EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000017243 (Gene tree)
Gene ID: 101166968
Gene Symbol: zfr
Alias: -
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 21980 bases
Position: chr9:30259560-30281539
Accession: 101166968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000021576	DZF	PF07528.14	7.5e-72	1	1
ENSORLP00000032722	DZF	PF07528.14	7.9e-72	1	1
ENSORLP00000021576	zf-met	PF12874.7	2.3e-21	1	3
ENSORLP00000021576	zf-met	PF12874.7	2.3e-21	2	3
ENSORLP00000021576	zf-met	PF12874.7	2.3e-21	3	3
ENSORLP00000032722	zf-met	PF12874.7	2.5e-21	1	3
ENSORLP00000032722	zf-met	PF12874.7	2.5e-21	2	3
ENSORLP00000032722	zf-met	PF12874.7	2.5e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000021577	-	3105	-	ENSORLP00000021576	1034 (aa)	-	H2MS41
ENSORLT00000043224	-	5107	XM_023958824	ENSORLP00000032722	1064 (aa)	XP_023814592	UPI0009DB1D66

Gene Model

Click here to download ENSORLG00000017243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000017243's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000017243	zfr	96	51.052	ENSORLG00000017438	zfr2	99	50.233

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000017243	zfr	99	75.574	ENSG00000056097	ZFR	99	76.217	Homo_sapiens
ENSORLG00000017243	zfr	99	81.853	ENSAPOG00000009740	zfr	99	82.514	Acanthochromis_polyacanthus
ENSORLG00000017243	zfr	99	75.668	ENSAMEG00000006184	ZFR	99	76.045	Ailuropoda_melanoleuca
ENSORLG00000017243	zfr	93	92.818	ENSACIG00000015926	zfr	82	85.262	Amphilophus_citrinellus
ENSORLG00000017243	zfr	99	82.391	ENSAOCG00000013876	zfr	99	83.503	Amphiprion_ocellaris
ENSORLG00000017243	zfr	99	86.006	ENSAPEG00000024383	zfr	99	86.932	Amphiprion_percula
ENSORLG00000017243	zfr	99	86.791	ENSATEG00000010271	zfr	99	87.163	Anabas_testudineus
ENSORLG00000017243	zfr	78	70.504	ENSAPLG00000015627	-	100	71.703	Anas_platyrhynchos
ENSORLG00000017243	zfr	99	74.674	ENSACAG00000007880	ZFR	99	75.023	Anolis_carolinensis
ENSORLG00000017243	zfr	99	75.666	ENSANAG00000023333	ZFR	99	76.309	Aotus_nancymaae
ENSORLG00000017243	zfr	93	92.818	ENSACLG00000016832	zfr	82	85.140	Astatotilapia_calliptera
ENSORLG00000017243	zfr	98	81.056	ENSAMXG00000019511	zfr	99	81.998	Astyanax_mexicanus
ENSORLG00000017243	zfr	99	75.853	ENSBTAG00000008414	ZFR	99	75.952	Bos_taurus
ENSORLG00000017243	zfr	99	75.574	ENSCJAG00000018740	ZFR	99	76.217	Callithrix_jacchus
ENSORLG00000017243	zfr	99	73.989	ENSCAFG00000018886	ZFR	99	76.220	Canis_familiaris
ENSORLG00000017243	zfr	99	75.668	ENSCAFG00020016859	-	99	76.045	Canis_lupus_dingo
ENSORLG00000017243	zfr	99	75.945	ENSCHIG00000007710	ZFR	99	76.590	Capra_hircus
