EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000016559 (Gene tree)
Gene ID: 101164692
Gene Symbol: hbs1l
Alias: -
Full Name: HBS1 like translational GTPase
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 22618 bases
Position: chr24:14274660-14297277
Accession: 101164692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000020730	GTP_EFTU	PF00009.27	3.4e-47	1	1
ENSORLP00000032697	GTP_EFTU	PF00009.27	8.3e-28	1	1
ENSORLP00000032697	GTP_EFTU_D2	PF03144.25	1.7e-07	1	1
ENSORLP00000020730	GTP_EFTU_D2	PF03144.25	1.9e-07	1	1
ENSORLP00000032697	GTP_EFTU_D3	PF03143.17	8.7e-28	1	1
ENSORLP00000020730	GTP_EFTU_D3	PF03143.17	1.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000020731	-	3437	XM_023952837	ENSORLP00000020730	701 (aa)	XP_023808605	H2MPR7
ENSORLT00000032352	-	3290	-	ENSORLP00000032697	652 (aa)	-	-

Gene Model

Click here to download ENSORLG00000016559's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000016559's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000016559	hbs1l	60	40.000	ENSORLG00000002867	-	72	39.953
ENSORLG00000016559	hbs1l	61	39.863	ENSORLG00000007585	-	95	39.863
ENSORLG00000016559	hbs1l	61	37.071	ENSORLG00000002258	EEF1A1	63	37.071
ENSORLG00000016559	hbs1l	61	41.190	ENSORLG00000007614	eef1a	95	41.190
ENSORLG00000016559	hbs1l	61	37.528	ENSORLG00000019066	si:dkey-37o8.1	96	37.528
ENSORLG00000016559	hbs1l	61	39.720	ENSORLG00000026597	gspt1l	76	39.720

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000016559	hbs1l	100	70.763	ENSG00000112339	HBS1L	95	85.714	Homo_sapiens
ENSORLG00000016559	hbs1l	93	71.933	ENSAPOG00000013169	hbs1l	97	71.472	Acanthochromis_polyacanthus
ENSORLG00000016559	hbs1l	99	70.381	ENSAMEG00000009749	HBS1L	99	69.774	Ailuropoda_melanoleuca
ENSORLG00000016559	hbs1l	77	87.337	ENSACIG00000017087	hbs1l	91	87.337	Amphilophus_citrinellus
ENSORLG00000016559	hbs1l	100	84.068	ENSAPEG00000008320	hbs1l	100	84.068	Amphiprion_percula
ENSORLG00000016559	hbs1l	100	83.949	ENSATEG00000004459	hbs1l	100	83.949	Anabas_testudineus
ENSORLG00000016559	hbs1l	98	67.806	ENSAPLG00000007791	HBS1L	100	68.058	Anas_platyrhynchos
ENSORLG00000016559	hbs1l	100	70.056	ENSACAG00000010120	HBS1L	100	70.056	Anolis_carolinensis
ENSORLG00000016559	hbs1l	100	70.538	ENSANAG00000038076	HBS1L	96	77.190	Aotus_nancymaae
ENSORLG00000016559	hbs1l	100	84.211	ENSACLG00000010469	hbs1l	100	84.211	Astatotilapia_calliptera
ENSORLG00000016559	hbs1l	100	75.710	ENSAMXG00000004260	hbs1l	97	82.090	Astyanax_mexicanus
ENSORLG00000016559	hbs1l	100	70.538	ENSBTAG00000020174	HBS1L	100	70.014	Bos_taurus
ENSORLG00000016559	hbs1l	73	42.202	WBGene00010622	K07A12.4	84	44.444	Caenorhabditis_elegans
ENSORLG00000016559	hbs1l	100	70.538	ENSCJAG00000007678	HBS1L	95	77.148	Callithrix_jacchus
ENSORLG00000016559	hbs1l	100	69.731	ENSCAFG00000000226	HBS1L	100	68.980	Canis_familiaris
ENSORLG00000016559	hbs1l	100	69.731	ENSCAFG00020021904	HBS1L	100	68.980	Canis_lupus_dingo
