EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000017208 (Gene tree)
Gene ID: 101158398
Gene Symbol: ssb
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 11132 bases
Position: chr21:21746796-21757927
Accession: 101158398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000021533	RRM_1	PF00076.22	2.2e-11	1	1
ENSORLP00000037410	RRM_1	PF00076.22	2.5e-11	1	1
ENSORLP00000021533	RRM_3	PF08777.11	4.1e-28	1	1
ENSORLP00000037410	RRM_3	PF08777.11	4.6e-28	1	1
ENSORLP00000021533	La	PF05383.17	1.6e-19	1	1
ENSORLP00000037410	La	PF05383.17	1.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000046653	-	4944	-	ENSORLP00000037410	426 (aa)	-	-
ENSORLT00000021534	-	4833	XM_004081746	ENSORLP00000021533	400 (aa)	XP_004081794	H2MRZ9

Gene Model

Click here to download ENSORLG00000017208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000017208's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000017208	ssb	100	57.702	ENSG00000138385	SSB	98	69.492	Homo_sapiens
ENSORLG00000017208	ssb	100	81.750	ENSAPOG00000003448	ssb	100	81.750	Acanthochromis_polyacanthus
ENSORLG00000017208	ssb	100	55.609	ENSAMEG00000010507	SSB	99	55.609	Ailuropoda_melanoleuca
ENSORLG00000017208	ssb	93	79.893	ENSACIG00000001738	ssb	97	79.088	Amphilophus_citrinellus
ENSORLG00000017208	ssb	100	82.000	ENSAOCG00000020398	ssb	100	82.000	Amphiprion_ocellaris
ENSORLG00000017208	ssb	100	82.500	ENSAPEG00000020395	ssb	100	82.500	Amphiprion_percula
ENSORLG00000017208	ssb	100	82.500	ENSATEG00000016884	ssb	100	82.500	Anabas_testudineus
ENSORLG00000017208	ssb	100	53.664	ENSAPLG00000006109	SSB	99	53.791	Anas_platyrhynchos
ENSORLG00000017208	ssb	100	55.961	ENSACAG00000017008	SSB	99	55.718	Anolis_carolinensis
ENSORLG00000017208	ssb	100	52.217	ENSANAG00000027195	-	99	52.463	Aotus_nancymaae
ENSORLG00000017208	ssb	100	76.309	ENSACLG00000010798	ssb	100	75.561	Astatotilapia_calliptera
ENSORLG00000017208	ssb	100	61.220	ENSAMXG00000012606	ssb	100	62.195	Astyanax_mexicanus
ENSORLG00000017208	ssb	100	58.519	ENSBTAG00000008716	SSB	99	58.272	Bos_taurus
ENSORLG00000017208	ssb	75	34.314	WBGene00016653	C44E4.4	76	34.641	Caenorhabditis_elegans
ENSORLG00000017208	ssb	100	58.374	ENSCJAG00000045073	SSB	99	58.128	Callithrix_jacchus
ENSORLG00000017208	ssb	100	57.740	ENSCAFG00000012418	SSB	99	57.494	Canis_familiaris
ENSORLG00000017208	ssb	100	57.740	ENSCAFG00020002900	SSB	99	57.494	Canis_lupus_dingo
ENSORLG00000017208	ssb	100	57.882	ENSCHIG00000022624	-	99	57.635	Capra_hircus
ENSORLG00000017208	ssb	100	54.568	ENSCHIG00000022196	-	99	53.563	Capra_hircus
ENSORLG00000017208	ssb	99	57.531	ENSTSYG00000000097	SSB	99	57.284	Carlito_syrichta
