EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000017281 (Gene tree)
Gene ID: 101172531
Gene Symbol: sharpin
Alias: -
Full Name: SHANK associated RH domain interactor
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 6090 bases
Position: chr17:26746906-26752995
Accession: 101172531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000021621	zf-RanBP	PF00641.18	2.7e-06	1	1
ENSORLP00000033749	zf-RanBP	PF00641.18	3.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000026829	-	1796	-	ENSORLP00000033749	476 (aa)	-	-
ENSORLT00000021622	-	1670	XM_023965329	ENSORLP00000021621	434 (aa)	XP_023821097	H2MS85

Gene Model

Click here to download ENSORLG00000017281's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04217	Necroptosis	KEGG
ola04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000017281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000017281	sharpin	95	55.682	ENSORLG00000007392	shrprbck1r	60	55.682

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000017281	sharpin	100	85.194	ENSAPOG00000023352	sharpin	100	85.194	Acanthochromis_polyacanthus
ENSORLG00000017281	sharpin	95	56.944	ENSAPOG00000022737	shrprbck1r	60	56.944	Acanthochromis_polyacanthus
ENSORLG00000017281	sharpin	95	57.009	ENSACIG00000002184	shrprbck1r	88	54.907	Amphilophus_citrinellus
ENSORLG00000017281	sharpin	100	85.649	ENSAOCG00000017464	sharpin	100	85.649	Amphiprion_ocellaris
ENSORLG00000017281	sharpin	95	56.561	ENSAOCG00000002890	shrprbck1r	60	56.561	Amphiprion_ocellaris
ENSORLG00000017281	sharpin	95	55.427	ENSAPEG00000023274	shrprbck1r	59	55.427	Amphiprion_percula
ENSORLG00000017281	sharpin	100	85.877	ENSAPEG00000004049	sharpin	100	85.877	Amphiprion_percula
ENSORLG00000017281	sharpin	96	85.000	ENSATEG00000007832	sharpin	88	85.000	Anabas_testudineus
ENSORLG00000017281	sharpin	95	55.556	ENSATEG00000014561	shrprbck1r	59	56.019	Anabas_testudineus
ENSORLG00000017281	sharpin	95	55.711	ENSACLG00000022609	shrprbck1r	60	56.177	Astatotilapia_calliptera
ENSORLG00000017281	sharpin	62	87.879	ENSACLG00000020160	-	86	87.879	Astatotilapia_calliptera
ENSORLG00000017281	sharpin	87	56.853	ENSAMXG00000006229	sharpin	97	55.838	Astyanax_mexicanus
ENSORLG00000017281	sharpin	95	57.556	ENSAMXG00000021016	shrprbck1r	66	57.111	Astyanax_mexicanus
ENSORLG00000017281	sharpin	95	50.935	ENSCSEG00000011306	shrprbck1r	59	52.103	Cynoglossus_semilaevis
ENSORLG00000017281	sharpin	100	76.888	ENSCVAG00000006586	sharpin	100	76.888	Cyprinodon_variegatus
ENSORLG00000017281	sharpin	95	54.206	ENSCVAG00000007250	shrprbck1r	60	54.206	Cyprinodon_variegatus
ENSORLG00000017281	sharpin	95	56.659	ENSDARG00000059871	shrprbck1r	90	57.931	Danio_rerio
ENSORLG00000017281	sharpin	91	53.528	ENSDARG00000076995	sharpin	98	53.528	Danio_rerio
ENSORLG00000017281	sharpin	95	60.570	ENSELUG00000016022	shrprbck1r	59	60.570	Esox_lucius