ENSORLG00000017243	zfr	97	74.833	ENSTSYG00000010670	ZFR	98	75.459	Carlito_syrichta
ENSORLG00000017243	zfr	96	62.076	ENSCAPG00000015655	ZFR	99	60.411	Cavia_aperea
ENSORLG00000017243	zfr	96	70.126	ENSCPOG00000000862	ZFR	99	70.029	Cavia_porcellus
ENSORLG00000017243	zfr	99	75.691	ENSCCAG00000024473	ZFR	99	76.335	Cebus_capucinus
ENSORLG00000017243	zfr	99	75.574	ENSCATG00000038311	ZFR	99	76.217	Cercocebus_atys
ENSORLG00000017243	zfr	97	74.644	ENSCLAG00000007408	ZFR	99	75.215	Chinchilla_lanigera
ENSORLG00000017243	zfr	99	75.574	ENSCSAG00000017180	ZFR	99	76.217	Chlorocebus_sabaeus
ENSORLG00000017243	zfr	90	65.000	ENSCHOG00000003848	ZFR	94	65.000	Choloepus_hoffmanni
ENSORLG00000017243	zfr	99	76.766	ENSCPBG00000024211	ZFR	99	77.230	Chrysemys_picta_bellii
ENSORLG00000017243	zfr	99	75.482	ENSCANG00000017807	ZFR	99	76.125	Colobus_angolensis_palliatus
ENSORLG00000017243	zfr	99	75.763	ENSCGRG00001016009	Zfr	99	76.041	Cricetulus_griseus_chok1gshd
ENSORLG00000017243	zfr	98	74.436	ENSCGRG00000001228	Zfr	98	74.929	Cricetulus_griseus_crigri
ENSORLG00000017243	zfr	100	82.375	ENSCSEG00000011169	ZFR	99	82.839	Cynoglossus_semilaevis
ENSORLG00000017243	zfr	94	81.333	ENSCSEG00000009224	zfr	88	80.925	Cynoglossus_semilaevis
ENSORLG00000017243	zfr	98	83.191	ENSCVAG00000016494	zfr	100	83.207	Cyprinodon_variegatus
ENSORLG00000017243	zfr	99	80.708	ENSDARG00000027109	zfr	99	81.827	Danio_rerio
ENSORLG00000017243	zfr	99	75.531	ENSDNOG00000008852	ZFR	99	76.077	Dasypus_novemcinctus
ENSORLG00000017243	zfr	99	74.125	ENSDORG00000016643	Zfr	99	75.859	Dipodomys_ordii
ENSORLG00000017243	zfr	99	70.363	ENSETEG00000008937	ZFR	99	71.482	Echinops_telfairi
ENSORLG00000017243	zfr	52	61.679	ENSEBUG00000012503	-	97	61.525	Eptatretus_burgeri
ENSORLG00000017243	zfr	99	75.668	ENSEASG00005007104	ZFR	99	76.045	Equus_asinus_asinus
ENSORLG00000017243	zfr	82	73.737	ENSECAG00000012851	ZFR	99	74.632	Equus_caballus
ENSORLG00000017243	zfr	86	74.607	ENSEEUG00000014206	ZFR	81	78.190	Erinaceus_europaeus
ENSORLG00000017243	zfr	100	70.594	ENSELUG00000022743	zfr	99	71.918	Esox_lucius
ENSORLG00000017243	zfr	99	75.859	ENSFCAG00000000354	ZFR	99	76.137	Felis_catus
ENSORLG00000017243	zfr	99	75.653	ENSFALG00000002149	ZFR	99	76.119	Ficedula_albicollis
ENSORLG00000017243	zfr	99	75.186	ENSFDAG00000012993	ZFR	99	75.836	Fukomys_damarensis
ENSORLG00000017243	zfr	55	83.770	ENSFHEG00000012064	zfr	92	84.201	Fundulus_heteroclitus
ENSORLG00000017243	zfr	94	91.892	ENSGMOG00000003967	zfr	93	90.323	Gadus_morhua
ENSORLG00000017243	zfr	99	76.564	ENSGALG00000003235	-	99	77.218	Gallus_gallus
ENSORLG00000017243	zfr	99	77.593	ENSGALG00000034488	-	99	77.290	Gallus_gallus