ENSORLG00000017208	ssb	100	58.374	ENSCPOG00000003338	SSB	99	58.128	Cavia_porcellus
ENSORLG00000017208	ssb	100	59.113	ENSCCAG00000035147	SSB	99	58.867	Cebus_capucinus
ENSORLG00000017208	ssb	72	54.639	ENSCATG00000036701	SSB	83	54.296	Cercocebus_atys
ENSORLG00000017208	ssb	99	43.890	ENSCATG00000042909	-	98	43.641	Cercocebus_atys
ENSORLG00000017208	ssb	100	57.882	ENSCLAG00000015617	-	99	57.635	Chinchilla_lanigera
ENSORLG00000017208	ssb	97	54.103	ENSCSAG00000018390	-	97	53.846	Chlorocebus_sabaeus
ENSORLG00000017208	ssb	100	58.374	ENSCSAG00000015200	SSB	88	58.128	Chlorocebus_sabaeus
ENSORLG00000017208	ssb	100	57.882	ENSCHOG00000007763	SSB	99	57.635	Choloepus_hoffmanni
ENSORLG00000017208	ssb	100	59.268	ENSCPBG00000006519	SSB	99	59.268	Chrysemys_picta_bellii
ENSORLG00000017208	ssb	96	46.494	ENSCANG00000028838	-	91	46.234	Colobus_angolensis_palliatus
ENSORLG00000017208	ssb	100	51.358	ENSCANG00000033240	-	99	51.358	Colobus_angolensis_palliatus
ENSORLG00000017208	ssb	100	58.621	ENSCANG00000027695	SSB	99	58.374	Colobus_angolensis_palliatus
ENSORLG00000017208	ssb	100	53.071	ENSCGRG00001024831	Ssb	99	53.317	Cricetulus_griseus_chok1gshd
ENSORLG00000017208	ssb	100	53.071	ENSCGRG00000005387	Ssb	99	53.317	Cricetulus_griseus_crigri
ENSORLG00000017208	ssb	99	80.151	ENSCSEG00000011599	ssb	99	80.151	Cynoglossus_semilaevis
ENSORLG00000017208	ssb	100	82.294	ENSCVAG00000021558	ssb	100	82.294	Cyprinodon_variegatus
ENSORLG00000017208	ssb	100	61.975	ENSDARG00000029252	ssb	100	62.469	Danio_rerio
ENSORLG00000017208	ssb	100	58.621	ENSDNOG00000013450	SSB	99	58.374	Dasypus_novemcinctus
ENSORLG00000017208	ssb	100	53.140	ENSDORG00000005543	Ssb	99	54.054	Dipodomys_ordii
ENSORLG00000017208	ssb	85	33.333	FBgn0011638	La	77	35.331	Drosophila_melanogaster
ENSORLG00000017208	ssb	51	61.881	ENSETEG00000004614	-	52	61.881	Echinops_telfairi
ENSORLG00000017208	ssb	99	43.860	ENSEBUG00000001237	ssb	96	44.529	Eptatretus_burgeri
ENSORLG00000017208	ssb	100	58.374	ENSEASG00005022835	SSB	99	58.128	Equus_asinus_asinus
ENSORLG00000017208	ssb	100	58.374	ENSECAG00000018495	SSB	99	58.128	Equus_caballus
ENSORLG00000017208	ssb	76	50.000	ENSEEUG00000008077	SSB	78	50.000	Erinaceus_europaeus
ENSORLG00000017208	ssb	100	68.317	ENSELUG00000020929	ssb	100	66.832	Esox_lucius
ENSORLG00000017208	ssb	100	58.968	ENSFCAG00000011601	SSB	99	58.722	Felis_catus
ENSORLG00000017208	ssb	99	56.265	ENSFALG00000000930	SSB	99	56.511	Ficedula_albicollis
ENSORLG00000017208	ssb	100	58.128	ENSFDAG00000000598	SSB	99	57.882	Fukomys_damarensis
ENSORLG00000017208	ssb	74	73.510	ENSFHEG00000003268	ssb	95	74.351	Fundulus_heteroclitus