ENSORLG00000017281	sharpin	100	78.947	ENSFHEG00000013564	sharpin	99	78.947	Fundulus_heteroclitus
ENSORLG00000017281	sharpin	84	75.000	ENSGMOG00000010123	sharpin	94	75.000	Gadus_morhua
ENSORLG00000017281	sharpin	95	53.647	ENSGAFG00000009309	shrprbck1r	59	53.647	Gambusia_affinis
ENSORLG00000017281	sharpin	96	58.373	ENSGAFG00000021405	sharpin	97	60.969	Gambusia_affinis
ENSORLG00000017281	sharpin	95	56.177	ENSHBUG00000021933	shrprbck1r	60	56.177	Haplochromis_burtoni
ENSORLG00000017281	sharpin	95	70.702	ENSHCOG00000018847	sharpin	80	70.944	Hippocampus_comes
ENSORLG00000017281	sharpin	76	80.000	ENSIPUG00000011951	sharpin	98	80.000	Ictalurus_punctatus
ENSORLG00000017281	sharpin	88	55.949	ENSIPUG00000014247	shrprbck1r	60	53.917	Ictalurus_punctatus
ENSORLG00000017281	sharpin	96	77.986	ENSKMAG00000015204	sharpin	77	77.986	Kryptolebias_marmoratus
ENSORLG00000017281	sharpin	95	54.977	ENSKMAG00000015215	shrprbck1r	60	55.430	Kryptolebias_marmoratus
ENSORLG00000017281	sharpin	95	55.452	ENSLBEG00000016876	shrprbck1r	60	56.613	Labrus_bergylta
ENSORLG00000017281	sharpin	100	84.966	ENSLBEG00000016624	sharpin	99	84.966	Labrus_bergylta
ENSORLG00000017281	sharpin	86	47.236	ENSLACG00000010948	-	56	47.236	Latimeria_chalumnae
ENSORLG00000017281	sharpin	94	61.939	ENSLOCG00000008910	shrprbck1r	59	62.411	Lepisosteus_oculatus
ENSORLG00000017281	sharpin	95	54.567	ENSMAMG00000022930	shrprbck1r	60	54.695	Mastacembelus_armatus
ENSORLG00000017281	sharpin	82	96.552	ENSMAMG00000014645	sharpin	94	96.552	Mastacembelus_armatus
ENSORLG00000017281	sharpin	95	55.478	ENSMZEG00005021257	shrprbck1r	60	56.177	Maylandia_zebra
ENSORLG00000017281	sharpin	95	53.881	ENSMMOG00000003764	shrprbck1r	59	53.898	Mola_mola
ENSORLG00000017281	sharpin	76	84.444	ENSMMOG00000016788	sharpin	91	84.444	Mola_mola
ENSORLG00000017281	sharpin	82	96.552	ENSMALG00000020528	sharpin	95	96.552	Monopterus_albus
ENSORLG00000017281	sharpin	88	58.040	ENSMALG00000008861	shrprbck1r	55	58.040	Monopterus_albus
ENSORLG00000017281	sharpin	60	88.571	ENSNBRG00000012382	sharpin	94	88.571	Neolamprologus_brichardi
ENSORLG00000017281	sharpin	95	55.012	ENSNBRG00000002270	shrprbck1r	60	55.711	Neolamprologus_brichardi
ENSORLG00000017281	sharpin	89	74.010	ENSONIG00000009626	-	99	79.941	Oreochromis_niloticus
ENSORLG00000017281	sharpin	95	56.308	ENSONIG00000014401	shrprbck1r	60	57.009	Oreochromis_niloticus
ENSORLG00000017281	sharpin	100	98.848	ENSORLG00020000801	sharpin	100	98.848	Oryzias_latipes_hni
ENSORLG00000017281	sharpin	95	55.909	ENSORLG00020018619	shrprbck1r	60	55.909	Oryzias_latipes_hni
ENSORLG00000017281	sharpin	95	55.556	ENSORLG00015018865	shrprbck1r	59	55.556	Oryzias_latipes_hsok
ENSORLG00000017281	sharpin	100	99.078	ENSORLG00015009860	sharpin	100	99.078	Oryzias_latipes_hsok
ENSORLG00000017281	sharpin	77	91.429	ENSOMEG00000005729	sharpin	91	91.429	Oryzias_melastigma
ENSORLG00000017281	sharpin	95	55.809	ENSOMEG00000012749	shrprbck1r	60	55.809	Oryzias_melastigma
