EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000016406 (Gene tree)
Gene ID: 101166476
Gene Symbol: farsa
Alias: -
Full Name: phenylalanyl-tRNA synthetase subunit alpha
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 13925 bases
Position: chr8:22198563-22212487
Accession: 101166476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000020543	tRNA-synt_2d	PF01409.20	1.2e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000020544	-	2990	XM_004071843	ENSORLP00000020543	550 (aa)	XP_004071891	H2MP85
ENSORLT00000030584	-	708	-	ENSORLP00000027574	235 (aa)	-	-

Gene Model

Click here to download ENSORLG00000016406's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000016406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000016406	farsa	90	76.258	ENSG00000179115	FARSA	99	78.144	Homo_sapiens
ENSORLG00000016406	farsa	90	91.348	ENSAPOG00000011465	farsa	100	91.348	Acanthochromis_polyacanthus
ENSORLG00000016406	farsa	90	76.660	ENSAMEG00000012446	FARSA	98	76.660	Ailuropoda_melanoleuca
ENSORLG00000016406	farsa	90	86.318	ENSACIG00000020499	farsa	100	86.318	Amphilophus_citrinellus
ENSORLG00000016406	farsa	90	91.751	ENSAOCG00000000581	farsa	100	91.751	Amphiprion_ocellaris
ENSORLG00000016406	farsa	90	91.549	ENSAPEG00000017695	farsa	100	91.549	Amphiprion_percula
ENSORLG00000016406	farsa	90	76.908	ENSATEG00000012633	farsa	100	76.908	Anabas_testudineus
ENSORLG00000016406	farsa	90	82.222	ENSATEG00000012807	farsa	100	82.222	Anabas_testudineus
ENSORLG00000016406	farsa	90	77.137	ENSACAG00000017166	FARSA	85	77.137	Anolis_carolinensis
ENSORLG00000016406	farsa	90	75.453	ENSANAG00000037420	FARSA	98	75.453	Aotus_nancymaae
ENSORLG00000016406	farsa	90	91.147	ENSACLG00000001716	farsa	100	91.147	Astatotilapia_calliptera
ENSORLG00000016406	farsa	90	86.720	ENSAMXG00000037912	farsa	100	86.720	Astyanax_mexicanus
ENSORLG00000016406	farsa	90	75.654	ENSBTAG00000021374	FARSA	98	75.654	Bos_taurus
ENSORLG00000016406	farsa	93	59.454	WBGene00001497	fars-1	94	62.658	Caenorhabditis_elegans
ENSORLG00000016406	farsa	91	74.600	ENSCJAG00000004686	FARSA	98	71.630	Callithrix_jacchus
ENSORLG00000016406	farsa	90	76.459	ENSCAFG00000017096	FARSA	98	76.459	Canis_familiaris
ENSORLG00000016406	farsa	90	76.459	ENSCAFG00020005315	FARSA	98	76.459	Canis_lupus_dingo
ENSORLG00000016406	farsa	90	71.543	ENSCHIG00000022617	FARSA	98	71.543	Capra_hircus
ENSORLG00000016406	farsa	83	73.581	ENSTSYG00000002595	FARSA	83	73.581	Carlito_syrichta
ENSORLG00000016406	farsa	81	76.786	ENSCAPG00000011353	FARSA	95	76.786	Cavia_aperea
ENSORLG00000016406	farsa	90	75.050	ENSCPOG00000000787	FARSA	98	75.050	Cavia_porcellus