ENSORLG00000017243	zfr	90	87.786	ENSGAFG00000016229	zfr	97	87.786	Gambusia_affinis
ENSORLG00000017243	zfr	99	79.817	ENSGACG00000005045	zfr	99	80.645	Gasterosteus_aculeatus
ENSORLG00000017243	zfr	95	76.424	ENSGAGG00000013544	ZFR	99	76.817	Gopherus_agassizii
ENSORLG00000017243	zfr	99	75.482	ENSGGOG00000016302	ZFR	99	76.125	Gorilla_gorilla
ENSORLG00000017243	zfr	99	75.486	ENSHGLG00000008088	ZFR	99	75.856	Heterocephalus_glaber_female
ENSORLG00000017243	zfr	96	75.169	ENSHGLG00100016776	ZFR	98	75.556	Heterocephalus_glaber_male
ENSORLG00000017243	zfr	99	82.212	ENSHCOG00000001548	zfr	99	82.472	Hippocampus_comes
ENSORLG00000017243	zfr	99	81.163	ENSIPUG00000008192	zfr	99	82.364	Ictalurus_punctatus
ENSORLG00000017243	zfr	99	75.439	ENSSTOG00000008742	ZFR	99	75.783	Ictidomys_tridecemlineatus
ENSORLG00000017243	zfr	99	68.981	ENSJJAG00000023064	Zfr	98	71.050	Jaculus_jaculus
ENSORLG00000017243	zfr	92	84.045	ENSKMAG00000009468	zfr	99	86.890	Kryptolebias_marmoratus
ENSORLG00000017243	zfr	99	87.333	ENSLBEG00000010783	zfr	99	87.512	Labrus_bergylta
ENSORLG00000017243	zfr	99	72.041	ENSLACG00000000831	ZFR	99	73.488	Latimeria_chalumnae
ENSORLG00000017243	zfr	99	80.036	ENSLOCG00000006727	zfr	99	80.668	Lepisosteus_oculatus
ENSORLG00000017243	zfr	98	75.353	ENSLAFG00000002308	ZFR	99	76.011	Loxodonta_africana
ENSORLG00000017243	zfr	99	74.656	ENSMFAG00000042691	ZFR	99	75.298	Macaca_fascicularis
ENSORLG00000017243	zfr	99	75.574	ENSMMUG00000001317	ZFR	99	76.217	Macaca_mulatta
ENSORLG00000017243	zfr	99	75.574	ENSMNEG00000029441	ZFR	99	76.217	Macaca_nemestrina
ENSORLG00000017243	zfr	99	73.297	ENSMLEG00000028503	ZFR	99	75.813	Mandrillus_leucophaeus
ENSORLG00000017243	zfr	99	85.967	ENSMAMG00000017351	zfr	99	85.502	Mastacembelus_armatus
ENSORLG00000017243	zfr	93	92.818	ENSMZEG00005021243	zfr	82	85.140	Maylandia_zebra
ENSORLG00000017243	zfr	96	63.911	ENSMGAG00000002841	ZFR	71	67.300	Meleagris_gallopavo
ENSORLG00000017243	zfr	99	75.763	ENSMAUG00000000976	Zfr	99	75.578	Mesocricetus_auratus
ENSORLG00000017243	zfr	99	75.390	ENSMICG00000001244	ZFR	99	75.671	Microcebus_murinus
ENSORLG00000017243	zfr	99	75.599	ENSMOCG00000018630	Zfr	99	75.919	Microtus_ochrogaster
ENSORLG00000017243	zfr	99	81.975	ENSMMOG00000012585	zfr	90	85.558	Mola_mola
ENSORLG00000017243	zfr	99	76.015	ENSMODG00000020412	ZFR	99	76.661	Monodelphis_domestica
ENSORLG00000017243	zfr	99	80.451	ENSMALG00000007123	zfr	94	95.161	Monopterus_albus
ENSORLG00000017243	zfr	99	75.393	MGP_CAROLIEiJ_G0019681	Zfr	100	77.517	Mus_caroli
ENSORLG00000017243	zfr	99	75.298	ENSMUSG00000022201	Zfr	100	80.966	Mus_musculus
ENSORLG00000017243	zfr	99	75.486	MGP_PahariEiJ_G0016057	Zfr	100	77.517	Mus_pahari
