EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000017328 (Gene tree)
Gene ID: 101159397
Gene Symbol: tfb1m
Alias: -
Full Name: transcription factor B1%2C mitochondrial
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 33286 bases
Position: chr22:16031764-16065049
Accession: 101159397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000021673	RrnaAD	PF00398.20	2.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000021674	-	1320	XM_004082631	ENSORLP00000021673	411 (aa)	XP_004082679	H2MSD5

Gene Model

Click here to download ENSORLG00000017328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000017328's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000017328	tfb1m	83	68.035	ENSG00000029639	TFB1M	99	68.035	Homo_sapiens
ENSORLG00000017328	tfb1m	83	82.698	ENSAPOG00000015493	tfb1m	96	82.698	Acanthochromis_polyacanthus
ENSORLG00000017328	tfb1m	83	66.082	ENSAMEG00000012761	TFB1M	98	66.082	Ailuropoda_melanoleuca
ENSORLG00000017328	tfb1m	82	83.776	ENSACIG00000014290	tfb1m	96	83.776	Amphilophus_citrinellus
ENSORLG00000017328	tfb1m	83	83.871	ENSAOCG00000004027	tfb1m	96	83.871	Amphiprion_ocellaris
ENSORLG00000017328	tfb1m	83	84.457	ENSAPEG00000020359	tfb1m	96	84.457	Amphiprion_percula
ENSORLG00000017328	tfb1m	82	83.776	ENSATEG00000006826	tfb1m	96	83.776	Anabas_testudineus
ENSORLG00000017328	tfb1m	80	70.606	ENSAPLG00000006328	TFB1M	95	70.606	Anas_platyrhynchos
ENSORLG00000017328	tfb1m	82	70.149	ENSACAG00000005244	TFB1M	97	70.149	Anolis_carolinensis
ENSORLG00000017328	tfb1m	80	70.213	ENSANAG00000021469	TFB1M	96	70.000	Aotus_nancymaae
ENSORLG00000017328	tfb1m	83	86.167	ENSACLG00000018734	tfb1m	96	86.167	Astatotilapia_calliptera
ENSORLG00000017328	tfb1m	80	80.606	ENSAMXG00000036128	tfb1m	90	80.606	Astyanax_mexicanus
ENSORLG00000017328	tfb1m	80	71.865	ENSBTAG00000031895	TFB1M	98	75.676	Bos_taurus
ENSORLG00000017328	tfb1m	78	44.136	WBGene00020189	tfbm-1	88	44.136	Caenorhabditis_elegans
ENSORLG00000017328	tfb1m	80	70.000	ENSCJAG00000012540	TFB1M	96	70.000	Callithrix_jacchus
ENSORLG00000017328	tfb1m	80	70.642	ENSCAFG00000000581	TFB1M	95	70.642	Canis_familiaris
ENSORLG00000017328	tfb1m	80	70.642	ENSCAFG00020015224	TFB1M	95	70.642	Canis_lupus_dingo
ENSORLG00000017328	tfb1m	80	71.560	ENSCHIG00000017013	TFB1M	98	71.560	Capra_hircus
ENSORLG00000017328	tfb1m	80	71.560	ENSTSYG00000012298	TFB1M	95	71.560	Carlito_syrichta
ENSORLG00000017328	tfb1m	57	50.638	ENSCAPG00000013843	TFB1M	78	50.638	Cavia_aperea
ENSORLG00000017328	tfb1m	80	68.788	ENSCPOG00000030422	TFB1M	95	68.788	Cavia_porcellus
ENSORLG00000017328	tfb1m	80	70.000	ENSCCAG00000015250	TFB1M	96	70.000	Cebus_capucinus
ENSORLG00000017328	tfb1m	81	48.640	ENSCATG00000009009	TFB1M	95	48.338	Cercocebus_atys