ENSORLG00000017208	ssb	99	69.900	ENSGMOG00000002664	ssb	100	69.900	Gadus_morhua
ENSORLG00000017208	ssb	99	56.968	ENSGALG00000009677	SSB	99	56.127	Gallus_gallus
ENSORLG00000017208	ssb	100	80.893	ENSGAFG00000002749	ssb	100	80.893	Gambusia_affinis
ENSORLG00000017208	ssb	100	76.601	ENSGACG00000005107	ssb	100	76.601	Gasterosteus_aculeatus
ENSORLG00000017208	ssb	100	58.537	ENSGAGG00000007807	SSB	99	58.780	Gopherus_agassizii
ENSORLG00000017208	ssb	54	52.941	ENSGGOG00000023471	-	89	52.489	Gorilla_gorilla
ENSORLG00000017208	ssb	100	50.246	ENSGGOG00000024891	-	99	50.246	Gorilla_gorilla
ENSORLG00000017208	ssb	100	76.309	ENSHBUG00000006584	ssb	100	75.561	Haplochromis_burtoni
ENSORLG00000017208	ssb	100	57.282	ENSHGLG00000017580	-	99	56.934	Heterocephalus_glaber_female
ENSORLG00000017208	ssb	100	52.088	ENSHGLG00000004478	-	99	51.597	Heterocephalus_glaber_female
ENSORLG00000017208	ssb	100	52.854	ENSHGLG00000005832	-	99	52.605	Heterocephalus_glaber_female
ENSORLG00000017208	ssb	100	57.282	ENSHGLG00100003084	-	99	56.934	Heterocephalus_glaber_male
ENSORLG00000017208	ssb	100	52.228	ENSHGLG00100008767	-	99	51.861	Heterocephalus_glaber_male
ENSORLG00000017208	ssb	99	73.737	ENSHCOG00000019011	ssb	99	74.747	Hippocampus_comes
ENSORLG00000017208	ssb	100	63.260	ENSIPUG00000003681	SSB	100	63.260	Ictalurus_punctatus
ENSORLG00000017208	ssb	100	57.882	ENSSTOG00000008416	SSB	99	56.897	Ictidomys_tridecemlineatus
ENSORLG00000017208	ssb	89	47.765	ENSJJAG00000016250	-	94	47.486	Jaculus_jaculus
ENSORLG00000017208	ssb	100	51.429	ENSJJAG00000023158	-	99	51.429	Jaculus_jaculus
ENSORLG00000017208	ssb	100	80.500	ENSKMAG00000017317	ssb	100	80.500	Kryptolebias_marmoratus
ENSORLG00000017208	ssb	100	79.750	ENSLBEG00000017345	ssb	100	79.750	Labrus_bergylta
ENSORLG00000017208	ssb	100	53.545	ENSLACG00000014056	SSB	99	53.790	Latimeria_chalumnae
ENSORLG00000017208	ssb	100	62.899	ENSLOCG00000007933	ssb	99	63.145	Lepisosteus_oculatus
ENSORLG00000017208	ssb	74	45.455	ENSLAFG00000026721	-	97	45.455	Loxodonta_africana
ENSORLG00000017208	ssb	100	50.370	ENSLAFG00000028909	-	99	49.877	Loxodonta_africana
ENSORLG00000017208	ssb	100	53.919	ENSLAFG00000000867	-	99	54.632	Loxodonta_africana
ENSORLG00000017208	ssb	90	51.247	ENSMFAG00000041478	-	91	53.495	Macaca_fascicularis
ENSORLG00000017208	ssb	100	58.374	ENSMFAG00000039066	SSB	99	58.128	Macaca_fascicularis
ENSORLG00000017208	ssb	100	50.985	ENSMMUG00000011724	-	97	50.246	Macaca_mulatta
ENSORLG00000017208	ssb	100	58.374	ENSMMUG00000023051	SSB	99	58.128	Macaca_mulatta
ENSORLG00000017208	ssb	99	42.394	ENSMMUG00000039889	-	98	42.145	Macaca_mulatta
ENSORLG00000017208	ssb	100	49.756	ENSMNEG00000028321	SSB	85	67.826	Macaca_nemestrina