ENSORLG00000016406	farsa	91	74.400	ENSCCAG00000028176	FARSA	98	75.252	Cebus_capucinus
ENSORLG00000016406	farsa	90	75.403	ENSCLAG00000015489	FARSA	98	75.403	Chinchilla_lanigera
ENSORLG00000016406	farsa	84	77.682	ENSCSAG00000006530	FARSA	98	77.682	Chlorocebus_sabaeus
ENSORLG00000016406	farsa	87	81.211	ENSCPBG00000023915	FARSA	99	79.482	Chrysemys_picta_bellii
ENSORLG00000016406	farsa	89	67.143	ENSCING00000002567	-	98	67.143	Ciona_intestinalis
ENSORLG00000016406	farsa	89	68.367	ENSCSAVG00000010683	-	97	68.367	Ciona_savignyi
ENSORLG00000016406	farsa	90	75.855	ENSCANG00000043649	-	98	75.855	Colobus_angolensis_palliatus
ENSORLG00000016406	farsa	90	76.258	ENSCGRG00001019769	Farsa	98	76.258	Cricetulus_griseus_chok1gshd
ENSORLG00000016406	farsa	90	76.258	ENSCGRG00000013415	Farsa	98	76.258	Cricetulus_griseus_crigri
ENSORLG00000016406	farsa	90	89.940	ENSCSEG00000016214	farsa	96	89.940	Cynoglossus_semilaevis
ENSORLG00000016406	farsa	90	89.537	ENSCVAG00000007907	farsa	100	89.537	Cyprinodon_variegatus
ENSORLG00000016406	farsa	90	87.928	ENSDARG00000098825	farsa	100	87.928	Danio_rerio
ENSORLG00000016406	farsa	86	77.311	ENSDNOG00000032350	FARSA	98	77.311	Dasypus_novemcinctus
ENSORLG00000016406	farsa	90	75.403	ENSDORG00000010118	Farsa	98	75.403	Dipodomys_ordii
ENSORLG00000016406	farsa	89	66.870	FBgn0030007	alpha-PheRS	98	66.870	Drosophila_melanogaster
ENSORLG00000016406	farsa	90	68.813	ENSETEG00000018673	FARSA	98	68.813	Echinops_telfairi
ENSORLG00000016406	farsa	53	67.568	ENSEBUG00000008545	farsa	99	67.568	Eptatretus_burgeri
ENSORLG00000016406	farsa	84	64.906	ENSEASG00005004093	FARSA	98	63.504	Equus_asinus_asinus
ENSORLG00000016406	farsa	90	75.654	ENSECAG00000015139	FARSA	96	73.786	Equus_caballus
ENSORLG00000016406	farsa	90	88.531	ENSELUG00000010183	farsa	100	88.531	Esox_lucius
ENSORLG00000016406	farsa	90	75.855	ENSFCAG00000023511	FARSA	98	75.855	Felis_catus
ENSORLG00000016406	farsa	90	75.403	ENSFDAG00000005987	FARSA	98	75.403	Fukomys_damarensis
ENSORLG00000016406	farsa	91	91.816	ENSFHEG00000009382	farsa	95	91.816	Fundulus_heteroclitus
ENSORLG00000016406	farsa	90	83.501	ENSGMOG00000018319	farsa	100	84.909	Gadus_morhua
ENSORLG00000016406	farsa	92	70.817	ENSGALG00000040258	FARSA	90	70.817	Gallus_gallus
ENSORLG00000016406	farsa	90	91.751	ENSGAFG00000014146	farsa	100	91.751	Gambusia_affinis
ENSORLG00000016406	farsa	90	89.157	ENSGACG00000006278	farsa	100	89.157	Gasterosteus_aculeatus
ENSORLG00000016406	farsa	90	79.681	ENSGAGG00000000753	FARSA	99	79.681	Gopherus_agassizii
ENSORLG00000016406	farsa	90	76.258	ENSGGOG00000003418	FARSA	98	76.258	Gorilla_gorilla