ENSORLG00000017328	tfb1m	80	69.394	ENSCLAG00000004500	TFB1M	96	69.394	Chinchilla_lanigera
ENSORLG00000017328	tfb1m	79	69.969	ENSCSAG00000013259	TFB1M	99	67.544	Chlorocebus_sabaeus
ENSORLG00000017328	tfb1m	80	69.817	ENSCHOG00000011245	TFB1M	95	69.817	Choloepus_hoffmanni
ENSORLG00000017328	tfb1m	79	73.765	ENSCPBG00000016320	TFB1M	95	73.765	Chrysemys_picta_bellii
ENSORLG00000017328	tfb1m	74	46.254	ENSCING00000003901	-	80	46.254	Ciona_intestinalis
ENSORLG00000017328	tfb1m	74	47.883	ENSCSAVG00000004721	-	80	47.883	Ciona_savignyi
ENSORLG00000017328	tfb1m	80	70.606	ENSCANG00000029768	TFB1M	98	70.606	Colobus_angolensis_palliatus
ENSORLG00000017328	tfb1m	80	68.788	ENSCGRG00001022866	Tfb1m	96	68.788	Cricetulus_griseus_chok1gshd
ENSORLG00000017328	tfb1m	77	69.524	ENSCGRG00000018084	Tfb1m	96	69.524	Cricetulus_griseus_crigri
ENSORLG00000017328	tfb1m	80	84.195	ENSCSEG00000000131	tfb1m	93	84.195	Cynoglossus_semilaevis
ENSORLG00000017328	tfb1m	83	83.578	ENSCVAG00000009201	tfb1m	97	83.578	Cyprinodon_variegatus
ENSORLG00000017328	tfb1m	80	75.684	ENSDARG00000040727	tfb1m	98	80.303	Danio_rerio
ENSORLG00000017328	tfb1m	83	68.786	ENSDNOG00000015984	-	95	68.786	Dasypus_novemcinctus
ENSORLG00000017328	tfb1m	69	62.057	ENSDNOG00000032672	-	98	62.057	Dasypus_novemcinctus
ENSORLG00000017328	tfb1m	79	70.245	ENSDORG00000012938	Tfb1m	95	70.245	Dipodomys_ordii
ENSORLG00000017328	tfb1m	77	48.438	FBgn0261381	mtTFB1	95	48.438	Drosophila_melanogaster
ENSORLG00000017328	tfb1m	80	49.695	ENSETEG00000005709	TFB1M	94	49.695	Echinops_telfairi
ENSORLG00000017328	tfb1m	78	55.486	ENSEBUG00000010530	tfb1m	92	55.452	Eptatretus_burgeri
ENSORLG00000017328	tfb1m	80	71.254	ENSEASG00005018887	TFB1M	94	71.254	Equus_asinus_asinus
ENSORLG00000017328	tfb1m	80	71.865	ENSECAG00000020997	TFB1M	94	71.865	Equus_caballus
ENSORLG00000017328	tfb1m	80	71.254	ENSEEUG00000014899	TFB1M	97	71.254	Erinaceus_europaeus
ENSORLG00000017328	tfb1m	85	77.650	ENSELUG00000002752	tfb1m	89	77.650	Esox_lucius
ENSORLG00000017328	tfb1m	80	70.031	ENSFCAG00000038785	TFB1M	95	70.031	Felis_catus
ENSORLG00000017328	tfb1m	81	68.882	ENSFALG00000012500	TFB1M	95	68.882	Ficedula_albicollis
ENSORLG00000017328	tfb1m	78	71.562	ENSFDAG00000016985	TFB1M	95	70.679	Fukomys_damarensis
ENSORLG00000017328	tfb1m	83	84.164	ENSFHEG00000008407	tfb1m	97	84.164	Fundulus_heteroclitus
ENSORLG00000017328	tfb1m	83	81.792	ENSGMOG00000018738	tfb1m	99	81.792	Gadus_morhua
ENSORLG00000017328	tfb1m	79	70.859	ENSGALG00000013647	TFB1M	93	70.859	Gallus_gallus
ENSORLG00000017328	tfb1m	83	83.284	ENSGAFG00000017997	tfb1m	97	83.284	Gambusia_affinis
ENSORLG00000017328	tfb1m	83	82.507	ENSGACG00000006884	tfb1m	97	82.507	Gasterosteus_aculeatus
ENSORLG00000017328	tfb1m	80	71.818	ENSGAGG00000025345	TFB1M	96	71.818	Gopherus_agassizii
