EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000016816 (Gene tree)
Gene ID: 101156162
Gene Symbol: r3hcc1
Alias: -
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 5356 bases
Position: chr5:30849289-30854644
Accession: 101156162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000021040	R3H	PF01424.22	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000021041	-	1816	XM_020703583	ENSORLP00000021040	374 (aa)	XP_020559242	H2MQL8

Gene Model

Click here to download ENSORLG00000016816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000016816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000016816	r3hcc1	97	34.474	ENSG00000104679	R3HCC1	90	34.828	Homo_sapiens
ENSORLG00000016816	r3hcc1	99	48.883	ENSAPOG00000003616	r3hcc1	89	49.109	Acanthochromis_polyacanthus
ENSORLG00000016816	r3hcc1	97	33.575	ENSAMEG00000002963	R3HCC1	83	32.759	Ailuropoda_melanoleuca
ENSORLG00000016816	r3hcc1	100	43.155	ENSACIG00000017144	r3hcc1	95	43.155	Amphilophus_citrinellus
ENSORLG00000016816	r3hcc1	99	49.257	ENSAOCG00000003945	r3hcc1	96	50.891	Amphiprion_ocellaris
ENSORLG00000016816	r3hcc1	99	49.505	ENSAPEG00000003613	r3hcc1	96	50.000	Amphiprion_percula
ENSORLG00000016816	r3hcc1	97	52.051	ENSATEG00000023860	r3hcc1	99	52.897	Anabas_testudineus
ENSORLG00000016816	r3hcc1	98	34.634	ENSACAG00000016627	R3HCC1	90	34.783	Anolis_carolinensis
ENSORLG00000016816	r3hcc1	99	34.447	ENSANAG00000036169	R3HCC1	92	33.933	Aotus_nancymaae
ENSORLG00000016816	r3hcc1	99	32.936	ENSBTAG00000025830	R3HCC1	89	32.936	Bos_taurus
ENSORLG00000016816	r3hcc1	99	33.418	ENSCJAG00000020118	R3HCC1	92	33.163	Callithrix_jacchus
ENSORLG00000016816	r3hcc1	97	32.274	ENSCAFG00000009210	R3HCC1	87	33.333	Canis_familiaris
ENSORLG00000016816	r3hcc1	80	30.725	ENSCAFG00020012870	R3HCC1	78	31.085	Canis_lupus_dingo
ENSORLG00000016816	r3hcc1	99	33.176	ENSCHIG00000009107	R3HCC1	92	33.810	Capra_hircus
ENSORLG00000016816	r3hcc1	97	33.911	ENSTSYG00000000511	R3HCC1	71	32.840	Carlito_syrichta
ENSORLG00000016816	r3hcc1	92	30.698	ENSCAPG00000015813	R3HCC1	63	38.298	Cavia_aperea
ENSORLG00000016816	r3hcc1	97	33.408	ENSCPOG00000009696	R3HCC1	74	38.350	Cavia_porcellus
ENSORLG00000016816	r3hcc1	99	32.990	ENSCCAG00000037811	R3HCC1	92	32.817	Cebus_capucinus
ENSORLG00000016816	r3hcc1	99	33.766	ENSCATG00000032971	R3HCC1	90	35.013	Cercocebus_atys
ENSORLG00000016816	r3hcc1	99	35.208	ENSCLAG00000015556	R3HCC1	78	34.474	Chinchilla_lanigera
ENSORLG00000016816	r3hcc1	99	33.413	ENSCHOG00000000396	R3HCC1	89	33.654	Choloepus_hoffmanni
ENSORLG00000016816	r3hcc1	97	34.316	ENSCANG00000029441	R3HCC1	90	34.133	Colobus_angolensis_palliatus
ENSORLG00000016816	r3hcc1	72	44.805	ENSCGRG00001014977	R3hcc1	61	43.114	Cricetulus_griseus_chok1gshd
ENSORLG00000016816	r3hcc1	72	44.805	ENSCGRG00000004454	R3hcc1	61	43.114	Cricetulus_griseus_crigri