ENSORLG00000017243	zfr	99	75.298	MGP_SPRETEiJ_G0020574	Zfr	100	77.517	Mus_spretus
ENSORLG00000017243	zfr	73	73.058	ENSMPUG00000015193	-	99	74.051	Mustela_putorius_furo
ENSORLG00000017243	zfr	97	75.311	ENSMLUG00000011797	ZFR	99	75.862	Myotis_lucifugus
ENSORLG00000017243	zfr	99	76.059	ENSNGAG00000018328	Zfr	99	76.345	Nannospalax_galili
ENSORLG00000017243	zfr	93	92.818	ENSNBRG00000008378	zfr	82	81.288	Neolamprologus_brichardi
ENSORLG00000017243	zfr	99	72.995	ENSNLEG00000014098	ZFR	99	75.717	Nomascus_leucogenys
ENSORLG00000017243	zfr	96	70.520	ENSMEUG00000010225	ZFR	99	71.484	Notamacropus_eugenii
ENSORLG00000017243	zfr	83	81.526	ENSOPRG00000016756	ZFR	84	81.526	Ochotona_princeps
ENSORLG00000017243	zfr	96	75.264	ENSODEG00000001990	ZFR	99	75.455	Octodon_degus
ENSORLG00000017243	zfr	82	78.444	ENSONIG00000013960	zfr	73	84.241	Oreochromis_niloticus
ENSORLG00000017243	zfr	96	75.889	ENSOANG00000014434	ZFR	99	76.453	Ornithorhynchus_anatinus
ENSORLG00000017243	zfr	99	75.390	ENSOCUG00000016737	ZFR	99	75.916	Oryctolagus_cuniculus
ENSORLG00000017243	zfr	100	99.718	ENSORLG00020014823	zfr	100	99.718	Oryzias_latipes_hni
ENSORLG00000017243	zfr	100	99.530	ENSORLG00015005801	zfr	100	99.530	Oryzias_latipes_hsok
ENSORLG00000017243	zfr	100	96.071	ENSOMEG00000003336	zfr	100	96.071	Oryzias_melastigma
ENSORLG00000017243	zfr	99	73.013	ENSOGAG00000015117	ZFR	99	73.660	Otolemur_garnettii
ENSORLG00000017243	zfr	96	74.280	ENSOARG00000012233	ZFR	99	74.184	Ovis_aries
ENSORLG00000017243	zfr	97	74.644	ENSPPAG00000027447	ZFR	99	75.598	Pan_paniscus
ENSORLG00000017243	zfr	99	75.760	ENSPPRG00000008253	ZFR	99	76.137	Panthera_pardus
ENSORLG00000017243	zfr	99	73.272	ENSPTIG00000010038	ZFR	99	73.743	Panthera_tigris_altaica
ENSORLG00000017243	zfr	99	75.574	ENSPTRG00000016771	ZFR	99	76.217	Pan_troglodytes
ENSORLG00000017243	zfr	99	74.423	ENSPANG00000003729	ZFR	99	74.977	Papio_anubis
ENSORLG00000017243	zfr	99	73.193	ENSPKIG00000007596	ZFR	99	73.376	Paramormyrops_kingsleyae
ENSORLG00000017243	zfr	95	86.458	ENSPKIG00000016781	ZFR	99	80.594	Paramormyrops_kingsleyae
ENSORLG00000017243	zfr	50	82.922	ENSPSIG00000005779	ZFR	95	84.061	Pelodiscus_sinensis
ENSORLG00000017243	zfr	95	84.325	ENSPMGG00000015984	zfr	99	84.722	Periophthalmus_magnuspinnatus
ENSORLG00000017243	zfr	97	74.403	ENSPEMG00000014573	Zfr	98	74.687	Peromyscus_maniculatus_bairdii
ENSORLG00000017243	zfr	99	76.081	ENSPCIG00000020906	ZFR	99	76.725	Phascolarctos_cinereus
ENSORLG00000017243	zfr	99	84.372	ENSPFOG00000005931	zfr	100	84.744	Poecilia_formosa
ENSORLG00000017243	zfr	99	83.613	ENSPREG00000011947	zfr	100	84.171	Poecilia_reticulata
