EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000017237 (Gene tree)
Gene ID: 100049295
Gene Symbol: sub1
Alias: -
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 2545 bases
Position: chr9:30256948-30259492
Accession: 100049295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000021569	PC4	PF02229.16	4.8e-26	1	1
ENSORLP00000041189	PC4	PF02229.16	4.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000021570	-	1319	XM_011479499	ENSORLP00000021569	125 (aa)	XP_011477801	H2MS35
ENSORLT00000038388	-	2108	-	ENSORLP00000041189	125 (aa)	-	Q68Y58

Gene Model

Click here to download ENSORLG00000017237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000017237's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000017237	sub1	100	76.984	ENSAMXG00000038560	-	100	76.984	Astyanax_mexicanus
ENSORLG00000017237	sub1	99	52.000	ENSCPBG00000010898	-	99	48.000	Chrysemys_picta_bellii
ENSORLG00000017237	sub1	99	42.742	ENSCING00000017560	-	51	55.556	Ciona_intestinalis
ENSORLG00000017237	sub1	100	83.200	ENSCSEG00000009205	-	99	83.871	Cynoglossus_semilaevis
ENSORLG00000017237	sub1	100	80.800	ENSCSEG00000011154	-	99	81.452	Cynoglossus_semilaevis
ENSORLG00000017237	sub1	98	88.618	ENSCVAG00000021573	-	72	88.618	Cyprinodon_variegatus
ENSORLG00000017237	sub1	54	74.627	ENSDORG00000026076	-	99	61.111	Dipodomys_ordii
ENSORLG00000017237	sub1	71	35.955	FBgn0015299	Ssb-c31a	50	41.071	Drosophila_melanogaster
ENSORLG00000017237	sub1	98	77.344	ENSELUG00000005136	TCP4	98	74.219	Esox_lucius
ENSORLG00000017237	sub1	100	78.295	ENSELUG00000022688	sub1	99	78.906	Esox_lucius
ENSORLG00000017237	sub1	99	80.645	ENSGMOG00000011659	-	99	80.645	Gadus_morhua
ENSORLG00000017237	sub1	100	87.200	ENSGAFG00000016251	-	99	87.903	Gambusia_affinis
ENSORLG00000017237	sub1	100	88.000	ENSKMAG00000013670	-	99	88.710	Kryptolebias_marmoratus
ENSORLG00000017237	sub1	100	89.600	ENSMMOG00000008698	-	100	89.600	Mola_mola
ENSORLG00000017237	sub1	75	67.021	ENSNGAG00000001935	-	68	67.021	Nannospalax_galili
ENSORLG00000017237	sub1	99	59.200	ENSODEG00000004776	-	99	59.200	Octodon_degus
ENSORLG00000017237	sub1	100	90.400	ENSONIG00000013958	-	99	91.129	Oreochromis_niloticus
ENSORLG00000017237	sub1	100	100.000	ENSORLG00020014865	sub1	100	100.000	Oryzias_latipes_hni
ENSORLG00000017237	sub1	100	100.000	ENSORLG00015005820	sub1	100	100.000	Oryzias_latipes_hsok
ENSORLG00000017237	sub1	100	96.800	ENSOMEG00000003351	-	100	96.800	Oryzias_melastigma
ENSORLG00000017237	sub1	100	85.827	ENSPMGG00000017654	-	100	85.039	Periophthalmus_magnuspinnatus
ENSORLG00000017237	sub1	100	87.200	ENSPFOG00000017101	-	99	87.903	Poecilia_formosa
ENSORLG00000017237	sub1	100	87.200	ENSPLAG00000015088	-	99	87.903	Poecilia_latipinna
ENSORLG00000017237	sub1	100	87.200	ENSPMEG00000023692	-	99	87.903	Poecilia_mexicana
ENSORLG00000017237	sub1	100	87.200	ENSPREG00000011918	-	99	87.903	Poecilia_reticulata
ENSORLG00000017237	sub1	100	88.000	ENSXCOG00000009356	-	99	88.710	Xiphophorus_couchianus
ENSORLG00000017237	sub1	100	88.000	ENSXMAG00000013353	-	99	88.710	Xiphophorus_maculatus