLG00000016263	rbm8a	91	96.250	ENSACIG00000017678	rbm8a	100	96.250	Amphilophus_citrinellus
ENSORLG00000016263	rbm8a	90	95.570	ENSAOCG00000023887	rbm8a	76	95.570	Amphiprion_ocellaris
ENSORLG00000016263	rbm8a	90	95.570	ENSAPEG00000022847	rbm8a	76	95.570	Amphiprion_percula
ENSORLG00000016263	rbm8a	90	95.570	ENSATEG00000005630	rbm8a	90	95.570	Anabas_testudineus
ENSORLG00000016263	rbm8a	86	89.404	ENSANAG00000004525	RBM8A	91	89.241	Aotus_nancymaae
ENSORLG00000016263	rbm8a	90	94.937	ENSACLG00000009627	rbm8a	90	94.937	Astatotilapia_calliptera
ENSORLG00000016263	rbm8a	86	93.377	ENSAMXG00000040754	rbm8a	91	93.038	Astyanax_mexicanus
ENSORLG00000016263	rbm8a	83	52.703	WBGene00004387	rnp-4	83	60.331	Caenorhabditis_elegans
ENSORLG00000016263	rbm8a	86	89.404	ENSCJAG00000046869	RBM8A	91	89.241	Callithrix_jacchus
ENSORLG00000016263	rbm8a	86	89.404	ENSCAFG00000023172	RBM8A	91	89.241	Canis_familiaris
ENSORLG00000016263	rbm8a	86	89.404	ENSCAFG00020019945	RBM8A	91	89.241	Canis_lupus_dingo
ENSORLG00000016263	rbm8a	86	89.404	ENSCHIG00000012114	RBM8A	91	89.241	Capra_hircus
ENSORLG00000016263	rbm8a	86	89.404	ENSTSYG00000028809	RBM8A	91	89.241	Carlito_syrichta
ENSORLG00000016263	rbm8a	62	90.826	ENSCAPG00000014086	RBM8A	88	90.741	Cavia_aperea
ENSORLG00000016263	rbm8a	90	89.241	ENSCPOG00000022453	RBM8A	94	89.241	Cavia_porcellus
ENSORLG00000016263	rbm8a	86	89.404	ENSCCAG00000028589	-	91	89.241	Cebus_capucinus
ENSORLG00000016263	rbm8a	86	88.742	ENSCCAG00000022460	-	91	88.608	Cebus_capucinus
ENSORLG00000016263	rbm8a	86	89.404	ENSCATG00000021691	RBM8A	91	89.241	Cercocebus_atys
ENSORLG00000016263	rbm8a	86	89.404	ENSCLAG00000000547	RBM8A	91	89.241	Chinchilla_lanigera
ENSORLG00000016263	rbm8a	86	89.404	ENSCSAG00000001779	RBM8A	91	89.241	Chlorocebus_sabaeus
ENSORLG00000016263	rbm8a	86	89.404	ENSCPBG00000007941	RBM8A	73	89.241	Chrysemys_picta_bellii
ENSORLG00000016263	rbm8a	90	64.557	ENSCING00000004877	-	93	64.557	Ciona_intestinalis
ENSORLG00000016263	rbm8a	89	65.161	ENSCSAVG00000005685	-	93	64.557	Ciona_savignyi
ENSORLG00000016263	rbm8a	86	89.404	ENSCANG00000042182	RBM8A	91	89.241	Colobus_angolensis_palliatus
ENSORLG00000016263	rbm8a	89	74.839	ENSCGRG00001003032	-	91	74.684	Cricetulus_griseus_chok1gshd
ENSORLG00000016263	rbm8a	86	89.404	ENSCGRG00001002681	-	91	89.241	Cricetulus_griseus_chok1gshd
ENSORLG00000016263	rbm8a	86	89.404	ENSCGRG00000006832	-	91	89.241	Cricetulus_griseus_crigri
ENSORLG00000016263	rbm8a	90	94.937	ENSCSEG00000011865	rbm8a	90	94.937	Cynoglossus_semilaevis
ENSORLG00000016263	rbm8a	90	93.671	ENSCVAG00000020734	rbm8a	90	93.671	Cyprinodon_variegatus