ENSORLG00000016406	farsa	90	91.147	ENSHBUG00000019852	farsa	100	91.147	Haplochromis_burtoni
ENSORLG00000016406	farsa	90	75.000	ENSHGLG00000005213	FARSA	98	75.000	Heterocephalus_glaber_female
ENSORLG00000016406	farsa	90	75.202	ENSHGLG00100009586	FARSA	98	75.202	Heterocephalus_glaber_male
ENSORLG00000016406	farsa	90	89.537	ENSHCOG00000019548	farsa	100	89.537	Hippocampus_comes
ENSORLG00000016406	farsa	90	88.934	ENSIPUG00000007635	farsa	100	88.934	Ictalurus_punctatus
ENSORLG00000016406	farsa	90	75.252	ENSSTOG00000008748	FARSA	98	75.252	Ictidomys_tridecemlineatus
ENSORLG00000016406	farsa	90	88.732	ENSKMAG00000010698	farsa	100	88.732	Kryptolebias_marmoratus
ENSORLG00000016406	farsa	90	90.342	ENSLBEG00000006757	-	100	90.342	Labrus_bergylta
ENSORLG00000016406	farsa	77	89.176	ENSLBEG00000001258	farsa	97	89.176	Labrus_bergylta
ENSORLG00000016406	farsa	85	84.076	ENSLOCG00000008389	farsa	98	84.076	Lepisosteus_oculatus
ENSORLG00000016406	farsa	90	76.056	ENSLAFG00000016154	FARSA	98	76.056	Loxodonta_africana
ENSORLG00000016406	farsa	90	75.654	ENSMFAG00000030595	FARSA	98	75.654	Macaca_fascicularis
ENSORLG00000016406	farsa	90	75.654	ENSMMUG00000004390	FARSA	98	75.654	Macaca_mulatta
ENSORLG00000016406	farsa	90	75.654	ENSMNEG00000043866	FARSA	98	75.654	Macaca_nemestrina
ENSORLG00000016406	farsa	90	75.502	ENSMLEG00000029157	FARSA	98	75.502	Mandrillus_leucophaeus
ENSORLG00000016406	farsa	90	89.940	ENSMAMG00000010636	farsa	100	89.940	Mastacembelus_armatus
ENSORLG00000016406	farsa	90	91.147	ENSMZEG00005002319	farsa	100	91.147	Maylandia_zebra
ENSORLG00000016406	farsa	90	76.861	ENSMAUG00000009188	Farsa	98	76.861	Mesocricetus_auratus
ENSORLG00000016406	farsa	90	75.654	ENSMICG00000016272	FARSA	98	75.654	Microcebus_murinus
ENSORLG00000016406	farsa	90	76.411	ENSMOCG00000011399	Farsa	98	76.411	Microtus_ochrogaster
ENSORLG00000016406	farsa	90	85.312	ENSMMOG00000006287	farsa	100	85.312	Mola_mola
ENSORLG00000016406	farsa	90	76.815	ENSMODG00000011519	FARSA	100	76.815	Monodelphis_domestica
ENSORLG00000016406	farsa	90	86.922	ENSMALG00000001972	farsa	100	86.922	Monopterus_albus
ENSORLG00000016406	farsa	90	76.613	MGP_CAROLIEiJ_G0031312	Farsa	98	76.613	Mus_caroli
ENSORLG00000016406	farsa	90	76.411	ENSMUSG00000003808	Farsa	98	76.411	Mus_musculus
ENSORLG00000016406	farsa	90	76.210	MGP_PahariEiJ_G0022917	Farsa	98	76.210	Mus_pahari
ENSORLG00000016406	farsa	90	76.613	MGP_SPRETEiJ_G0032431	Farsa	98	76.613	Mus_spretus
ENSORLG00000016406	farsa	90	76.459	ENSMPUG00000004400	FARSA	98	76.459	Mustela_putorius_furo
ENSORLG00000016406	farsa	90	76.056	ENSMLUG00000012767	FARSA	98	76.056	Myotis_lucifugus