ENSORLG00000017328	tfb1m	83	68.035	ENSGGOG00000012189	TFB1M	99	68.035	Gorilla_gorilla
ENSORLG00000017328	tfb1m	83	85.879	ENSHBUG00000019396	tfb1m	96	85.879	Haplochromis_burtoni
ENSORLG00000017328	tfb1m	80	71.212	ENSHGLG00000002028	TFB1M	95	71.212	Heterocephalus_glaber_female
ENSORLG00000017328	tfb1m	80	71.212	ENSHGLG00100001412	TFB1M	95	71.212	Heterocephalus_glaber_male
ENSORLG00000017328	tfb1m	81	82.779	ENSHCOG00000014135	tfb1m	95	82.779	Hippocampus_comes
ENSORLG00000017328	tfb1m	80	77.576	ENSIPUG00000010964	tfb1m	97	77.576	Ictalurus_punctatus
ENSORLG00000017328	tfb1m	80	70.606	ENSSTOG00000026264	TFB1M	96	70.606	Ictidomys_tridecemlineatus
ENSORLG00000017328	tfb1m	80	70.606	ENSJJAG00000022171	Tfb1m	93	70.606	Jaculus_jaculus
ENSORLG00000017328	tfb1m	83	82.111	ENSKMAG00000012667	tfb1m	98	82.111	Kryptolebias_marmoratus
ENSORLG00000017328	tfb1m	81	85.801	ENSLBEG00000011505	tfb1m	93	85.801	Labrus_bergylta
ENSORLG00000017328	tfb1m	80	74.848	ENSLACG00000012594	TFB1M	94	74.848	Latimeria_chalumnae
ENSORLG00000017328	tfb1m	80	71.557	ENSLOCG00000016850	tfb1m	95	71.557	Lepisosteus_oculatus
ENSORLG00000017328	tfb1m	79	71.166	ENSLAFG00000014035	-	95	70.948	Loxodonta_africana
ENSORLG00000017328	tfb1m	78	59.006	ENSLAFG00000032309	-	100	59.006	Loxodonta_africana
ENSORLG00000017328	tfb1m	81	70.393	ENSMFAG00000031968	TFB1M	96	70.393	Macaca_fascicularis
ENSORLG00000017328	tfb1m	81	70.091	ENSMMUG00000011171	TFB1M	96	70.091	Macaca_mulatta
ENSORLG00000017328	tfb1m	81	70.091	ENSMNEG00000042278	TFB1M	96	70.091	Macaca_nemestrina
ENSORLG00000017328	tfb1m	80	70.606	ENSMLEG00000000044	TFB1M	96	70.606	Mandrillus_leucophaeus
ENSORLG00000017328	tfb1m	81	84.290	ENSMAMG00000009423	tfb1m	94	84.290	Mastacembelus_armatus
ENSORLG00000017328	tfb1m	83	86.167	ENSMZEG00005005640	tfb1m	92	86.167	Maylandia_zebra
ENSORLG00000017328	tfb1m	64	77.652	ENSMGAG00000012779	TFB1M	100	77.358	Meleagris_gallopavo
ENSORLG00000017328	tfb1m	83	69.501	ENSMAUG00000006705	Tfb1m	99	69.501	Mesocricetus_auratus
ENSORLG00000017328	tfb1m	80	71.865	ENSMICG00000045849	TFB1M	95	71.865	Microcebus_murinus
ENSORLG00000017328	tfb1m	79	71.779	ENSMOCG00000013879	Tfb1m	98	70.326	Microtus_ochrogaster
ENSORLG00000017328	tfb1m	81	86.446	ENSMMOG00000002203	tfb1m	93	86.446	Mola_mola
ENSORLG00000017328	tfb1m	79	70.859	ENSMODG00000008169	TFB1M	96	70.000	Monodelphis_domestica
ENSORLG00000017328	tfb1m	82	83.136	ENSMALG00000011657	tfb1m	90	83.136	Monopterus_albus
ENSORLG00000017328	tfb1m	80	68.788	MGP_CAROLIEiJ_G0021018	Tfb1m	96	68.788	Mus_caroli
ENSORLG00000017328	tfb1m	80	68.788	ENSMUSG00000036983	Tfb1m	96	68.788	Mus_musculus
ENSORLG00000017328	tfb1m	79	70.552	MGP_PahariEiJ_G0023336	Tfb1m	96	69.697	Mus_pahari