ENSORLG00000016816	r3hcc1	100	49.750	ENSCSEG00000005748	r3hcc1	96	50.000	Cynoglossus_semilaevis
ENSORLG00000016816	r3hcc1	85	45.763	ENSCVAG00000002640	r3hcc1	94	46.110	Cyprinodon_variegatus
ENSORLG00000016816	r3hcc1	98	39.895	ENSDARG00000099593	r3hcc1	92	39.895	Danio_rerio
ENSORLG00000016816	r3hcc1	97	34.140	ENSDNOG00000007168	R3HCC1	84	34.053	Dasypus_novemcinctus
ENSORLG00000016816	r3hcc1	80	42.667	ENSDORG00000026365	R3hcc1	93	32.135	Dipodomys_ordii
ENSORLG00000016816	r3hcc1	99	33.333	ENSEASG00005018782	R3HCC1	74	33.090	Equus_asinus_asinus
ENSORLG00000016816	r3hcc1	99	33.652	ENSECAG00000025013	R3HCC1	90	33.656	Equus_caballus
ENSORLG00000016816	r3hcc1	72	45.695	ENSEEUG00000011918	R3HCC1	68	42.473	Erinaceus_europaeus
ENSORLG00000016816	r3hcc1	98	42.439	ENSELUG00000023650	r3hcc1	98	42.752	Esox_lucius
ENSORLG00000016816	r3hcc1	99	33.573	ENSFCAG00000012395	R3HCC1	89	33.413	Felis_catus
ENSORLG00000016816	r3hcc1	92	41.758	ENSFDAG00000001572	R3HCC1	93	31.925	Fukomys_damarensis
ENSORLG00000016816	r3hcc1	96	39.835	ENSGMOG00000017590	-	91	40.443	Gadus_morhua
ENSORLG00000016816	r3hcc1	100	53.418	ENSGAFG00000008747	-	93	54.331	Gambusia_affinis
ENSORLG00000016816	r3hcc1	97	51.948	ENSGACG00000008447	r3hcc1	90	51.688	Gasterosteus_aculeatus
ENSORLG00000016816	r3hcc1	99	32.383	ENSGGOG00000013817	R3HCC1	91	33.500	Gorilla_gorilla
ENSORLG00000016816	r3hcc1	72	73.770	ENSHBUG00000022250	-	79	73.770	Haplochromis_burtoni
ENSORLG00000016816	r3hcc1	97	33.577	ENSHGLG00000010517	R3HCC1	84	33.170	Heterocephalus_glaber_female
ENSORLG00000016816	r3hcc1	97	33.577	ENSHGLG00100006388	R3HCC1	84	33.170	Heterocephalus_glaber_male
ENSORLG00000016816	r3hcc1	98	51.087	ENSHCOG00000011745	r3hcc1	88	51.200	Hippocampus_comes
ENSORLG00000016816	r3hcc1	98	43.351	ENSIPUG00000024504	r3hcc1	82	43.883	Ictalurus_punctatus
ENSORLG00000016816	r3hcc1	80	43.226	ENSSTOG00000027130	R3HCC1	64	43.226	Ictidomys_tridecemlineatus
ENSORLG00000016816	r3hcc1	80	44.295	ENSJJAG00000013075	R3hcc1	92	31.702	Jaculus_jaculus
ENSORLG00000016816	r3hcc1	100	50.761	ENSKMAG00000000286	r3hcc1	100	50.895	Kryptolebias_marmoratus
ENSORLG00000016816	r3hcc1	73	46.154	ENSLACG00000011894	R3HCC1	61	46.154	Latimeria_chalumnae
ENSORLG00000016816	r3hcc1	98	40.000	ENSLOCG00000015442	r3hcc1	96	40.000	Lepisosteus_oculatus
ENSORLG00000016816	r3hcc1	75	42.945	ENSLAFG00000016137	R3HCC1	55	42.945	Loxodonta_africana
ENSORLG00000016816	r3hcc1	97	34.204	ENSMFAG00000032894	R3HCC1	90	33.871	Macaca_fascicularis
ENSORLG00000016816	r3hcc1	99	34.103	ENSMMUG00000016655	R3HCC1	90	33.952	Macaca_mulatta
ENSORLG00000016816	r3hcc1	97	35.279	ENSMNEG00000043283	R3HCC1	90	34.409	Macaca_nemestrina
ENSORLG00000016816	r3hcc1	99	34.840	ENSMLEG00000030147	R3HCC1	90	34.959	Mandrillus_leucophaeus