ENSORLG00000016406	farsa	67	77.236	ENSNGAG00000018353	Farsa	100	77.236	Nannospalax_galili
ENSORLG00000016406	farsa	90	90.543	ENSNBRG00000010063	farsa	100	90.543	Neolamprologus_brichardi
ENSORLG00000016406	farsa	95	71.617	ENSNLEG00000012899	FARSA	98	75.855	Nomascus_leucogenys
ENSORLG00000016406	farsa	90	76.660	ENSMEUG00000014253	FARSA	100	76.660	Notamacropus_eugenii
ENSORLG00000016406	farsa	90	75.453	ENSOPRG00000005004	FARSA	98	75.453	Ochotona_princeps
ENSORLG00000016406	farsa	90	75.654	ENSODEG00000010433	FARSA	98	75.654	Octodon_degus
ENSORLG00000016406	farsa	90	91.147	ENSONIG00000008075	farsa	100	91.147	Oreochromis_niloticus
ENSORLG00000016406	farsa	90	99.798	ENSORLG00020021978	farsa	100	99.798	Oryzias_latipes_hni
ENSORLG00000016406	farsa	90	99.596	ENSORLG00015015045	farsa	100	99.596	Oryzias_latipes_hsok
ENSORLG00000016406	farsa	98	91.280	ENSOMEG00000017367	farsa	99	95.635	Oryzias_melastigma
ENSORLG00000016406	farsa	90	76.258	ENSOGAG00000012243	FARSA	98	76.258	Otolemur_garnettii
ENSORLG00000016406	farsa	90	75.855	ENSOARG00000009991	FARSA	92	75.855	Ovis_aries
ENSORLG00000016406	farsa	90	76.056	ENSPPAG00000034266	FARSA	98	76.056	Pan_paniscus
ENSORLG00000016406	farsa	90	75.855	ENSPPRG00000000346	FARSA	98	75.855	Panthera_pardus
ENSORLG00000016406	farsa	83	78.214	ENSPTIG00000011502	FARSA	94	78.214	Panthera_tigris_altaica
ENSORLG00000016406	farsa	90	76.056	ENSPTRG00000010550	FARSA	98	76.056	Pan_troglodytes
ENSORLG00000016406	farsa	90	75.453	ENSPANG00000010978	FARSA	98	71.630	Papio_anubis
ENSORLG00000016406	farsa	90	87.903	ENSPKIG00000007170	farsa	100	87.903	Paramormyrops_kingsleyae
ENSORLG00000016406	farsa	81	77.009	ENSPSIG00000012701	FARSA	97	77.009	Pelodiscus_sinensis
ENSORLG00000016406	farsa	90	83.501	ENSPMGG00000001401	farsa	100	83.501	Periophthalmus_magnuspinnatus
ENSORLG00000016406	farsa	90	75.855	ENSPEMG00000012560	Farsa	98	75.855	Peromyscus_maniculatus_bairdii
ENSORLG00000016406	farsa	90	78.873	ENSPMAG00000008453	farsa	100	78.873	Petromyzon_marinus
ENSORLG00000016406	farsa	90	76.861	ENSPCIG00000019294	FARSA	100	76.861	Phascolarctos_cinereus
ENSORLG00000016406	farsa	90	91.549	ENSPFOG00000001201	farsa	100	91.549	Poecilia_formosa
ENSORLG00000016406	farsa	90	91.549	ENSPLAG00000018191	farsa	100	91.549	Poecilia_latipinna
ENSORLG00000016406	farsa	90	91.751	ENSPMEG00000013547	farsa	100	91.751	Poecilia_mexicana
ENSORLG00000016406	farsa	90	86.318	ENSPREG00000013620	farsa	100	86.318	Poecilia_reticulata
ENSORLG00000016406	farsa	90	75.855	ENSPPYG00000009615	FARSA	98	75.855	Pongo_abelii