ENSORLG00000017208	ssb	90	51.247	ENSMNEG00000034698	-	91	53.495	Macaca_nemestrina
ENSORLG00000017208	ssb	100	41.235	ENSMLEG00000042644	-	99	40.247	Mandrillus_leucophaeus
ENSORLG00000017208	ssb	100	58.374	ENSMLEG00000035717	SSB	99	58.128	Mandrillus_leucophaeus
ENSORLG00000017208	ssb	100	81.250	ENSMAMG00000004800	ssb	100	81.250	Mastacembelus_armatus
ENSORLG00000017208	ssb	100	76.309	ENSMZEG00005005749	ssb	100	75.561	Maylandia_zebra
ENSORLG00000017208	ssb	99	56.724	ENSMGAG00000010328	SSB	100	61.353	Meleagris_gallopavo
ENSORLG00000017208	ssb	98	53.671	ENSMICG00000033304	-	99	53.250	Microcebus_murinus
ENSORLG00000017208	ssb	100	58.374	ENSMICG00000028252	-	99	58.128	Microcebus_murinus
ENSORLG00000017208	ssb	100	54.964	ENSMODG00000008227	-	99	54.015	Monodelphis_domestica
ENSORLG00000017208	ssb	100	46.798	ENSMODG00000007027	-	99	46.305	Monodelphis_domestica
ENSORLG00000017208	ssb	100	48.148	ENSMODG00000019271	-	99	47.901	Monodelphis_domestica
ENSORLG00000017208	ssb	94	73.881	ENSMALG00000008045	ssb	99	73.966	Monopterus_albus
ENSORLG00000017208	ssb	100	53.349	MGP_CAROLIEiJ_G0023629	-	98	64.103	Mus_caroli
ENSORLG00000017208	ssb	100	53.589	ENSMUSG00000068882	Ssb	98	64.103	Mus_musculus
ENSORLG00000017208	ssb	100	53.606	MGP_PahariEiJ_G0025081	-	98	63.462	Mus_pahari
ENSORLG00000017208	ssb	100	53.589	MGP_SPRETEiJ_G0024551	Ssb	98	64.103	Mus_spretus
ENSORLG00000017208	ssb	100	58.128	ENSMPUG00000000785	SSB	99	57.882	Mustela_putorius_furo
ENSORLG00000017208	ssb	100	57.349	ENSMLUG00000016316	SSB	99	57.108	Myotis_lucifugus
ENSORLG00000017208	ssb	100	76.060	ENSNBRG00000012661	ssb	100	75.312	Neolamprologus_brichardi
ENSORLG00000017208	ssb	100	58.128	ENSNLEG00000004958	SSB	99	57.882	Nomascus_leucogenys
ENSORLG00000017208	ssb	85	47.230	ENSNLEG00000028754	-	78	48.328	Nomascus_leucogenys
ENSORLG00000017208	ssb	62	62.000	ENSMEUG00000001650	-	100	62.000	Notamacropus_eugenii
ENSORLG00000017208	ssb	51	58.599	ENSOPRG00000008475	-	54	58.599	Ochotona_princeps
ENSORLG00000017208	ssb	94	56.800	ENSODEG00000004202	-	99	56.000	Octodon_degus
ENSORLG00000017208	ssb	100	78.055	ENSONIG00000008776	ssb	100	77.307	Oreochromis_niloticus
ENSORLG00000017208	ssb	100	56.404	ENSOANG00000008543	SSB	99	56.158	Ornithorhynchus_anatinus
ENSORLG00000017208	ssb	100	57.882	ENSOCUG00000010396	SSB	99	57.635	Oryctolagus_cuniculus
ENSORLG00000017208	ssb	100	99.252	ENSORLG00020022574	ssb	100	99.252	Oryzias_latipes_hni
ENSORLG00000017208	ssb	100	99.250	ENSORLG00015016592	ssb	100	99.250	Oryzias_latipes_hsok
ENSORLG00000017208	ssb	100	86.035	ENSOMEG00000003193	ssb	100	87.531	Oryzias_melastigma