ENSORLG00000016263	rbm8a	89	92.903	ENSDARG00000016516	rbm8a	91	92.405	Danio_rerio
ENSORLG00000016263	rbm8a	52	82.418	ENSDNOG00000025265	-	100	82.418	Dasypus_novemcinctus
ENSORLG00000016263	rbm8a	86	89.404	ENSDORG00000027340	-	99	82.840	Dipodomys_ordii
ENSORLG00000016263	rbm8a	94	60.714	FBgn0033378	tsu	96	62.112	Drosophila_melanogaster
ENSORLG00000016263	rbm8a	89	76.774	ENSETEG00000017932	-	91	76.582	Echinops_telfairi
ENSORLG00000016263	rbm8a	81	86.014	ENSETEG00000008411	-	81	86.014	Echinops_telfairi
ENSORLG00000016263	rbm8a	90	84.076	ENSEBUG00000010386	rbm8a	90	84.076	Eptatretus_burgeri
ENSORLG00000016263	rbm8a	86	89.404	ENSEASG00005007455	RBM8A	91	89.241	Equus_asinus_asinus
ENSORLG00000016263	rbm8a	86	89.404	ENSECAG00000022024	RBM8A	91	89.241	Equus_caballus
ENSORLG00000016263	rbm8a	86	60.927	ENSEEUG00000008823	RBM8A	91	62.025	Erinaceus_europaeus
ENSORLG00000016263	rbm8a	89	91.613	ENSELUG00000012464	rbm8a	90	91.139	Esox_lucius
ENSORLG00000016263	rbm8a	86	89.404	ENSFCAG00000033936	RBM8A	91	89.241	Felis_catus
ENSORLG00000016263	rbm8a	86	89.404	ENSFDAG00000020821	RBM8A	91	89.241	Fukomys_damarensis
ENSORLG00000016263	rbm8a	90	94.304	ENSFHEG00000013538	rbm8a	90	94.304	Fundulus_heteroclitus
ENSORLG00000016263	rbm8a	81	92.254	ENSGMOG00000007353	rbm8a	89	92.254	Gadus_morhua
ENSORLG00000016263	rbm8a	86	76.821	ENSGALG00000036283	RBM8A	90	77.215	Gallus_gallus
ENSORLG00000016263	rbm8a	90	94.937	ENSGAFG00000021698	rbm8a	90	94.937	Gambusia_affinis
ENSORLG00000016263	rbm8a	81	93.662	ENSGACG00000013157	rbm8a	89	93.662	Gasterosteus_aculeatus
ENSORLG00000016263	rbm8a	86	89.404	ENSGAGG00000023769	RBM8A	91	89.241	Gopherus_agassizii
ENSORLG00000016263	rbm8a	86	89.404	ENSGGOG00000037248	RBM8A	91	89.241	Gorilla_gorilla
ENSORLG00000016263	rbm8a	91	95.000	ENSHBUG00000008827	rbm8a	99	94.937	Haplochromis_burtoni
ENSORLG00000016263	rbm8a	86	89.404	ENSHGLG00000007303	RBM8A	91	89.241	Heterocephalus_glaber_female
ENSORLG00000016263	rbm8a	86	89.404	ENSHGLG00100012468	RBM8A	91	89.241	Heterocephalus_glaber_male
ENSORLG00000016263	rbm8a	89	93.590	ENSHCOG00000010122	rbm8a	90	92.405	Hippocampus_comes
ENSORLG00000016263	rbm8a	89	92.258	ENSIPUG00000006525	rbm8a	81	91.772	Ictalurus_punctatus
ENSORLG00000016263	rbm8a	86	88.742	ENSSTOG00000013917	RBM8A	91	88.608	Ictidomys_tridecemlineatus
ENSORLG00000016263	rbm8a	86	89.404	ENSJJAG00000009488	-	91	89.241	Jaculus_jaculus
ENSORLG00000016263	rbm8a	90	96.203	ENSKMAG00000014454	rbm8a	90	96.203	Kryptolebias_marmoratus
ENSORLG00000016263	rbm8a	90	94.937	ENSLBEG00000015720	rbm8a	90	94.937	Labrus_bergylta
