EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000017171 (Gene tree)
Gene ID
101162115
Gene Symbol
-
Alias
-
Full Name
calreticulin
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Minus strand
Length
3704 bases
Position
chr4:31378866-31382569
Accession
101162115
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000021484CalreticulinPF00262.184.2e-6412
ENSORLP00000021484CalreticulinPF00262.184.2e-6422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000021485-1122XM_023954580ENSORLP00000021484373 (aa)XP_023810348H2MRV1
Gene Model
Click here to download ENSORLG00000017171's gene model file
Pathways
Pathway IDPathway NameSource
ola04141Protein processing in endoplasmic reticulumKEGG
ola04145PhagosomeKEGG
ola05168Herpes simplex virus 1 infectionKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000017171's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000017171-6939.667ENSORLG00000018595canx6634.596
ENSORLG00000017171-8863.492ENSORLG00000018011calr3b8764.365
ENSORLG00000017171-8562.912ENSORLG00000002923-8762.983
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000017171-8873.615ENSAMXG00000018577-8672.452Astyanax_mexicanus
ENSORLG00000017171-8069.653ENSCAFG00000017093CALR8967.956Canis_familiaris
ENSORLG00000017171-8468.320ENSCPBG00000023916-8572.293Chrysemys_picta_bellii
ENSORLG00000017171-8364.345ENSDARG00000103979calr3a8664.624Danio_rerio
ENSORLG00000017171-8660.270FBgn0005585Calr8759.551Drosophila_melanogaster
ENSORLG00000017171-8460.221ENSEBUG00000008568calr3a8458.840Eptatretus_burgeri
ENSORLG00000017171-8466.022ENSELUG00000008294-8666.022Esox_lucius
ENSORLG00000017171-8973.753ENSFHEG00000000123-8571.892Fundulus_heteroclitus
ENSORLG00000017171-8480.110ENSMAMG00000003716-8479.558Mastacembelus_armatus
ENSORLG00000017171-8478.297ENSMMOG00000020031-8287.619Mola_mola
ENSORLG00000017171-8069.653ENSMLUG00000012776-8767.956Myotis_lucifugus
ENSORLG00000017171-8483.978ENSOMEG00000010424-8583.978Oryzias_melastigma
ENSORLG00000017171-7671.343ENSPSIG00000012928-8571.257Pelodiscus_sinensis
ENSORLG00000017171-7540.432ENSPSIG00000003895-5639.815Pelodiscus_sinensis
ENSORLG00000017171-8484.395ENSPNAG00000016813-8484.395Pygocentrus_nattereri
ENSORLG00000017171-8861.640ENSSMAG00000005047calr3a8354.972Scophthalmus_maximus
ENSORLG00000017171-7439.172ENSSLDG00000020527-5439.297Seriola_lalandi_dorsalis
ENSORLG00000017171-8485.987ENSTRUG00000004597-8285.987Takifugu_rubripes
ENSORLG00000017171-8464.738ENSXETG00000007937calr8764.641Xenopus_tropicalis

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