EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000016989 (Gene tree)
Gene ID: 101158935
Gene Symbol: safb
Alias: -
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 10281 bases
Position: chr4:30541472-30551752
Accession: 101158935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000021256	RRM_1	PF00076.22	1.2e-13	1	1
ENSORLP00000021256	SAP	PF02037.27	4.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000021257	-	3217	XM_011474532	ENSORLP00000021256	807 (aa)	XP_011472834	H2MR77

Gene Model

Click here to download ENSORLG00000016989's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000016989's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000016989	safb	66	39.365	ENSG00000160633	SAFB	78	64.463	Homo_sapiens
ENSORLG00000016989	safb	100	77.338	ENSAPOG00000022508	safb	98	78.160	Acanthochromis_polyacanthus
ENSORLG00000016989	safb	66	40.777	ENSAMEG00000012254	SAFB	90	42.940	Ailuropoda_melanoleuca
ENSORLG00000016989	safb	100	70.012	ENSACIG00000006247	safb	98	70.260	Amphilophus_citrinellus
ENSORLG00000016989	safb	95	77.020	ENSAOCG00000006308	safb	99	76.628	Amphiprion_ocellaris
ENSORLG00000016989	safb	100	76.527	ENSAPEG00000023342	safb	98	77.083	Amphiprion_percula
ENSORLG00000016989	safb	100	73.609	ENSATEG00000004998	safb	98	74.697	Anabas_testudineus
ENSORLG00000016989	safb	60	39.789	ENSAPLG00000005780	-	93	43.985	Anas_platyrhynchos
ENSORLG00000016989	safb	59	41.924	ENSAPLG00000006355	-	96	47.250	Anas_platyrhynchos
ENSORLG00000016989	safb	66	41.120	ENSANAG00000028821	SAFB	90	42.725	Aotus_nancymaae
ENSORLG00000016989	safb	100	72.029	ENSACLG00000001926	safb	98	72.359	Astatotilapia_calliptera
ENSORLG00000016989	safb	96	58.502	ENSAMXG00000018154	safb	96	59.386	Astyanax_mexicanus
ENSORLG00000016989	safb	98	42.454	ENSBTAG00000007875	SAFB	91	42.991	Bos_taurus
ENSORLG00000016989	safb	66	40.968	ENSCAFG00000018803	SAFB	77	43.494	Canis_familiaris
ENSORLG00000016989	safb	66	40.968	ENSCAFG00020018943	SAFB	90	43.057	Canis_lupus_dingo
ENSORLG00000016989	safb	98	42.549	ENSCHIG00000007262	SAFB	91	43.089	Capra_hircus
ENSORLG00000016989	safb	57	41.698	ENSTSYG00000001851	-	84	43.696	Carlito_syrichta
ENSORLG00000016989	safb	64	41.554	ENSCCAG00000020193	SAFB	90	42.558	Cebus_capucinus
ENSORLG00000016989	safb	66	39.365	ENSCATG00000029994	SAFB	90	41.447	Cercocebus_atys
ENSORLG00000016989	safb	66	39.365	ENSCSAG00000009949	SAFB	90	41.447	Chlorocebus_sabaeus
ENSORLG00000016989	safb	92	43.126	ENSCPBG00000010936	-	92	45.828	Chrysemys_picta_bellii
ENSORLG00000016989	safb	92	42.111	ENSCPBG00000010928	-	92	44.802	Chrysemys_picta_bellii
ENSORLG00000016989	safb	98	40.293	ENSCANG00000019754	-	89	40.534	Colobus_angolensis_palliatus
ENSORLG00000016989	safb	95	34.884	ENSCANG00000004774	-	60	63.235	Colobus_angolensis_palliatus
ENSORLG00000016989	safb	65	63.208	ENSCSEG00000019870	safb	98	64.906	Cynoglossus_semilaevis
ENSORLG00000016989	safb	100	66.010	ENSCVAG00000002226	safb	98	66.204	Cyprinodon_variegatus
ENSORLG00000016989	safb	95	57.706	ENSDARG00000020467	safb	96	57.619	Danio_rerio
ENSORLG00000016989	safb	67	39.652	ENSDNOG00000015746	SAFB	95	41.236	Dasypus_novemcinctus
ENSORLG00000016989	safb	99	59.908	ENSELUG00000022327	safb	97	60.071	Esox_lucius
ENSORLG00000016989	safb	66	42.173	ENSFCAG00000011835	SAFB	90	43.322	Felis_catus
ENSORLG00000016989	safb	56	40.787	ENSFALG00000013881	-	92	44.920	Ficedula_albicollis
