EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000016960 (Gene tree)
Gene ID: -
Gene Symbol: mrpl54
Alias: -
Full Name: mitochondrial ribosomal protein L54
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 6218 bases
Position: chr4:30522565-30528782
Accession: ZDB-GENE-050208-381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000021216	Ribosomal_L37	PF08561.10	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000021217	-	375	-	ENSORLP00000021216	124 (aa)	-	H2MR40

Gene Model

Click here to download ENSORLG00000016960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000016960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000016960	mrpl54	77	57.292	ENSG00000183617	MRPL54	69	57.292	Homo_sapiens
ENSORLG00000016960	mrpl54	77	79.167	ENSAPOG00000022643	mrpl54	70	79.167	Acanthochromis_polyacanthus
ENSORLG00000016960	mrpl54	71	57.955	ENSAMEG00000005908	MRPL54	72	54.545	Ailuropoda_melanoleuca
ENSORLG00000016960	mrpl54	71	81.818	ENSACIG00000006438	mrpl54	70	83.333	Amphilophus_citrinellus
ENSORLG00000016960	mrpl54	69	82.353	ENSAOCG00000006430	mrpl54	70	83.333	Amphiprion_ocellaris
ENSORLG00000016960	mrpl54	69	82.353	ENSAPEG00000023406	mrpl54	70	83.333	Amphiprion_percula
ENSORLG00000016960	mrpl54	69	73.256	ENSATEG00000004969	mrpl54	70	72.917	Anabas_testudineus
ENSORLG00000016960	mrpl54	77	54.167	ENSACAG00000017747	-	90	54.167	Anolis_carolinensis
ENSORLG00000016960	mrpl54	84	56.075	ENSANAG00000028692	MRPL54	78	56.075	Aotus_nancymaae
ENSORLG00000016960	mrpl54	71	78.409	ENSACLG00000001877	mrpl54	70	80.208	Astatotilapia_calliptera
ENSORLG00000016960	mrpl54	66	69.512	ENSAMXG00000018143	mrpl54	68	69.792	Astyanax_mexicanus
ENSORLG00000016960	mrpl54	69	57.647	ENSBTAG00000008396	MRPL54	71	53.061	Bos_taurus
ENSORLG00000016960	mrpl54	62	38.272	WBGene00009128	mrpl-54	75	33.654	Caenorhabditis_elegans
ENSORLG00000016960	mrpl54	84	55.140	ENSCJAG00000014998	MRPL54	78	55.140	Callithrix_jacchus
ENSORLG00000016960	mrpl54	71	56.818	ENSCAFG00000019192	MRPL54	70	55.208	Canis_familiaris
ENSORLG00000016960	mrpl54	71	56.818	ENSCAFG00020018333	MRPL54	70	55.208	Canis_lupus_dingo
ENSORLG00000016960	mrpl54	69	57.647	ENSCHIG00000026538	MRPL54	78	52.778	Capra_hircus
ENSORLG00000016960	mrpl54	77	53.684	ENSCAPG00000012166	MRPL54	100	53.684	Cavia_aperea
ENSORLG00000016960	mrpl54	77	54.167	ENSCPOG00000031082	MRPL54	70	54.167	Cavia_porcellus
ENSORLG00000016960	mrpl54	84	55.140	ENSCCAG00000000138	MRPL54	78	55.140	Cebus_capucinus
ENSORLG00000016960	mrpl54	92	49.573	ENSCATG00000014066	MRPL54	85	49.573	Cercocebus_atys
ENSORLG00000016960	mrpl54	78	54.639	ENSCLAG00000007908	MRPL54	72	54.639	Chinchilla_lanigera
ENSORLG00000016960	mrpl54	92	49.573	ENSCSAG00000010950	MRPL54	85	49.573	Chlorocebus_sabaeus
ENSORLG00000016960	mrpl54	76	55.319	ENSCPBG00000017103	MRPL54	54	55.319	Chrysemys_picta_bellii
ENSORLG00000016960	mrpl54	81	35.780	ENSCING00000019896	-	77	35.780	Ciona_intestinalis
ENSORLG00000016960	mrpl54	75	39.785	ENSCSAVG00000009604	-	64	39.785	Ciona_savignyi
ENSORLG00000016960	mrpl54	92	51.282	ENSCANG00000027841	MRPL54	85	51.282	Colobus_angolensis_palliatus