ENSORLG00000017208	ssb	100	53.919	ENSOGAG00000029768	SSB	99	53.682	Otolemur_garnettii
ENSORLG00000017208	ssb	100	57.882	ENSOARG00000002906	SSB	99	57.635	Ovis_aries
ENSORLG00000017208	ssb	100	50.246	ENSPPAG00000032427	-	100	60.465	Pan_paniscus
ENSORLG00000017208	ssb	100	57.702	ENSPPAG00000042673	SSB	99	57.457	Pan_paniscus
ENSORLG00000017208	ssb	87	50.571	ENSPPAG00000006189	-	89	49.714	Pan_paniscus
ENSORLG00000017208	ssb	100	58.968	ENSPPRG00000006599	SSB	99	58.722	Panthera_pardus
ENSORLG00000017208	ssb	100	58.968	ENSPTIG00000011021	SSB	97	58.722	Panthera_tigris_altaica
ENSORLG00000017208	ssb	100	48.522	ENSPTRG00000042880	-	99	48.522	Pan_troglodytes
ENSORLG00000017208	ssb	100	57.702	ENSPTRG00000012620	SSB	99	57.457	Pan_troglodytes
ENSORLG00000017208	ssb	99	42.145	ENSPANG00000034126	-	98	39.623	Papio_anubis
ENSORLG00000017208	ssb	100	58.374	ENSPANG00000007440	SSB	99	58.128	Papio_anubis
ENSORLG00000017208	ssb	96	41.495	ENSPANG00000031877	-	91	40.722	Papio_anubis
ENSORLG00000017208	ssb	100	66.418	ENSPKIG00000019325	ssb	99	66.418	Paramormyrops_kingsleyae
ENSORLG00000017208	ssb	100	59.268	ENSPSIG00000002265	SSB	93	59.268	Pelodiscus_sinensis
ENSORLG00000017208	ssb	80	70.846	ENSPMGG00000020075	ssb	99	63.325	Periophthalmus_magnuspinnatus
ENSORLG00000017208	ssb	98	43.897	ENSPMAG00000002982	ssb	99	43.692	Petromyzon_marinus
ENSORLG00000017208	ssb	95	56.995	ENSPCIG00000028591	-	99	56.650	Phascolarctos_cinereus
ENSORLG00000017208	ssb	100	80.750	ENSPFOG00000009650	ssb	100	80.750	Poecilia_formosa
ENSORLG00000017208	ssb	100	80.750	ENSPLAG00000020498	ssb	100	80.750	Poecilia_latipinna
ENSORLG00000017208	ssb	100	80.500	ENSPMEG00000001051	ssb	100	80.500	Poecilia_mexicana
ENSORLG00000017208	ssb	93	81.989	ENSPREG00000003708	ssb	98	81.600	Poecilia_reticulata
ENSORLG00000017208	ssb	100	58.128	ENSPPYG00000012919	SSB	99	57.882	Pongo_abelii
ENSORLG00000017208	ssb	95	56.250	ENSPCAG00000010276	SSB	99	56.250	Procavia_capensis
ENSORLG00000017208	ssb	100	56.158	ENSPCOG00000015741	-	92	65.517	Propithecus_coquereli
ENSORLG00000017208	ssb	100	51.724	ENSPCOG00000023189	-	99	51.478	Propithecus_coquereli
ENSORLG00000017208	ssb	89	59.218	ENSPVAG00000006615	SSB	100	58.659	Pteropus_vampyrus
ENSORLG00000017208	ssb	100	76.309	ENSPNYG00000006444	ssb	100	75.561	Pundamilia_nyererei
ENSORLG00000017208	ssb	100	62.195	ENSPNAG00000011708	ssb	100	62.439	Pygocentrus_nattereri
ENSORLG00000017208	ssb	100	53.580	ENSRNOG00000011606	AABR07061825.1	99	53.086	Rattus_norvegicus
ENSORLG00000017208	ssb	100	53.237	ENSRNOG00000007998	Ssb	99	51.675	Rattus_norvegicus
ENSORLG00000017208	ssb	99	42.040	ENSRBIG00000029918	-	98	41.791	Rhinopithecus_bieti