ENSORLG00000016989	safb	65	43.284	ENSFALG00000013882	-	83	45.444	Ficedula_albicollis
ENSORLG00000016989	safb	100	67.399	ENSFHEG00000004219	safb	98	67.500	Fundulus_heteroclitus
ENSORLG00000016989	safb	100	62.976	ENSGMOG00000014280	safb	98	64.068	Gadus_morhua
ENSORLG00000016989	safb	66	42.764	ENSGALG00000013365	-	92	44.713	Gallus_gallus
ENSORLG00000016989	safb	100	63.658	ENSGAFG00000016162	safb	98	64.442	Gambusia_affinis
ENSORLG00000016989	safb	100	68.897	ENSGACG00000011385	safb	98	69.268	Gasterosteus_aculeatus
ENSORLG00000016989	safb	94	47.170	ENSGAGG00000008424	-	94	48.292	Gopherus_agassizii
ENSORLG00000016989	safb	67	46.880	ENSGAGG00000017702	-	82	54.344	Gopherus_agassizii
ENSORLG00000016989	safb	66	39.524	ENSGGOG00000015109	SAFB	90	41.561	Gorilla_gorilla
ENSORLG00000016989	safb	100	64.450	ENSHBUG00000009218	safb	98	67.574	Haplochromis_burtoni
ENSORLG00000016989	safb	94	62.868	ENSHCOG00000001705	safb	98	64.644	Hippocampus_comes
ENSORLG00000016989	safb	99	58.382	ENSIPUG00000024869	safb2	98	58.775	Ictalurus_punctatus
ENSORLG00000016989	safb	60	37.607	ENSSTOG00000002783	SAFB	92	40.336	Ictidomys_tridecemlineatus
ENSORLG00000016989	safb	100	75.962	ENSKMAG00000022308	safb	98	76.753	Kryptolebias_marmoratus
ENSORLG00000016989	safb	100	72.235	ENSLBEG00000006015	safb	98	72.443	Labrus_bergylta
ENSORLG00000016989	safb	66	41.748	ENSLACG00000018090	SAFB	97	46.542	Latimeria_chalumnae
ENSORLG00000016989	safb	98	58.736	ENSLOCG00000003613	safb	98	59.277	Lepisosteus_oculatus
ENSORLG00000016989	safb	98	41.630	ENSLAFG00000003840	SAFB	89	43.677	Loxodonta_africana
ENSORLG00000016989	safb	64	39.632	ENSMFAG00000003885	SAFB	90	41.503	Macaca_fascicularis
ENSORLG00000016989	safb	95	41.097	ENSMMUG00000017970	SAFB	89	43.149	Macaca_mulatta
ENSORLG00000016989	safb	66	39.075	ENSMNEG00000035637	SAFB	89	41.463	Macaca_nemestrina
ENSORLG00000016989	safb	67	37.500	ENSMLEG00000038637	SAFB	89	40.941	Mandrillus_leucophaeus
ENSORLG00000016989	safb	100	74.881	ENSMAMG00000003357	safb	90	75.152	Mastacembelus_armatus
ENSORLG00000016989	safb	100	74.171	ENSMZEG00005009120	safb	98	74.303	Maylandia_zebra
ENSORLG00000016989	safb	62	40.415	ENSMGAG00000001101	-	90	44.192	Meleagris_gallopavo
ENSORLG00000016989	safb	64	43.729	ENSMGAG00000001051	-	78	56.410	Meleagris_gallopavo
ENSORLG00000016989	safb	64	42.301	ENSMICG00000008739	-	89	43.204	Microcebus_murinus
ENSORLG00000016989	safb	85	37.811	ENSMICG00000046795	-	68	66.667	Microcebus_murinus
ENSORLG00000016989	safb	97	42.464	ENSMODG00000001236	SAFB	90	43.584	Monodelphis_domestica
ENSORLG00000016989	safb	100	73.122	ENSMALG00000020330	safb	99	73.159	Monopterus_albus
ENSORLG00000016989	safb	98	41.376	ENSMLUG00000001081	SAFB	90	42.563	Myotis_lucifugus
ENSORLG00000016989	safb	66	39.873	ENSNLEG00000013551	SAFB	94	41.869	Nomascus_leucogenys
ENSORLG00000016989	safb	59	38.869	ENSOPRG00000011561	-	97	40.514	Ochotona_princeps
ENSORLG00000016989	safb	64	40.783	ENSODEG00000014838	SAFB	90	42.710	Octodon_degus
ENSORLG00000016989	safb	100	73.641	ENSONIG00000002318	safb	98	74.123	Oreochromis_niloticus
ENSORLG00000016989	safb	87	38.210	ENSOCUG00000014628	SAFB	90	38.412	Oryctolagus_cuniculus
ENSORLG00000016989	safb	100	88.243	ENSORLG00020000404	safb	100	88.243	Oryzias_latipes_hni
ENSORLG00000016989	safb	100	98.637	ENSORLG00015010733	safb	100	98.637	Oryzias_latipes_hsok