ENSORLG00000017328	tfb1m	80	68.788	MGP_SPRETEiJ_G0021923	Tfb1m	96	68.788	Mus_spretus
ENSORLG00000017328	tfb1m	80	69.725	ENSMPUG00000002073	TFB1M	95	69.725	Mustela_putorius_furo
ENSORLG00000017328	tfb1m	80	70.948	ENSMLUG00000011329	TFB1M	95	70.948	Myotis_lucifugus
ENSORLG00000017328	tfb1m	80	69.091	ENSNGAG00000015154	Tfb1m	93	69.091	Nannospalax_galili
ENSORLG00000017328	tfb1m	83	85.879	ENSNBRG00000009004	tfb1m	97	85.879	Neolamprologus_brichardi
ENSORLG00000017328	tfb1m	83	68.035	ENSNLEG00000034352	TFB1M	99	68.035	Nomascus_leucogenys
ENSORLG00000017328	tfb1m	80	57.798	ENSMEUG00000001699	-	94	57.798	Notamacropus_eugenii
ENSORLG00000017328	tfb1m	80	53.211	ENSOPRG00000008921	TFB1M	96	53.211	Ochotona_princeps
ENSORLG00000017328	tfb1m	79	69.969	ENSODEG00000005915	TFB1M	94	69.969	Octodon_degus
ENSORLG00000017328	tfb1m	82	87.135	ENSONIG00000008109	tfb1m	99	87.135	Oreochromis_niloticus
ENSORLG00000017328	tfb1m	80	70.031	ENSOCUG00000012154	TFB1M	96	70.031	Oryctolagus_cuniculus
ENSORLG00000017328	tfb1m	83	98.542	ENSORLG00020002250	tfb1m	100	98.542	Oryzias_latipes_hni
ENSORLG00000017328	tfb1m	83	97.668	ENSORLG00015016067	tfb1m	100	97.668	Oryzias_latipes_hsok
ENSORLG00000017328	tfb1m	83	92.669	ENSOMEG00000015641	tfb1m	97	92.669	Oryzias_melastigma
ENSORLG00000017328	tfb1m	81	68.563	ENSOGAG00000011681	TFB1M	97	68.563	Otolemur_garnettii
ENSORLG00000017328	tfb1m	80	69.970	ENSOARG00000004216	TFB1M	98	69.970	Ovis_aries
ENSORLG00000017328	tfb1m	80	69.697	ENSPPAG00000030834	TFB1M	95	69.697	Pan_paniscus
ENSORLG00000017328	tfb1m	80	69.725	ENSPPRG00000013578	TFB1M	95	69.725	Panthera_pardus
ENSORLG00000017328	tfb1m	80	69.725	ENSPTIG00000003540	TFB1M	95	69.725	Panthera_tigris_altaica
ENSORLG00000017328	tfb1m	83	67.742	ENSPTRG00000018730	TFB1M	99	67.742	Pan_troglodytes
ENSORLG00000017328	tfb1m	81	70.393	ENSPANG00000007489	TFB1M	96	70.393	Papio_anubis
ENSORLG00000017328	tfb1m	80	78.287	ENSPKIG00000021117	tfb1m	93	78.287	Paramormyrops_kingsleyae
ENSORLG00000017328	tfb1m	80	71.818	ENSPSIG00000006643	TFB1M	96	71.818	Pelodiscus_sinensis
ENSORLG00000017328	tfb1m	83	81.034	ENSPMGG00000011289	tfb1m	100	81.034	Periophthalmus_magnuspinnatus
ENSORLG00000017328	tfb1m	80	69.697	ENSPEMG00000010410	Tfb1m	96	69.697	Peromyscus_maniculatus_bairdii
ENSORLG00000017328	tfb1m	81	69.486	ENSPCIG00000001010	TFB1M	92	69.486	Phascolarctos_cinereus
ENSORLG00000017328	tfb1m	83	82.216	ENSPFOG00000005139	tfb1m	97	82.216	Poecilia_formosa
ENSORLG00000017328	tfb1m	83	82.698	ENSPLAG00000021410	tfb1m	97	82.698	Poecilia_latipinna
ENSORLG00000017328	tfb1m	83	82.405	ENSPMEG00000020166	tfb1m	97	82.405	Poecilia_mexicana
ENSORLG00000017328	tfb1m	83	82.111	ENSPREG00000022392	tfb1m	97	82.111	Poecilia_reticulata
ENSORLG00000017328	tfb1m	83	66.082	ENSPPYG00000017123	TFB1M	99	66.082	Pongo_abelii