ENSORLG00000016960	mrpl54	77	56.250	ENSCGRG00001019482	Mrpl54	70	56.250	Cricetulus_griseus_chok1gshd
ENSORLG00000016960	mrpl54	77	56.250	ENSCGRG00000010923	Mrpl54	70	56.250	Cricetulus_griseus_crigri
ENSORLG00000016960	mrpl54	69	70.588	ENSCSEG00000019883	mrpl54	63	72.340	Cynoglossus_semilaevis
ENSORLG00000016960	mrpl54	77	81.250	ENSCVAG00000002210	mrpl54	69	81.250	Cyprinodon_variegatus
ENSORLG00000016960	mrpl54	93	64.348	ENSDARG00000071468	mrpl54	81	64.348	Danio_rerio
ENSORLG00000016960	mrpl54	69	58.824	ENSDNOG00000007387	MRPL54	77	55.660	Dasypus_novemcinctus
ENSORLG00000016960	mrpl54	71	55.682	ENSDORG00000005326	Mrpl54	71	55.319	Dipodomys_ordii
ENSORLG00000016960	mrpl54	63	47.436	FBgn0034579	mRpL54	59	47.436	Drosophila_melanogaster
ENSORLG00000016960	mrpl54	77	52.083	ENSETEG00000017500	MRPL54	72	52.083	Echinops_telfairi
ENSORLG00000016960	mrpl54	75	45.161	ENSEBUG00000003179	mrpl54	80	45.161	Eptatretus_burgeri
ENSORLG00000016960	mrpl54	69	57.647	ENSEASG00005022283	MRPL54	66	57.143	Equus_asinus_asinus
ENSORLG00000016960	mrpl54	69	57.647	ENSECAG00000001515	MRPL54	66	57.143	Equus_caballus
ENSORLG00000016960	mrpl54	94	50.758	ENSELUG00000022358	mrpl54	95	54.962	Esox_lucius
ENSORLG00000016960	mrpl54	71	56.818	ENSFCAG00000007144	MRPL54	70	55.208	Felis_catus
ENSORLG00000016960	mrpl54	81	55.000	ENSFALG00000011660	MRPL54	93	55.000	Ficedula_albicollis
ENSORLG00000016960	mrpl54	77	54.167	ENSFDAG00000020803	MRPL54	70	54.167	Fukomys_damarensis
ENSORLG00000016960	mrpl54	69	58.140	ENSGALG00000027611	MRPL54	80	56.701	Gallus_gallus
ENSORLG00000016960	mrpl54	69	76.744	ENSGAFG00000016193	mrpl54	68	76.596	Gambusia_affinis
ENSORLG00000016960	mrpl54	85	52.830	ENSGAGG00000020238	MRPL54	83	52.830	Gopherus_agassizii
ENSORLG00000016960	mrpl54	77	57.292	ENSGGOG00000014722	MRPL54	69	57.292	Gorilla_gorilla
ENSORLG00000016960	mrpl54	71	78.409	ENSHBUG00000009028	mrpl54	57	80.208	Haplochromis_burtoni
ENSORLG00000016960	mrpl54	77	53.684	ENSHGLG00000006157	MRPL54	71	53.684	Heterocephalus_glaber_female
ENSORLG00000016960	mrpl54	77	53.684	ENSHGLG00100000788	MRPL54	71	53.684	Heterocephalus_glaber_male
ENSORLG00000016960	mrpl54	71	78.409	ENSHCOG00000000536	mrpl54	68	79.167	Hippocampus_comes
ENSORLG00000016960	mrpl54	71	68.182	ENSIPUG00000024854	mrpl54	69	70.833	Ictalurus_punctatus
ENSORLG00000016960	mrpl54	77	55.208	ENSSTOG00000022378	MRPL54	98	55.208	Ictidomys_tridecemlineatus
ENSORLG00000016960	mrpl54	75	59.140	ENSJJAG00000020405	Mrpl54	67	59.140	Jaculus_jaculus
ENSORLG00000016960	mrpl54	77	78.125	ENSKMAG00000022310	mrpl54	69	78.125	Kryptolebias_marmoratus
ENSORLG00000016960	mrpl54	77	78.125	ENSLBEG00000005935	mrpl54	70	78.125	Labrus_bergylta
ENSORLG00000016960	mrpl54	77	62.500	ENSLACG00000013912	MRPL54	72	62.500	Latimeria_chalumnae
ENSORLG00000016960	mrpl54	71	57.955	ENSLOCG00000003860	mrpl54	70	61.856	Lepisosteus_oculatus
ENSORLG00000016960	mrpl54	72	55.056	ENSLAFG00000029657	MRPL54	70	55.670	Loxodonta_africana
ENSORLG00000016960	mrpl54	92	49.573	ENSMFAG00000003311	MRPL54	85	49.573	Macaca_fascicularis
ENSORLG00000016960	mrpl54	92	49.573	ENSMMUG00000044080	MRPL54	85	49.573	Macaca_mulatta