ENSORLG00000016263	rbm8a	89	89.172	ENSLACG00000014365	RBM8A	91	88.750	Latimeria_chalumnae
ENSORLG00000016263	rbm8a	89	94.839	ENSLOCG00000009082	rbm8a	91	94.304	Lepisosteus_oculatus
ENSORLG00000016263	rbm8a	89	89.677	ENSLAFG00000021886	-	91	89.241	Loxodonta_africana
ENSORLG00000016263	rbm8a	99	63.483	ENSLAFG00000011031	-	91	60.123	Loxodonta_africana
ENSORLG00000016263	rbm8a	86	89.404	ENSMFAG00000045376	RBM8A	91	89.241	Macaca_fascicularis
ENSORLG00000016263	rbm8a	91	85.030	ENSMMUG00000016051	RBM8A	99	84.848	Macaca_mulatta
ENSORLG00000016263	rbm8a	86	89.404	ENSMNEG00000040422	RBM8A	91	89.241	Macaca_nemestrina
ENSORLG00000016263	rbm8a	86	89.404	ENSMLEG00000039155	RBM8A	91	89.241	Mandrillus_leucophaeus
ENSORLG00000016263	rbm8a	90	93.038	ENSMAMG00000010565	rbm8a	90	93.038	Mastacembelus_armatus
ENSORLG00000016263	rbm8a	90	94.937	ENSMZEG00005016453	rbm8a	90	94.937	Maylandia_zebra
ENSORLG00000016263	rbm8a	86	89.404	ENSMAUG00000016783	-	99	83.333	Mesocricetus_auratus
ENSORLG00000016263	rbm8a	91	72.500	ENSMICG00000037163	-	97	72.611	Microcebus_murinus
ENSORLG00000016263	rbm8a	86	89.404	ENSMICG00000031698	-	91	89.241	Microcebus_murinus
ENSORLG00000016263	rbm8a	86	89.404	ENSMOCG00000017782	-	91	89.241	Microtus_ochrogaster
ENSORLG00000016263	rbm8a	91	81.875	ENSMMOG00000017179	rbm8a	93	81.646	Mola_mola
ENSORLG00000016263	rbm8a	86	88.742	ENSMODG00000018752	RBM8A	91	88.608	Monodelphis_domestica
ENSORLG00000016263	rbm8a	90	92.405	ENSMALG00000010145	rbm8a	90	92.405	Monopterus_albus
ENSORLG00000016263	rbm8a	86	89.404	MGP_CAROLIEiJ_G0025383	Rbm8a	99	82.840	Mus_caroli
ENSORLG00000016263	rbm8a	86	87.417	MGP_CAROLIEiJ_G0014951	Rbm8a2	91	87.342	Mus_caroli
ENSORLG00000016263	rbm8a	86	88.079	ENSMUSG00000078184	Rbm8a2	91	87.975	Mus_musculus
ENSORLG00000016263	rbm8a	86	89.404	ENSMUSG00000038374	Rbm8a	99	82.840	Mus_musculus
ENSORLG00000016263	rbm8a	86	89.404	MGP_PahariEiJ_G0026828	-	99	82.840	Mus_pahari
ENSORLG00000016263	rbm8a	86	89.404	MGP_SPRETEiJ_G0026330	Rbm8a	99	82.840	Mus_spretus
ENSORLG00000016263	rbm8a	86	89.404	ENSMPUG00000000775	RBM8A	91	89.241	Mustela_putorius_furo
ENSORLG00000016263	rbm8a	86	82.781	ENSMLUG00000022711	-	90	82.911	Myotis_lucifugus
ENSORLG00000016263	rbm8a	86	89.404	ENSMLUG00000017436	-	91	89.241	Myotis_lucifugus
ENSORLG00000016263	rbm8a	89	89.677	ENSNGAG00000016038	-	91	89.241	Nannospalax_galili
ENSORLG00000016263	rbm8a	90	94.937	ENSNBRG00000004541	rbm8a	90	94.937	Neolamprologus_brichardi
ENSORLG00000016263	rbm8a	86	89.404	ENSNLEG00000029632	RBM8A	91	89.241	Nomascus_leucogenys