ENSORLG00000017208	ssb	94	50.132	ENSRBIG00000041232	-	98	49.868	Rhinopithecus_bieti
ENSORLG00000017208	ssb	100	50.488	ENSRBIG00000041972	SSB	88	67.826	Rhinopithecus_bieti
ENSORLG00000017208	ssb	87	55.143	ENSRBIG00000041608	-	94	52.857	Rhinopithecus_bieti
ENSORLG00000017208	ssb	87	57.143	ENSRROG00000034102	-	96	52.393	Rhinopithecus_roxellana
ENSORLG00000017208	ssb	98	50.253	ENSRROG00000031684	-	99	50.000	Rhinopithecus_roxellana
ENSORLG00000017208	ssb	100	58.621	ENSRROG00000040346	SSB	99	58.374	Rhinopithecus_roxellana
ENSORLG00000017208	ssb	99	47.761	ENSRROG00000007149	-	98	47.512	Rhinopithecus_roxellana
ENSORLG00000017208	ssb	50	30.476	YDL051W	LHP1	73	30.476	Saccharomyces_cerevisiae
ENSORLG00000017208	ssb	100	58.867	ENSSBOG00000027204	SSB	99	58.621	Saimiri_boliviensis_boliviensis
ENSORLG00000017208	ssb	100	55.774	ENSSHAG00000018062	SSB	99	56.650	Sarcophilus_harrisii
ENSORLG00000017208	ssb	100	65.271	ENSSFOG00015000550	ssb	99	66.010	Scleropages_formosus
ENSORLG00000017208	ssb	100	76.500	ENSSMAG00000013885	ssb	99	80.645	Scophthalmus_maximus
ENSORLG00000017208	ssb	100	83.250	ENSSDUG00000020117	ssb	100	83.250	Seriola_dumerili
ENSORLG00000017208	ssb	100	79.500	ENSSLDG00000002525	ssb	100	79.250	Seriola_lalandi_dorsalis
ENSORLG00000017208	ssb	95	53.125	ENSSARG00000007747	SSB	99	52.604	Sorex_araneus
ENSORLG00000017208	ssb	100	57.843	ENSSPUG00000012112	SSB	99	56.355	Sphenodon_punctatus
ENSORLG00000017208	ssb	100	80.500	ENSSPAG00000005696	ssb	100	80.500	Stegastes_partitus
ENSORLG00000017208	ssb	94	55.145	ENSSSCG00000015938	SSB	93	54.090	Sus_scrofa
ENSORLG00000017208	ssb	95	57.069	ENSTGUG00000007942	SSB	99	56.724	Taeniopygia_guttata
ENSORLG00000017208	ssb	100	76.000	ENSTRUG00000017839	ssb	100	77.250	Takifugu_rubripes
ENSORLG00000017208	ssb	92	76.294	ENSTNIG00000000915	ssb	91	81.790	Tetraodon_nigroviridis
ENSORLG00000017208	ssb	82	67.826	ENSTBEG00000009056	SSB	81	67.826	Tupaia_belangeri
ENSORLG00000017208	ssb	100	58.722	ENSTTRG00000002152	SSB	99	58.477	Tursiops_truncatus
ENSORLG00000017208	ssb	94	58.421	ENSUAMG00000027833	SSB	99	58.158	Ursus_americanus
ENSORLG00000017208	ssb	100	57.494	ENSUMAG00000013907	SSB	99	57.248	Ursus_maritimus
ENSORLG00000017208	ssb	100	58.663	ENSVPAG00000007183	SSB	99	58.416	Vicugna_pacos
ENSORLG00000017208	ssb	100	57.740	ENSVVUG00000016573	SSB	77	57.494	Vulpes_vulpes
ENSORLG00000017208	ssb	99	52.103	ENSXETG00000025402	ssb	99	52.103	Xenopus_tropicalis
ENSORLG00000017208	ssb	93	77.151	ENSXCOG00000019109	ssb	93	82.540	Xiphophorus_couchianus
ENSORLG00000017208	ssb	100	78.908	ENSXMAG00000004888	ssb	100	78.908	Xiphophorus_maculatus