ENSORLG00000016816	r3hcc1	100	49.257	ENSMAMG00000018146	r3hcc1	100	49.015	Mastacembelus_armatus
ENSORLG00000016816	r3hcc1	97	33.415	ENSMGAG00000001356	R3HCC1	84	33.002	Meleagris_gallopavo
ENSORLG00000016816	r3hcc1	70	46.099	ENSMAUG00000016096	R3hcc1	59	43.396	Mesocricetus_auratus
ENSORLG00000016816	r3hcc1	99	33.503	ENSMICG00000011146	R3HCC1	92	34.456	Microcebus_murinus
ENSORLG00000016816	r3hcc1	77	45.517	ENSMOCG00000018508	R3hcc1	60	45.517	Microtus_ochrogaster
ENSORLG00000016816	r3hcc1	100	48.010	ENSMALG00000000731	r3hcc1	100	48.259	Monopterus_albus
ENSORLG00000016816	r3hcc1	82	44.138	MGP_CAROLIEiJ_G0019467	R3hcc1	58	41.718	Mus_caroli
ENSORLG00000016816	r3hcc1	71	44.138	ENSMUSG00000034194	R3hcc1	60	42.442	Mus_musculus
ENSORLG00000016816	r3hcc1	83	42.857	MGP_PahariEiJ_G0030484	R3hcc1	83	36.913	Mus_pahari
ENSORLG00000016816	r3hcc1	71	44.138	MGP_SPRETEiJ_G0020359	R3hcc1	60	42.442	Mus_spretus
ENSORLG00000016816	r3hcc1	99	32.614	ENSMPUG00000003457	R3HCC1	81	33.094	Mustela_putorius_furo
ENSORLG00000016816	r3hcc1	97	33.415	ENSMLUG00000000266	R3HCC1	84	33.578	Myotis_lucifugus
ENSORLG00000016816	r3hcc1	69	46.099	ENSNGAG00000016747	R3hcc1	62	43.030	Nannospalax_galili
ENSORLG00000016816	r3hcc1	74	38.387	ENSNBRG00000016975	-	69	38.065	Neolamprologus_brichardi
ENSORLG00000016816	r3hcc1	90	31.117	ENSNLEG00000015944	R3HCC1	80	31.383	Nomascus_leucogenys
ENSORLG00000016816	r3hcc1	99	34.739	ENSMEUG00000010587	R3HCC1	91	35.627	Notamacropus_eugenii
ENSORLG00000016816	r3hcc1	80	41.463	ENSOPRG00000013390	R3HCC1	88	35.323	Ochotona_princeps
ENSORLG00000016816	r3hcc1	99	32.222	ENSODEG00000007529	R3HCC1	93	31.818	Octodon_degus
ENSORLG00000016816	r3hcc1	97	33.002	ENSOANG00000013877	R3HCC1	89	33.499	Ornithorhynchus_anatinus
ENSORLG00000016816	r3hcc1	99	33.820	ENSOCUG00000023554	R3HCC1	79	33.827	Oryctolagus_cuniculus
ENSORLG00000016816	r3hcc1	100	97.861	ENSORLG00020012005	r3hcc1	100	97.861	Oryzias_latipes_hni
ENSORLG00000016816	r3hcc1	100	97.326	ENSORLG00015007018	r3hcc1	100	97.326	Oryzias_latipes_hsok
ENSORLG00000016816	r3hcc1	100	76.190	ENSOMEG00000000816	r3hcc1	100	74.603	Oryzias_melastigma
ENSORLG00000016816	r3hcc1	97	33.732	ENSOGAG00000001291	R3HCC1	84	34.644	Otolemur_garnettii
ENSORLG00000016816	r3hcc1	99	32.394	ENSOARG00000010146	R3HCC1	90	33.492	Ovis_aries
ENSORLG00000016816	r3hcc1	99	33.573	ENSPPRG00000002522	R3HCC1	93	33.654	Panthera_pardus
ENSORLG00000016816	r3hcc1	94	34.343	ENSPTIG00000011230	R3HCC1	92	34.430	Panthera_tigris_altaica
ENSORLG00000016816	r3hcc1	97	31.719	ENSPTRG00000020076	R3HCC1	90	33.506	Pan_troglodytes
ENSORLG00000016816	r3hcc1	99	34.383	ENSPANG00000000453	R3HCC1	90	35.638	Papio_anubis
ENSORLG00000016816	r3hcc1	96	46.354	ENSPKIG00000020397	-	96	46.354	Paramormyrops_kingsleyae