ENSORLG00000016263	rbm8a	62	88.889	ENSMEUG00000016058	RBM8A	88	88.696	Notamacropus_eugenii
ENSORLG00000016263	rbm8a	65	89.474	ENSOPRG00000013316	RBM8A	100	89.474	Ochotona_princeps
ENSORLG00000016263	rbm8a	86	78.146	ENSODEG00000008563	-	90	78.481	Octodon_degus
ENSORLG00000016263	rbm8a	86	89.404	ENSODEG00000000114	-	91	89.241	Octodon_degus
ENSORLG00000016263	rbm8a	86	75.497	ENSODEG00000002094	-	90	75.949	Octodon_degus
ENSORLG00000016263	rbm8a	90	94.937	ENSONIG00000008608	rbm8a	90	94.937	Oreochromis_niloticus
ENSORLG00000016263	rbm8a	86	87.662	ENSOCUG00000025693	RBM8A	91	87.578	Oryctolagus_cuniculus
ENSORLG00000016263	rbm8a	100	100.000	ENSORLG00020012904	rbm8a	92	100.000	Oryzias_latipes_hni
ENSORLG00000016263	rbm8a	100	100.000	ENSORLG00015018824	rbm8a	100	100.000	Oryzias_latipes_hsok
ENSORLG00000016263	rbm8a	100	99.429	ENSOMEG00000021533	rbm8a	78	99.429	Oryzias_melastigma
ENSORLG00000016263	rbm8a	86	87.662	ENSOGAG00000000202	RBM8A	91	87.578	Otolemur_garnettii
ENSORLG00000016263	rbm8a	86	88.742	ENSOARG00000020634	RBM8A	91	88.608	Ovis_aries
ENSORLG00000016263	rbm8a	86	89.404	ENSPPAG00000029116	RBM8A	91	89.241	Pan_paniscus
ENSORLG00000016263	rbm8a	86	89.404	ENSPPRG00000008243	RBM8A	91	89.241	Panthera_pardus
ENSORLG00000016263	rbm8a	86	89.404	ENSPTIG00000009472	RBM8A	91	89.241	Panthera_tigris_altaica
ENSORLG00000016263	rbm8a	86	89.404	ENSPTRG00000001201	RBM8A	91	89.241	Pan_troglodytes
ENSORLG00000016263	rbm8a	86	89.404	ENSPANG00000020584	RBM8A	91	89.241	Papio_anubis
ENSORLG00000016263	rbm8a	90	92.357	ENSPKIG00000009551	rbm8a	67	91.772	Paramormyrops_kingsleyae
ENSORLG00000016263	rbm8a	89	90.968	ENSPKIG00000020558	rbm8a	91	90.506	Paramormyrops_kingsleyae
ENSORLG00000016263	rbm8a	90	95.570	ENSPMGG00000010122	rbm8a	90	95.570	Periophthalmus_magnuspinnatus
ENSORLG00000016263	rbm8a	86	89.404	ENSPEMG00000018117	-	91	89.241	Peromyscus_maniculatus_bairdii
ENSORLG00000016263	rbm8a	86	88.742	ENSPCIG00000011931	RBM8A	91	88.608	Phascolarctos_cinereus
ENSORLG00000016263	rbm8a	90	95.570	ENSPFOG00000010695	rbm8a	90	95.570	Poecilia_formosa
ENSORLG00000016263	rbm8a	90	95.570	ENSPLAG00000009183	rbm8a	90	95.570	Poecilia_latipinna
ENSORLG00000016263	rbm8a	90	95.570	ENSPMEG00000013950	rbm8a	90	95.570	Poecilia_mexicana
ENSORLG00000016263	rbm8a	91	95.000	ENSPREG00000017572	rbm8a	99	94.937	Poecilia_reticulata
ENSORLG00000016263	rbm8a	86	89.404	ENSPPYG00000000929	RBM8A	91	89.241	Pongo_abelii
ENSORLG00000016263	rbm8a	89	89.032	ENSPCAG00000002146	-	91	88.608	Procavia_capensis
ENSORLG00000016263	rbm8a	86	89.404	ENSPCOG00000022886	RBM8A	91	89.241	Propithecus_coquereli