ENSORLG00000017281	sharpin	95	62.884	ENSPKIG00000006933	shrprbck1r	59	62.884	Paramormyrops_kingsleyae
ENSORLG00000017281	sharpin	95	60.520	ENSPKIG00000018308	-	88	60.757	Paramormyrops_kingsleyae
ENSORLG00000017281	sharpin	74	72.619	ENSPMGG00000019318	sharpin	94	88.667	Periophthalmus_magnuspinnatus
ENSORLG00000017281	sharpin	95	54.374	ENSPMGG00000013254	shrprbck1r	59	54.374	Periophthalmus_magnuspinnatus
ENSORLG00000017281	sharpin	95	53.953	ENSPFOG00000004214	shrprbck1r	89	53.953	Poecilia_formosa
ENSORLG00000017281	sharpin	100	78.261	ENSPFOG00000015253	sharpin	100	78.261	Poecilia_formosa
ENSORLG00000017281	sharpin	100	78.490	ENSPLAG00000000423	sharpin	100	78.490	Poecilia_latipinna
ENSORLG00000017281	sharpin	95	53.953	ENSPLAG00000020523	shrprbck1r	59	53.953	Poecilia_latipinna
ENSORLG00000017281	sharpin	96	54.545	ENSPMEG00000023030	sharpin	85	68.421	Poecilia_mexicana
ENSORLG00000017281	sharpin	95	54.907	ENSPMEG00000006877	shrprbck1r	59	54.907	Poecilia_mexicana
ENSORLG00000017281	sharpin	100	77.626	ENSPREG00000009702	sharpin	100	77.626	Poecilia_reticulata
ENSORLG00000017281	sharpin	95	52.558	ENSPREG00000014689	shrprbck1r	59	52.558	Poecilia_reticulata
ENSORLG00000017281	sharpin	95	55.478	ENSPNYG00000022601	shrprbck1r	60	56.177	Pundamilia_nyererei
ENSORLG00000017281	sharpin	95	58.277	ENSPNAG00000007847	shrprbck1r	60	58.465	Pygocentrus_nattereri
ENSORLG00000017281	sharpin	87	53.886	ENSPNAG00000002911	sharpin	99	52.850	Pygocentrus_nattereri
ENSORLG00000017281	sharpin	95	53.304	ENSSFOG00015004028	sharpin	93	58.696	Scleropages_formosus
ENSORLG00000017281	sharpin	95	56.193	ENSSMAG00000018085	shrprbck1r	60	57.110	Scophthalmus_maximus
ENSORLG00000017281	sharpin	95	55.581	ENSSDUG00000002959	shrprbck1r	59	56.720	Seriola_dumerili
ENSORLG00000017281	sharpin	95	62.319	ENSSDUG00000019039	sharpin	95	66.667	Seriola_dumerili
ENSORLG00000017281	sharpin	95	55.204	ENSSLDG00000009026	shrprbck1r	60	56.335	Seriola_lalandi_dorsalis
ENSORLG00000017281	sharpin	61	91.429	ENSSPAG00000021807	sharpin	92	91.892	Stegastes_partitus
ENSORLG00000017281	sharpin	95	56.027	ENSSPAG00000016097	shrprbck1r	61	56.027	Stegastes_partitus
ENSORLG00000017281	sharpin	95	68.116	ENSTRUG00000011046	sharpin	96	73.926	Takifugu_rubripes
ENSORLG00000017281	sharpin	95	52.887	ENSTRUG00000006949	shrprbck1r	58	53.580	Takifugu_rubripes
ENSORLG00000017281	sharpin	90	72.000	ENSTNIG00000008521	sharpin	98	78.313	Tetraodon_nigroviridis
ENSORLG00000017281	sharpin	79	80.952	ENSXCOG00000015019	sharpin	99	80.952	Xiphophorus_couchianus
ENSORLG00000017281	sharpin	95	51.651	ENSXCOG00000006701	shrprbck1r	58	51.651	Xiphophorus_couchianus
ENSORLG00000017281	sharpin	95	51.643	ENSXMAG00000018972	shrprbck1r	58	51.643	Xiphophorus_maculatus
ENSORLG00000017281	sharpin	100	77.854	ENSXMAG00000022076	sharpin	100	77.854	Xiphophorus_maculatus