ENSORLG00000016559	hbs1l	100	70.056	ENSCHIG00000010299	HBS1L	100	69.731	Capra_hircus
ENSORLG00000016559	hbs1l	100	69.405	ENSTSYG00000007089	HBS1L	100	72.148	Carlito_syrichta
ENSORLG00000016559	hbs1l	99	60.882	ENSCPOG00000007015	HBS1L	99	60.597	Cavia_porcellus
ENSORLG00000016559	hbs1l	100	69.405	ENSCCAG00000033863	HBS1L	100	71.799	Cebus_capucinus
ENSORLG00000016559	hbs1l	100	70.323	ENSCATG00000043042	HBS1L	93	76.685	Cercocebus_atys
ENSORLG00000016559	hbs1l	100	69.929	ENSCLAG00000004937	HBS1L	100	69.318	Chinchilla_lanigera
ENSORLG00000016559	hbs1l	100	69.944	ENSCSAG00000016791	HBS1L	100	69.198	Chlorocebus_sabaeus
ENSORLG00000016559	hbs1l	97	55.702	ENSCHOG00000001852	HBS1L	99	54.286	Choloepus_hoffmanni
ENSORLG00000016559	hbs1l	100	70.000	ENSCPBG00000017635	HBS1L	100	69.522	Chrysemys_picta_bellii
ENSORLG00000016559	hbs1l	99	47.885	ENSCING00000005592	-	99	47.340	Ciona_intestinalis
ENSORLG00000016559	hbs1l	99	47.887	ENSCSAVG00000002297	-	99	59.343	Ciona_savignyi
ENSORLG00000016559	hbs1l	100	70.126	ENSCANG00000031208	HBS1L	100	69.437	Colobus_angolensis_palliatus
ENSORLG00000016559	hbs1l	100	71.186	ENSCGRG00001024531	Hbs1l	100	70.438	Cricetulus_griseus_chok1gshd
ENSORLG00000016559	hbs1l	100	71.186	ENSCGRG00000017361	Hbs1l	100	70.438	Cricetulus_griseus_crigri
ENSORLG00000016559	hbs1l	99	82.930	ENSCSEG00000002794	hbs1l	94	83.073	Cynoglossus_semilaevis
ENSORLG00000016559	hbs1l	100	81.054	ENSCVAG00000001462	hbs1l	100	81.054	Cyprinodon_variegatus
ENSORLG00000016559	hbs1l	100	75.779	ENSDARG00000036778	hbs1l	100	75.779	Danio_rerio
ENSORLG00000016559	hbs1l	100	69.757	ENSDORG00000005958	Hbs1l	100	69.757	Dipodomys_ordii
ENSORLG00000016559	hbs1l	99	46.419	FBgn0042712	HBS1	100	46.281	Drosophila_melanogaster
ENSORLG00000016559	hbs1l	100	66.102	ENSETEG00000000913	HBS1L	100	65.347	Echinops_telfairi
ENSORLG00000016559	hbs1l	99	57.265	ENSEBUG00000010759	hbs1l	100	62.097	Eptatretus_burgeri
ENSORLG00000016559	hbs1l	100	68.811	ENSEASG00005011148	HBS1L	100	69.111	Equus_asinus_asinus
ENSORLG00000016559	hbs1l	100	68.811	ENSECAG00000004470	HBS1L	100	68.392	Equus_caballus
ENSORLG00000016559	hbs1l	100	66.948	ENSEEUG00000013582	HBS1L	100	66.384	Erinaceus_europaeus
ENSORLG00000016559	hbs1l	82	74.141	ENSELUG00000006444	hbs1l	95	73.705	Esox_lucius
ENSORLG00000016559	hbs1l	100	70.225	ENSFCAG00000001810	HBS1L	100	78.476	Felis_catus
ENSORLG00000016559	hbs1l	87	71.220	ENSFALG00000011898	HBS1L	100	71.220	Ficedula_albicollis
ENSORLG00000016559	hbs1l	100	70.963	ENSFDAG00000011841	HBS1L	100	70.355	Fukomys_damarensis
ENSORLG00000016559	hbs1l	100	82.906	ENSFHEG00000006942	hbs1l	100	82.906	Fundulus_heteroclitus
ENSORLG00000016559	hbs1l	99	75.960	ENSGMOG00000011843	hbs1l	100	75.960	Gadus_morhua
ENSORLG00000016559	hbs1l	100	80.727	ENSGALG00000013962	HBS1L	88	80.727	Gallus_gallus
ENSORLG00000016559	hbs1l	100	84.615	ENSGAFG00000004157	hbs1l	100	84.615	Gambusia_affinis