ENSORLG00000016960	mrpl54	92	49.573	ENSMNEG00000039499	MRPL54	85	49.573	Macaca_nemestrina
ENSORLG00000016960	mrpl54	77	78.125	ENSMAMG00000003291	mrpl54	73	78.125	Mastacembelus_armatus
ENSORLG00000016960	mrpl54	71	78.409	ENSMZEG00005009023	mrpl54	57	80.208	Maylandia_zebra
ENSORLG00000016960	mrpl54	78	56.701	ENSMGAG00000000951	MRPL54	100	56.701	Meleagris_gallopavo
ENSORLG00000016960	mrpl54	85	56.190	ENSMAUG00000009543	Mrpl54	78	56.190	Mesocricetus_auratus
ENSORLG00000016960	mrpl54	69	57.647	ENSMICG00000034581	MRPL54	61	54.167	Microcebus_murinus
ENSORLG00000016960	mrpl54	77	57.292	ENSMOCG00000017895	Mrpl54	70	57.292	Microtus_ochrogaster
ENSORLG00000016960	mrpl54	77	73.958	ENSMMOG00000020370	mrpl54	77	73.958	Mola_mola
ENSORLG00000016960	mrpl54	75	55.914	ENSMODG00000000602	MRPL54	68	55.914	Monodelphis_domestica
ENSORLG00000016960	mrpl54	71	78.409	ENSMALG00000020280	mrpl54	70	80.208	Monopterus_albus
ENSORLG00000016960	mrpl54	71	59.091	MGP_CAROLIEiJ_G0015629	Mrpl54	72	57.732	Mus_caroli
ENSORLG00000016960	mrpl54	69	58.824	ENSMUSG00000034932	Mrpl54	72	56.701	Mus_musculus
ENSORLG00000016960	mrpl54	78	55.670	MGP_PahariEiJ_G0031042	Mrpl54	71	55.670	Mus_pahari
ENSORLG00000016960	mrpl54	71	59.091	MGP_SPRETEiJ_G0016447	Mrpl54	72	57.732	Mus_spretus
ENSORLG00000016960	mrpl54	67	61.446	ENSMLUG00000010801	MRPL54	91	56.250	Myotis_lucifugus
ENSORLG00000016960	mrpl54	71	54.545	ENSNGAG00000021044	Mrpl54	78	50.459	Nannospalax_galili
ENSORLG00000016960	mrpl54	71	79.545	ENSNBRG00000000568	mrpl54	70	81.250	Neolamprologus_brichardi
ENSORLG00000016960	mrpl54	77	59.375	ENSMEUG00000013033	MRPL54	72	59.375	Notamacropus_eugenii
ENSORLG00000016960	mrpl54	78	52.577	ENSOPRG00000010035	-	72	52.577	Ochotona_princeps
ENSORLG00000016960	mrpl54	77	52.083	ENSODEG00000013969	MRPL54	70	52.083	Octodon_degus
ENSORLG00000016960	mrpl54	71	78.409	ENSONIG00000002312	mrpl54	62	80.208	Oreochromis_niloticus
ENSORLG00000016960	mrpl54	88	88.991	ENSORLG00020014934	mrpl54	99	88.991	Oryzias_latipes_hni
ENSORLG00000016960	mrpl54	94	87.179	ENSORLG00015010788	mrpl54	91	87.179	Oryzias_latipes_hsok
ENSORLG00000016960	mrpl54	71	80.682	ENSOMEG00000009005	mrpl54	70	81.250	Oryzias_melastigma
ENSORLG00000016960	mrpl54	71	61.364	ENSOGAG00000033519	-	70	58.333	Otolemur_garnettii
ENSORLG00000016960	mrpl54	69	61.628	ENSOGAG00000026254	-	66	62.637	Otolemur_garnettii
ENSORLG00000016960	mrpl54	77	57.292	ENSPPAG00000042418	MRPL54	69	57.292	Pan_paniscus
ENSORLG00000016960	mrpl54	77	57.292	ENSPPRG00000012325	MRPL54	70	57.292	Panthera_pardus
ENSORLG00000016960	mrpl54	71	57.955	ENSPTIG00000017727	MRPL54	68	56.250	Panthera_tigris_altaica
ENSORLG00000016960	mrpl54	77	57.292	ENSPTRG00000010276	MRPL54	69	57.292	Pan_troglodytes
ENSORLG00000016960	mrpl54	92	49.573	ENSPANG00000033944	MRPL54	85	49.573	Papio_anubis
ENSORLG00000016960	mrpl54	77	68.750	ENSPKIG00000009984	mrpl54	56	68.750	Paramormyrops_kingsleyae
ENSORLG00000016960	mrpl54	77	52.632	ENSPSIG00000013587	MRPL54	100	52.632	Pelodiscus_sinensis
ENSORLG00000016960	mrpl54	71	72.727	ENSPMGG00000015972	mrpl54	63	75.000	Periophthalmus_magnuspinnatus