ENSORLG00000016989	safb	100	90.764	ENSOMEG00000009066	safb	98	91.436	Oryzias_melastigma
ENSORLG00000016989	safb	64	41.235	ENSOGAG00000027769	SAFB	90	42.068	Otolemur_garnettii
ENSORLG00000016989	safb	60	44.014	ENSOARG00000007662	-	91	39.977	Ovis_aries
ENSORLG00000016989	safb	64	40.728	ENSPPAG00000035129	SAFB	90	41.917	Pan_paniscus
ENSORLG00000016989	safb	66	42.173	ENSPPRG00000017197	SAFB	90	43.322	Panthera_pardus
ENSORLG00000016989	safb	64	39.804	ENSPTRG00000010335	SAFB	90	41.917	Pan_troglodytes
ENSORLG00000016989	safb	64	39.465	ENSPANG00000007770	SAFB	90	41.503	Papio_anubis
ENSORLG00000016989	safb	99	57.517	ENSPKIG00000009902	safb	98	59.885	Paramormyrops_kingsleyae
ENSORLG00000016989	safb	98	44.184	ENSPSIG00000009367	-	91	45.195	Pelodiscus_sinensis
ENSORLG00000016989	safb	98	43.830	ENSPSIG00000011679	-	92	47.215	Pelodiscus_sinensis
ENSORLG00000016989	safb	100	67.442	ENSPFOG00000007745	safb	98	68.045	Poecilia_formosa
ENSORLG00000016989	safb	100	64.202	ENSPLAG00000001614	safb	98	65.108	Poecilia_latipinna
ENSORLG00000016989	safb	100	67.319	ENSPMEG00000021023	safb	99	67.363	Poecilia_mexicana
ENSORLG00000016989	safb	100	65.542	ENSPREG00000012496	safb	98	66.502	Poecilia_reticulata
ENSORLG00000016989	safb	66	39.365	ENSPPYG00000009428	SAFB	89	41.427	Pongo_abelii
ENSORLG00000016989	safb	64	37.583	ENSPCAG00000006475	SAFB	88	40.332	Procavia_capensis
ENSORLG00000016989	safb	95	40.069	ENSPCOG00000014090	SAFB	89	40.508	Propithecus_coquereli
ENSORLG00000016989	safb	71	52.727	ENSPVAG00000004913	SAFB	64	52.727	Pteropus_vampyrus
ENSORLG00000016989	safb	99	57.780	ENSPNAG00000021838	safb	97	59.572	Pygocentrus_nattereri
ENSORLG00000016989	safb	64	41.844	ENSRBIG00000042509	SAFB	86	43.355	Rhinopithecus_bieti
ENSORLG00000016989	safb	64	40.266	ENSRROG00000029278	SAFB	90	42.087	Rhinopithecus_roxellana
ENSORLG00000016989	safb	66	40.800	ENSSBOG00000026291	SAFB	90	42.494	Saimiri_boliviensis_boliviensis
ENSORLG00000016989	safb	99	56.897	ENSSFOG00015008156	safb	97	58.030	Scleropages_formosus
ENSORLG00000016989	safb	100	73.872	ENSSMAG00000009316	safb	98	74.241	Scophthalmus_maximus
ENSORLG00000016989	safb	100	71.223	ENSSDUG00000009652	safb	98	72.147	Seriola_dumerili
ENSORLG00000016989	safb	100	75.388	ENSSLDG00000001670	safb	98	76.161	Seriola_lalandi_dorsalis
ENSORLG00000016989	safb	60	39.789	ENSSARG00000010475	SAFB	92	40.887	Sorex_araneus
ENSORLG00000016989	safb	53	39.960	ENSSPUG00000009747	-	96	38.402	Sphenodon_punctatus
ENSORLG00000016989	safb	51	40.546	ENSSPUG00000009820	-	94	45.372	Sphenodon_punctatus
ENSORLG00000016989	safb	99	69.073	ENSSPAG00000015682	safb	98	69.828	Stegastes_partitus
ENSORLG00000016989	safb	65	42.529	ENSTGUG00000000502	-	94	44.740	Taeniopygia_guttata
ENSORLG00000016989	safb	64	43.289	ENSTGUG00000000489	-	96	46.262	Taeniopygia_guttata
ENSORLG00000016989	safb	100	71.138	ENSTRUG00000003567	safb	98	71.324	Takifugu_rubripes
ENSORLG00000016989	safb	90	60.097	ENSTNIG00000015470	safb	100	60.658	Tetraodon_nigroviridis
ENSORLG00000016989	safb	65	75.000	ENSTTRG00000013588	SAFB	57	75.000	Tursiops_truncatus
ENSORLG00000016989	safb	76	41.071	ENSUMAG00000009734	SAFB	85	42.470	Ursus_maritimus
ENSORLG00000016989	safb	66	40.968	ENSVVUG00000013720	SAFB	77	43.509	Vulpes_vulpes
ENSORLG00000016989	safb	64	42.833	ENSXETG00000008755	safb	95	45.131	Xenopus_tropicalis
ENSORLG00000016989	safb	100	67.809	ENSXMAG00000003458	safb	98	68.045	Xiphophorus_maculatus