ENSORLG00000016559	hbs1l	99	80.627	ENSGACG00000011035	hbs1l	100	80.627	Gasterosteus_aculeatus
ENSORLG00000016559	hbs1l	100	69.774	ENSGAGG00000002033	HBS1L	100	69.633	Gopherus_agassizii
ENSORLG00000016559	hbs1l	78	72.432	ENSGGOG00000034956	-	93	80.645	Gorilla_gorilla
ENSORLG00000016559	hbs1l	100	84.353	ENSHBUG00000013424	hbs1l	100	84.353	Haplochromis_burtoni
ENSORLG00000016559	hbs1l	100	69.844	ENSHGLG00000000516	HBS1L	100	69.844	Heterocephalus_glaber_female
ENSORLG00000016559	hbs1l	100	69.844	ENSHGLG00100003550	HBS1L	100	69.844	Heterocephalus_glaber_male
ENSORLG00000016559	hbs1l	100	80.085	ENSHCOG00000007581	hbs1l	93	80.085	Hippocampus_comes
ENSORLG00000016559	hbs1l	100	75.284	ENSIPUG00000010748	hbs1l	100	75.426	Ictalurus_punctatus
ENSORLG00000016559	hbs1l	100	70.480	ENSSTOG00000007551	HBS1L	100	69.915	Ictidomys_tridecemlineatus
ENSORLG00000016559	hbs1l	100	54.816	ENSJJAG00000012660	-	100	54.468	Jaculus_jaculus
ENSORLG00000016559	hbs1l	99	67.330	ENSJJAG00000017024	-	97	66.999	Jaculus_jaculus
ENSORLG00000016559	hbs1l	100	84.758	ENSKMAG00000012130	hbs1l	100	86.264	Kryptolebias_marmoratus
ENSORLG00000016559	hbs1l	100	84.615	ENSLBEG00000002784	hbs1l	100	84.615	Labrus_bergylta
ENSORLG00000016559	hbs1l	69	75.714	ENSLACG00000004528	HBS1L	99	75.714	Latimeria_chalumnae
ENSORLG00000016559	hbs1l	100	71.893	ENSLOCG00000016221	hbs1l	100	71.893	Lepisosteus_oculatus
ENSORLG00000016559	hbs1l	100	67.560	ENSLAFG00000007835	HBS1L	100	67.560	Loxodonta_africana
ENSORLG00000016559	hbs1l	100	70.963	ENSMFAG00000003766	HBS1L	96	77.697	Macaca_fascicularis
ENSORLG00000016559	hbs1l	89	76.630	ENSMMUG00000004802	HBS1L	96	78.172	Macaca_mulatta
ENSORLG00000016559	hbs1l	100	70.963	ENSMNEG00000043942	HBS1L	96	77.697	Macaca_nemestrina
ENSORLG00000016559	hbs1l	99	70.198	ENSMLEG00000043218	HBS1L	93	76.503	Mandrillus_leucophaeus
ENSORLG00000016559	hbs1l	98	88.202	ENSMAMG00000016498	hbs1l	98	88.202	Mastacembelus_armatus
ENSORLG00000016559	hbs1l	100	84.211	ENSMZEG00005015575	hbs1l	100	84.211	Maylandia_zebra
ENSORLG00000016559	hbs1l	77	87.732	ENSMZEG00005024018	-	90	87.732	Maylandia_zebra
ENSORLG00000016559	hbs1l	99	67.564	ENSMGAG00000013065	HBS1L	99	66.714	Meleagris_gallopavo
ENSORLG00000016559	hbs1l	100	71.246	ENSMAUG00000001077	Hbs1l	100	70.638	Mesocricetus_auratus
ENSORLG00000016559	hbs1l	99	66.999	ENSMICG00000001533	-	91	75.596	Microcebus_murinus
ENSORLG00000016559	hbs1l	100	60.169	ENSMICG00000030043	-	96	79.032	Microcebus_murinus
ENSORLG00000016559	hbs1l	100	70.323	ENSMOCG00000023038	Hbs1l	100	69.718	Microtus_ochrogaster
ENSORLG00000016559	hbs1l	97	84.897	ENSMMOG00000015507	hbs1l	100	84.897	Mola_mola
ENSORLG00000016559	hbs1l	100	70.580	ENSMODG00000017499	HBS1L	100	70.014	Monodelphis_domestica
ENSORLG00000016559	hbs1l	100	85.064	ENSMALG00000010768	hbs1l	100	85.064	Monopterus_albus
ENSORLG00000016559	hbs1l	100	70.745	MGP_CAROLIEiJ_G0015162	Hbs1l	100	70.141	Mus_caroli
ENSORLG00000016559	hbs1l	100	70.605	ENSMUSG00000019977	Hbs1l	100	87.023	Mus_musculus