ENSORLG00000016960	mrpl54	77	56.250	ENSPEMG00000022929	Mrpl54	70	56.250	Peromyscus_maniculatus_bairdii
ENSORLG00000016960	mrpl54	75	55.914	ENSPCIG00000025383	MRPL54	68	55.914	Phascolarctos_cinereus
ENSORLG00000016960	mrpl54	76	78.723	ENSPFOG00000007409	mrpl54	68	78.723	Poecilia_formosa
ENSORLG00000016960	mrpl54	76	78.723	ENSPLAG00000001633	mrpl54	68	78.723	Poecilia_latipinna
ENSORLG00000016960	mrpl54	76	78.723	ENSPLAG00000001640	mrpl54	68	78.723	Poecilia_latipinna
ENSORLG00000016960	mrpl54	76	78.723	ENSPMEG00000021078	mrpl54	68	78.723	Poecilia_mexicana
ENSORLG00000016960	mrpl54	76	78.723	ENSPMEG00000021068	mrpl54	68	78.723	Poecilia_mexicana
ENSORLG00000016960	mrpl54	76	78.723	ENSPREG00000012425	mrpl54	68	78.723	Poecilia_reticulata
ENSORLG00000016960	mrpl54	77	58.333	ENSPPYG00000009386	MRPL54	69	58.333	Pongo_abelii
ENSORLG00000016960	mrpl54	85	50.926	ENSPCAG00000000690	MRPL54	78	50.926	Procavia_capensis
ENSORLG00000016960	mrpl54	71	60.227	ENSPCOG00000027550	MRPL54	70	58.333	Propithecus_coquereli
ENSORLG00000016960	mrpl54	71	77.273	ENSPNYG00000022006	mrpl54	57	79.167	Pundamilia_nyererei
ENSORLG00000016960	mrpl54	67	67.470	ENSPNAG00000000077	mrpl54	69	66.667	Pygocentrus_nattereri
ENSORLG00000016960	mrpl54	77	54.167	ENSRNOG00000020464	Mrpl54	71	54.167	Rattus_norvegicus
ENSORLG00000016960	mrpl54	92	51.282	ENSRBIG00000027038	MRPL54	87	51.282	Rhinopithecus_bieti
ENSORLG00000016960	mrpl54	92	51.282	ENSRROG00000018776	MRPL54	87	51.282	Rhinopithecus_roxellana
ENSORLG00000016960	mrpl54	84	54.206	ENSSBOG00000028081	MRPL54	78	54.206	Saimiri_boliviensis_boliviensis
ENSORLG00000016960	mrpl54	69	56.977	ENSSHAG00000002557	MRPL54	68	58.065	Sarcophilus_harrisii
ENSORLG00000016960	mrpl54	72	68.539	ENSSFOG00015008073	mrpl54	69	69.792	Scleropages_formosus
ENSORLG00000016960	mrpl54	71	79.545	ENSSMAG00000009226	mrpl54	70	79.167	Scophthalmus_maximus
ENSORLG00000016960	mrpl54	77	78.125	ENSSDUG00000009545	mrpl54	69	78.125	Seriola_dumerili
ENSORLG00000016960	mrpl54	77	81.250	ENSSLDG00000001781	mrpl54	69	81.250	Seriola_lalandi_dorsalis
ENSORLG00000016960	mrpl54	80	57.576	ENSSPUG00000015361	MRPL54	75	57.576	Sphenodon_punctatus
ENSORLG00000016960	mrpl54	77	70.833	ENSSPAG00000015601	mrpl54	70	70.833	Stegastes_partitus
ENSORLG00000016960	mrpl54	77	70.833	ENSSPAG00000003775	-	70	70.833	Stegastes_partitus
ENSORLG00000016960	mrpl54	72	55.056	ENSSSCG00000024242	MRPL54	70	53.125	Sus_scrofa
ENSORLG00000016960	mrpl54	71	73.864	ENSTRUG00000004609	mrpl54	70	75.000	Takifugu_rubripes
ENSORLG00000016960	mrpl54	71	72.727	ENSTNIG00000015468	mrpl54	70	75.000	Tetraodon_nigroviridis
ENSORLG00000016960	mrpl54	85	51.429	ENSTTRG00000004410	MRPL54	78	51.429	Tursiops_truncatus
ENSORLG00000016960	mrpl54	71	57.955	ENSUAMG00000021572	MRPL54	72	54.545	Ursus_americanus
ENSORLG00000016960	mrpl54	71	57.955	ENSUMAG00000007416	MRPL54	72	54.545	Ursus_maritimus
ENSORLG00000016960	mrpl54	71	56.818	ENSVVUG00000004420	MRPL54	70	55.208	Vulpes_vulpes
ENSORLG00000016960	mrpl54	78	59.794	ENSXETG00000033250	MRPL54	73	59.794	Xenopus_tropicalis
ENSORLG00000016960	mrpl54	69	81.395	ENSXMAG00000003500	mrpl54	68	80.851	Xiphophorus_maculatus