ENSORLG00000016816	r3hcc1	96	46.933	ENSPKIG00000014426	-	96	46.933	Paramormyrops_kingsleyae
ENSORLG00000016816	r3hcc1	97	35.714	ENSPSIG00000017664	R3HCC1	90	35.309	Pelodiscus_sinensis
ENSORLG00000016816	r3hcc1	56	52.459	ENSPMGG00000007792	r3hcc1	94	33.890	Periophthalmus_magnuspinnatus
ENSORLG00000016816	r3hcc1	78	44.218	ENSPEMG00000007118	R3hcc1	56	44.218	Peromyscus_maniculatus_bairdii
ENSORLG00000016816	r3hcc1	95	32.587	ENSPCIG00000022718	-	55	41.290	Phascolarctos_cinereus
ENSORLG00000016816	r3hcc1	100	52.405	ENSPFOG00000022301	r3hcc1	87	52.405	Poecilia_formosa
ENSORLG00000016816	r3hcc1	100	52.152	ENSPLAG00000010794	r3hcc1	87	52.658	Poecilia_latipinna
ENSORLG00000016816	r3hcc1	100	52.405	ENSPMEG00000022515	r3hcc1	87	52.405	Poecilia_mexicana
ENSORLG00000016816	r3hcc1	100	51.899	ENSPREG00000000713	r3hcc1	87	52.405	Poecilia_reticulata
ENSORLG00000016816	r3hcc1	71	41.509	ENSPPYG00000018436	R3HCC1	95	32.331	Pongo_abelii
ENSORLG00000016816	r3hcc1	71	44.595	ENSPCAG00000012229	R3HCC1	59	44.595	Procavia_capensis
ENSORLG00000016816	r3hcc1	99	32.746	ENSPCOG00000027554	R3HCC1	92	34.197	Propithecus_coquereli
ENSORLG00000016816	r3hcc1	99	33.981	ENSPVAG00000009829	R3HCC1	89	33.985	Pteropus_vampyrus
ENSORLG00000016816	r3hcc1	96	43.562	ENSPNAG00000023875	r3hcc1	94	42.819	Pygocentrus_nattereri
ENSORLG00000016816	r3hcc1	99	32.895	ENSRBIG00000028045	R3HCC1	90	33.862	Rhinopithecus_bieti
ENSORLG00000016816	r3hcc1	99	32.895	ENSRROG00000031126	R3HCC1	90	33.862	Rhinopithecus_roxellana
ENSORLG00000016816	r3hcc1	99	32.918	ENSSBOG00000022590	R3HCC1	92	32.552	Saimiri_boliviensis_boliviensis
ENSORLG00000016816	r3hcc1	99	45.455	ENSSFOG00015013507	r3hcc1	100	44.724	Scleropages_formosus
ENSORLG00000016816	r3hcc1	100	53.071	ENSSMAG00000008647	r3hcc1	100	51.970	Scophthalmus_maximus
ENSORLG00000016816	r3hcc1	100	53.202	ENSSDUG00000022786	r3hcc1	94	54.187	Seriola_dumerili
ENSORLG00000016816	r3hcc1	100	53.941	ENSSLDG00000019031	r3hcc1	94	54.433	Seriola_lalandi_dorsalis
ENSORLG00000016816	r3hcc1	99	51.134	ENSSPAG00000013497	r3hcc1	96	51.020	Stegastes_partitus
ENSORLG00000016816	r3hcc1	97	30.500	ENSSSCG00000037347	-	51	40.845	Sus_scrofa
ENSORLG00000016816	r3hcc1	73	44.586	ENSSSCG00000039915	-	67	41.304	Sus_scrofa
ENSORLG00000016816	r3hcc1	100	47.409	ENSTRUG00000015880	r3hcc1	95	47.150	Takifugu_rubripes
ENSORLG00000016816	r3hcc1	99	32.374	ENSTTRG00000012247	R3HCC1	89	31.415	Tursiops_truncatus
ENSORLG00000016816	r3hcc1	97	32.763	ENSUAMG00000007344	R3HCC1	91	33.744	Ursus_americanus
ENSORLG00000016816	r3hcc1	99	32.039	ENSVVUG00000005056	R3HCC1	87	33.333	Vulpes_vulpes
ENSORLG00000016816	r3hcc1	97	50.000	ENSXCOG00000017626	r3hcc1	86	51.047	Xiphophorus_couchianus
ENSORLG00000016816	r3hcc1	100	52.405	ENSXMAG00000018375	r3hcc1	93	53.543	Xiphophorus_maculatus