ENSORLG00000016559	hbs1l	100	70.323	MGP_PahariEiJ_G0023782	Hbs1l	100	70.423	Mus_pahari
ENSORLG00000016559	hbs1l	100	70.745	MGP_SPRETEiJ_G0015970	Hbs1l	100	70.845	Mus_spretus
ENSORLG00000016559	hbs1l	100	69.873	ENSMPUG00000014810	HBS1L	100	69.405	Mustela_putorius_furo
ENSORLG00000016559	hbs1l	100	70.113	ENSMLUG00000010618	HBS1L	100	69.645	Myotis_lucifugus
ENSORLG00000016559	hbs1l	100	69.307	ENSNGAG00000015184	Hbs1l	100	69.078	Nannospalax_galili
ENSORLG00000016559	hbs1l	100	84.211	ENSNBRG00000020095	hbs1l	99	88.082	Neolamprologus_brichardi
ENSORLG00000016559	hbs1l	100	70.000	ENSNLEG00000014721	HBS1L	95	76.557	Nomascus_leucogenys
ENSORLG00000016559	hbs1l	88	79.695	ENSMEUG00000003907	HBS1L	81	79.695	Notamacropus_eugenii
ENSORLG00000016559	hbs1l	72	79.339	ENSOPRG00000013595	HBS1L	70	79.339	Ochotona_princeps
ENSORLG00000016559	hbs1l	99	69.547	ENSODEG00000008959	HBS1L	100	69.452	Octodon_degus
ENSORLG00000016559	hbs1l	100	84.068	ENSONIG00000000460	hbs1l	100	83.593	Oreochromis_niloticus
ENSORLG00000016559	hbs1l	99	69.830	ENSOANG00000002684	-	99	69.405	Ornithorhynchus_anatinus
ENSORLG00000016559	hbs1l	100	66.667	ENSOCUG00000011619	HBS1L	99	67.675	Oryctolagus_cuniculus
ENSORLG00000016559	hbs1l	100	99.430	ENSORLG00020003827	hbs1l	100	99.430	Oryzias_latipes_hni
ENSORLG00000016559	hbs1l	100	99.430	ENSORLG00015023105	hbs1l	100	99.430	Oryzias_latipes_hsok
ENSORLG00000016559	hbs1l	100	95.726	ENSOMEG00000016715	hbs1l	100	95.726	Oryzias_melastigma
ENSORLG00000016559	hbs1l	100	69.761	ENSOGAG00000012604	HBS1L	100	69.014	Otolemur_garnettii
ENSORLG00000016559	hbs1l	100	70.056	ENSOARG00000005671	-	100	69.590	Ovis_aries
ENSORLG00000016559	hbs1l	99	70.397	ENSOARG00000014798	-	99	69.929	Ovis_aries
ENSORLG00000016559	hbs1l	100	70.904	ENSPPAG00000029900	HBS1L	93	77.473	Pan_paniscus
ENSORLG00000016559	hbs1l	100	70.225	ENSPPRG00000005285	HBS1L	96	76.951	Panthera_pardus
ENSORLG00000016559	hbs1l	100	70.225	ENSPTIG00000015803	HBS1L	96	76.951	Panthera_tigris_altaica
ENSORLG00000016559	hbs1l	100	70.904	ENSPTRG00000018630	HBS1L	93	77.473	Pan_troglodytes
ENSORLG00000016559	hbs1l	100	70.323	ENSPANG00000007075	HBS1L	93	76.685	Papio_anubis
ENSORLG00000016559	hbs1l	97	79.174	ENSPKIG00000023171	hbs1l	97	79.174	Paramormyrops_kingsleyae
ENSORLG00000016559	hbs1l	86	68.241	ENSPSIG00000016467	HBS1L	97	67.590	Pelodiscus_sinensis
ENSORLG00000016559	hbs1l	99	78.684	ENSPMGG00000018051	hbs1l	96	86.702	Periophthalmus_magnuspinnatus
ENSORLG00000016559	hbs1l	100	70.621	ENSPEMG00000014369	Hbs1l	100	70.014	Peromyscus_maniculatus_bairdii
ENSORLG00000016559	hbs1l	100	62.341	ENSPMAG00000002516	hbs1l	100	61.528	Petromyzon_marinus
ENSORLG00000016559	hbs1l	100	84.375	ENSPFOG00000021764	hbs1l	100	84.375	Poecilia_formosa
ENSORLG00000016559	hbs1l	100	84.615	ENSPLAG00000006193	hbs1l	100	84.615	Poecilia_latipinna
ENSORLG00000016559	hbs1l	100	84.758	ENSPMEG00000000925	hbs1l	100	84.758	Poecilia_mexicana