ENSORLG00000017243	zfr	96	74.857	ENSPPYG00000015378	ZFR	99	75.430	Pongo_abelii
ENSORLG00000017243	zfr	99	67.401	ENSPCAG00000007277	ZFR	99	68.548	Procavia_capensis
ENSORLG00000017243	zfr	95	75.072	ENSPCOG00000000045	ZFR	99	75.463	Propithecus_coquereli
ENSORLG00000017243	zfr	94	79.878	ENSPVAG00000004780	ZFR	94	79.878	Pteropus_vampyrus
ENSORLG00000017243	zfr	93	92.818	ENSPNYG00000006239	zfr	82	85.018	Pundamilia_nyererei
ENSORLG00000017243	zfr	99	82.282	ENSPNAG00000025151	zfr	99	83.148	Pygocentrus_nattereri
ENSORLG00000017243	zfr	99	75.393	ENSRNOG00000011627	Zfr	99	79.688	Rattus_norvegicus
ENSORLG00000017243	zfr	99	75.482	ENSRBIG00000041561	ZFR	99	76.125	Rhinopithecus_bieti
ENSORLG00000017243	zfr	99	75.482	ENSRROG00000044008	ZFR	99	76.125	Rhinopithecus_roxellana
ENSORLG00000017243	zfr	96	75.072	ENSSBOG00000024150	ZFR	99	75.551	Saimiri_boliviensis_boliviensis
ENSORLG00000017243	zfr	96	75.839	ENSSHAG00000015478	ZFR	99	76.318	Sarcophilus_harrisii
ENSORLG00000017243	zfr	99	75.852	ENSSFOG00015017300	ZFR	99	76.420	Scleropages_formosus
ENSORLG00000017243	zfr	99	84.298	ENSSMAG00000000320	zfr	99	84.665	Scophthalmus_maximus
ENSORLG00000017243	zfr	99	86.989	ENSSDUG00000013882	zfr	99	87.268	Seriola_dumerili
ENSORLG00000017243	zfr	93	85.419	ENSSLDG00000000762	zfr	99	85.298	Seriola_lalandi_dorsalis
ENSORLG00000017243	zfr	90	82.432	ENSSARG00000006571	ZFR	93	82.432	Sorex_araneus
ENSORLG00000017243	zfr	96	76.516	ENSSPUG00000016786	ZFR	99	76.214	Sphenodon_punctatus
ENSORLG00000017243	zfr	99	86.456	ENSSPAG00000019293	zfr	99	87.662	Stegastes_partitus
ENSORLG00000017243	zfr	99	75.760	ENSSSCG00000027681	ZFR	99	76.045	Sus_scrofa
ENSORLG00000017243	zfr	99	75.531	ENSTGUG00000001909	ZFR	99	75.840	Taeniopygia_guttata
ENSORLG00000017243	zfr	99	85.528	ENSTRUG00000016620	zfr	99	86.088	Takifugu_rubripes
ENSORLG00000017243	zfr	58	79.402	ENSTNIG00000018856	zfr	99	80.235	Tetraodon_nigroviridis
ENSORLG00000017243	zfr	95	71.379	ENSTBEG00000017687	ZFR	95	75.532	Tupaia_belangeri
ENSORLG00000017243	zfr	99	71.705	ENSTTRG00000017321	ZFR	99	71.773	Tursiops_truncatus
ENSORLG00000017243	zfr	78	73.214	ENSUAMG00000000172	-	99	73.929	Ursus_americanus
ENSORLG00000017243	zfr	78	73.214	ENSUMAG00000013805	-	99	74.017	Ursus_maritimus
ENSORLG00000017243	zfr	99	73.364	ENSVPAG00000011011	ZFR	99	73.445	Vicugna_pacos
ENSORLG00000017243	zfr	99	75.859	ENSVVUG00000022171	-	99	76.137	Vulpes_vulpes
ENSORLG00000017243	zfr	99	70.450	ENSXETG00000015598	zfr	99	71.013	Xenopus_tropicalis
ENSORLG00000017243	zfr	99	84.372	ENSXCOG00000009361	zfr	100	84.279	Xiphophorus_couchianus
ENSORLG00000017243	zfr	99	84.465	ENSXMAG00000013356	zfr	100	84.372	Xiphophorus_maculatus