ENSORLG00000016406	farsa	90	75.855	ENSPCAG00000015721	FARSA	98	75.855	Procavia_capensis
ENSORLG00000016406	farsa	90	75.855	ENSPCOG00000014412	FARSA	98	75.855	Propithecus_coquereli
ENSORLG00000016406	farsa	77	85.648	ENSPVAG00000014714	FARSA	84	85.648	Pteropus_vampyrus
ENSORLG00000016406	farsa	90	91.147	ENSPNYG00000002144	farsa	100	91.147	Pundamilia_nyererei
ENSORLG00000016406	farsa	90	87.928	ENSPNAG00000000869	farsa	100	87.928	Pygocentrus_nattereri
ENSORLG00000016406	farsa	90	76.411	ENSRNOG00000003149	Farsa	98	76.411	Rattus_norvegicus
ENSORLG00000016406	farsa	90	75.453	ENSRBIG00000025585	FARSA	96	77.778	Rhinopithecus_bieti
ENSORLG00000016406	farsa	90	75.453	ENSRROG00000040046	FARSA	98	71.630	Rhinopithecus_roxellana
ENSORLG00000016406	farsa	84	50.424	YFL022C	FRS2	93	50.424	Saccharomyces_cerevisiae
ENSORLG00000016406	farsa	90	75.453	ENSSBOG00000031362	FARSA	98	75.453	Saimiri_boliviensis_boliviensis
ENSORLG00000016406	farsa	81	78.523	ENSSHAG00000015006	FARSA	100	78.523	Sarcophilus_harrisii
ENSORLG00000016406	farsa	90	85.312	ENSSFOG00015014864	farsa	100	85.312	Scleropages_formosus
ENSORLG00000016406	farsa	90	89.738	ENSSMAG00000002358	farsa	100	89.738	Scophthalmus_maximus
ENSORLG00000016406	farsa	90	90.744	ENSSDUG00000008631	farsa	100	90.744	Seriola_dumerili
ENSORLG00000016406	farsa	90	89.940	ENSSLDG00000017108	farsa	100	89.940	Seriola_lalandi_dorsalis
ENSORLG00000016406	farsa	60	97.059	ENSSARG00000006579	-	68	97.059	Sorex_araneus
ENSORLG00000016406	farsa	81	68.889	ENSSPUG00000012509	FARSA	98	68.490	Sphenodon_punctatus
ENSORLG00000016406	farsa	90	91.348	ENSSPAG00000018292	farsa	92	91.348	Stegastes_partitus
ENSORLG00000016406	farsa	90	75.453	ENSSSCG00000013745	FARSA	98	75.453	Sus_scrofa
ENSORLG00000016406	farsa	90	77.264	ENSTRUG00000010624	farsa	100	77.264	Takifugu_rubripes
ENSORLG00000016406	farsa	90	81.891	ENSTNIG00000008330	farsa	100	81.891	Tetraodon_nigroviridis
ENSORLG00000016406	farsa	81	74.439	ENSTBEG00000000396	FARSA	98	74.439	Tupaia_belangeri
ENSORLG00000016406	farsa	78	94.118	ENSTTRG00000003599	FARSA	85	94.118	Tursiops_truncatus
ENSORLG00000016406	farsa	90	76.660	ENSUAMG00000010230	FARSA	98	76.660	Ursus_americanus
ENSORLG00000016406	farsa	90	76.660	ENSUMAG00000006110	FARSA	98	76.660	Ursus_maritimus
ENSORLG00000016406	farsa	90	76.459	ENSVVUG00000024145	FARSA	98	76.459	Vulpes_vulpes
ENSORLG00000016406	farsa	90	78.313	ENSXETG00000007936	farsa	100	78.313	Xenopus_tropicalis
ENSORLG00000016406	farsa	90	81.727	ENSXCOG00000015512	farsa	100	81.727	Xiphophorus_couchianus
ENSORLG00000016406	farsa	90	90.543	ENSXMAG00000008832	farsa	100	90.543	Xiphophorus_maculatus