ENSORLG00000016559	hbs1l	100	83.903	ENSPREG00000011270	hbs1l	100	83.903	Poecilia_reticulata
ENSORLG00000016559	hbs1l	100	70.198	ENSPPYG00000017027	HBS1L	100	69.448	Pongo_abelii
ENSORLG00000016559	hbs1l	75	77.966	ENSPCAG00000007002	HBS1L	77	77.966	Procavia_capensis
ENSORLG00000016559	hbs1l	81	76.236	ENSPVAG00000015229	HBS1L	84	76.038	Pteropus_vampyrus
ENSORLG00000016559	hbs1l	100	84.068	ENSPNYG00000013360	hbs1l	100	84.068	Pundamilia_nyererei
ENSORLG00000016559	hbs1l	100	75.994	ENSPNAG00000026721	hbs1l	100	75.994	Pygocentrus_nattereri
ENSORLG00000016559	hbs1l	100	70.198	ENSRNOG00000014531	Hbs1l	100	70.297	Rattus_norvegicus
ENSORLG00000016559	hbs1l	100	70.126	ENSRBIG00000004484	HBS1L	100	69.437	Rhinopithecus_bieti
ENSORLG00000016559	hbs1l	100	69.986	ENSRROG00000026176	HBS1L	93	76.685	Rhinopithecus_roxellana
ENSORLG00000016559	hbs1l	60	38.926	YKR084C	-	73	38.926	Saccharomyces_cerevisiae
ENSORLG00000016559	hbs1l	100	62.890	ENSSBOG00000016930	-	98	76.596	Saimiri_boliviensis_boliviensis
ENSORLG00000016559	hbs1l	100	70.822	ENSSBOG00000019696	-	93	79.135	Saimiri_boliviensis_boliviensis
ENSORLG00000016559	hbs1l	100	70.099	ENSSHAG00000013509	HBS1L	100	69.676	Sarcophilus_harrisii
ENSORLG00000016559	hbs1l	99	72.650	ENSSFOG00015017544	hbs1l	96	72.792	Scleropages_formosus
ENSORLG00000016559	hbs1l	100	81.339	ENSSMAG00000010621	hbs1l	100	81.508	Scophthalmus_maximus
ENSORLG00000016559	hbs1l	100	86.344	ENSSDUG00000012974	hbs1l	100	86.344	Seriola_dumerili
ENSORLG00000016559	hbs1l	100	85.775	ENSSLDG00000004960	hbs1l	99	88.497	Seriola_lalandi_dorsalis
ENSORLG00000016559	hbs1l	98	69.030	ENSSARG00000006747	HBS1L	100	69.275	Sorex_araneus
ENSORLG00000016559	hbs1l	99	68.369	ENSSPUG00000012389	HBS1L	99	68.085	Sphenodon_punctatus
ENSORLG00000016559	hbs1l	97	69.985	ENSSSCG00000004169	HBS1L	100	68.750	Sus_scrofa
ENSORLG00000016559	hbs1l	99	69.362	ENSTGUG00000011507	HBS1L	99	68.741	Taeniopygia_guttata
ENSORLG00000016559	hbs1l	99	79.915	ENSTRUG00000016128	hbs1l	99	79.915	Takifugu_rubripes
ENSORLG00000016559	hbs1l	99	79.886	ENSTNIG00000016320	hbs1l	99	79.886	Tetraodon_nigroviridis
ENSORLG00000016559	hbs1l	100	64.476	ENSTBEG00000009950	HBS1L	100	64.476	Tupaia_belangeri
ENSORLG00000016559	hbs1l	99	70.014	ENSTTRG00000003715	HBS1L	99	69.405	Tursiops_truncatus
ENSORLG00000016559	hbs1l	100	70.183	ENSUAMG00000001064	HBS1L	100	69.577	Ursus_americanus
ENSORLG00000016559	hbs1l	100	70.042	ENSUMAG00000024395	HBS1L	98	78.464	Ursus_maritimus
ENSORLG00000016559	hbs1l	84	80.075	ENSVPAG00000006280	HBS1L	84	80.075	Vicugna_pacos
ENSORLG00000016559	hbs1l	100	69.902	ENSVVUG00000000295	HBS1L	100	69.155	Vulpes_vulpes
ENSORLG00000016559	hbs1l	100	68.883	ENSXETG00000003726	hbs1l	100	69.633	Xenopus_tropicalis
ENSORLG00000016559	hbs1l	99	82.739	ENSXCOG00000005323	hbs1l	100	82.739	Xiphophorus_couchianus
ENSORLG00000016559	hbs1l	100	84.473	ENSXMAG00000004359	hbs1l	100	84.473	Xiphophorus_maculatus