ENSORLG00000016263	rbm8a	86	89.404	ENSPVAG00000014471	RBM8A	91	89.241	Pteropus_vampyrus
ENSORLG00000016263	rbm8a	90	94.937	ENSPNYG00000013564	rbm8a	90	94.937	Pundamilia_nyererei
ENSORLG00000016263	rbm8a	89	94.839	ENSPNAG00000028502	rbm8a	91	94.304	Pygocentrus_nattereri
ENSORLG00000016263	rbm8a	86	89.404	ENSRNOG00000021215	Rbm8a	91	89.241	Rattus_norvegicus
ENSORLG00000016263	rbm8a	86	89.404	ENSRBIG00000039233	RBM8A	91	89.241	Rhinopithecus_bieti
ENSORLG00000016263	rbm8a	86	84.768	ENSRROG00000033023	-	91	84.177	Rhinopithecus_roxellana
ENSORLG00000016263	rbm8a	86	89.404	ENSRROG00000040324	-	91	89.241	Rhinopithecus_roxellana
ENSORLG00000016263	rbm8a	86	89.404	ENSSBOG00000031316	RBM8A	91	89.241	Saimiri_boliviensis_boliviensis
ENSORLG00000016263	rbm8a	86	88.742	ENSSHAG00000018629	RBM8A	91	88.608	Sarcophilus_harrisii
ENSORLG00000016263	rbm8a	89	94.194	ENSSFOG00015009007	rbm8a	91	93.671	Scleropages_formosus
ENSORLG00000016263	rbm8a	89	92.903	ENSSFOG00015024171	rbm8a	91	92.405	Scleropages_formosus
ENSORLG00000016263	rbm8a	90	95.570	ENSSMAG00000012998	rbm8a	90	95.570	Scophthalmus_maximus
ENSORLG00000016263	rbm8a	90	95.570	ENSSDUG00000005911	rbm8a	90	95.570	Seriola_dumerili
ENSORLG00000016263	rbm8a	90	95.570	ENSSLDG00000011664	rbm8a	90	95.570	Seriola_lalandi_dorsalis
ENSORLG00000016263	rbm8a	86	89.404	ENSSARG00000013289	RBM8A	91	89.241	Sorex_araneus
ENSORLG00000016263	rbm8a	86	90.066	ENSSPUG00000001576	RBM8A	91	89.873	Sphenodon_punctatus
ENSORLG00000016263	rbm8a	90	95.570	ENSSPAG00000012181	rbm8a	90	95.570	Stegastes_partitus
ENSORLG00000016263	rbm8a	86	89.404	ENSSSCG00000028509	RBM8A	91	89.241	Sus_scrofa
ENSORLG00000016263	rbm8a	86	88.079	ENSTGUG00000004447	RBM8A	91	87.975	Taeniopygia_guttata
ENSORLG00000016263	rbm8a	90	93.038	ENSTRUG00000013173	rbm8a	90	93.038	Takifugu_rubripes
ENSORLG00000016263	rbm8a	90	91.772	ENSTNIG00000006869	rbm8a	90	91.772	Tetraodon_nigroviridis
ENSORLG00000016263	rbm8a	65	89.474	ENSTBEG00000014947	RBM8A	100	89.474	Tupaia_belangeri
ENSORLG00000016263	rbm8a	73	88.281	ENSTTRG00000009081	RBM8A	89	88.148	Tursiops_truncatus
ENSORLG00000016263	rbm8a	86	89.404	ENSUAMG00000021929	RBM8A	91	89.241	Ursus_americanus
ENSORLG00000016263	rbm8a	86	89.404	ENSUMAG00000010298	RBM8A	91	89.241	Ursus_maritimus
ENSORLG00000016263	rbm8a	86	89.404	ENSVVUG00000007486	RBM8A	91	89.241	Vulpes_vulpes
ENSORLG00000016263	rbm8a	90	94.937	ENSXCOG00000004369	rbm8a	90	94.937	Xiphophorus_couchianus
ENSORLG00000016263	rbm8a	90	94.937	ENSXMAG00000013463	rbm8a	99	93.671	Xiphophorus_maculatus