ENSORLG00000017328	tfb1m	72	56.610	ENSPCAG00000007078	TFB1M	98	56.610	Procavia_capensis
ENSORLG00000017328	tfb1m	80	71.560	ENSPCOG00000028453	TFB1M	95	71.560	Propithecus_coquereli
ENSORLG00000017328	tfb1m	80	72.171	ENSPVAG00000015818	TFB1M	95	72.171	Pteropus_vampyrus
ENSORLG00000017328	tfb1m	83	85.879	ENSPNYG00000007330	tfb1m	96	85.879	Pundamilia_nyererei
ENSORLG00000017328	tfb1m	80	79.817	ENSPNAG00000007507	tfb1m	93	79.817	Pygocentrus_nattereri
ENSORLG00000017328	tfb1m	80	69.697	ENSRNOG00000056223	Tfb1m	96	69.697	Rattus_norvegicus
ENSORLG00000017328	tfb1m	80	70.909	ENSRBIG00000039975	TFB1M	98	70.909	Rhinopithecus_bieti
ENSORLG00000017328	tfb1m	80	70.606	ENSRROG00000033802	TFB1M	98	70.606	Rhinopithecus_roxellana
ENSORLG00000017328	tfb1m	80	70.303	ENSSBOG00000008663	TFB1M	96	70.303	Saimiri_boliviensis_boliviensis
ENSORLG00000017328	tfb1m	77	63.208	ENSSHAG00000013259	TFB1M	92	63.208	Sarcophilus_harrisii
ENSORLG00000017328	tfb1m	82	76.488	ENSSFOG00015009739	tfb1m	96	76.488	Scleropages_formosus
ENSORLG00000017328	tfb1m	83	83.578	ENSSMAG00000008229	tfb1m	97	83.578	Scophthalmus_maximus
ENSORLG00000017328	tfb1m	81	85.498	ENSSDUG00000011871	tfb1m	93	85.498	Seriola_dumerili
ENSORLG00000017328	tfb1m	82	84.024	ENSSLDG00000023923	tfb1m	95	84.024	Seriola_lalandi_dorsalis
ENSORLG00000017328	tfb1m	54	73.874	ENSSARG00000003159	TFB1M	100	73.874	Sorex_araneus
ENSORLG00000017328	tfb1m	83	67.647	ENSSPUG00000015253	TFB1M	99	67.647	Sphenodon_punctatus
ENSORLG00000017328	tfb1m	81	88.253	ENSSPAG00000019515	tfb1m	93	88.253	Stegastes_partitus
ENSORLG00000017328	tfb1m	80	72.171	ENSSSCG00000024361	TFB1M	96	72.171	Sus_scrofa
ENSORLG00000017328	tfb1m	81	69.486	ENSTGUG00000011136	TFB1M	96	69.486	Taeniopygia_guttata
ENSORLG00000017328	tfb1m	82	85.000	ENSTRUG00000020334	tfb1m	96	85.000	Takifugu_rubripes
ENSORLG00000017328	tfb1m	53	86.301	ENSTNIG00000016882	tfb1m	97	86.301	Tetraodon_nigroviridis
ENSORLG00000017328	tfb1m	81	68.769	ENSTBEG00000008769	TFB1M	98	67.647	Tupaia_belangeri
ENSORLG00000017328	tfb1m	80	71.560	ENSTTRG00000006327	TFB1M	97	71.560	Tursiops_truncatus
ENSORLG00000017328	tfb1m	79	68.405	ENSUAMG00000017802	TFB1M	97	66.082	Ursus_americanus
ENSORLG00000017328	tfb1m	83	66.667	ENSUMAG00000013377	TFB1M	89	66.667	Ursus_maritimus
ENSORLG00000017328	tfb1m	81	69.880	ENSVPAG00000010148	TFB1M	98	69.880	Vicugna_pacos
ENSORLG00000017328	tfb1m	80	70.031	ENSVVUG00000007643	TFB1M	96	70.031	Vulpes_vulpes
ENSORLG00000017328	tfb1m	81	73.716	ENSXETG00000007852	tfb1m	96	73.716	Xenopus_tropicalis
ENSORLG00000017328	tfb1m	83	83.578	ENSXCOG00000013230	tfb1m	97	83.578	Xiphophorus_couchianus
ENSORLG00000017328	tfb1m	83	83.578	ENSXMAG00000019222	tfb1m	97	83.578	Xiphophorus_maculatus