EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000017358 (Gene tree)
Gene ID: 101159873
Gene Symbol: SCAF8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 79873 bases
Position: chr22:16111227-16191099
Accession: 101159873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000021709	RRM_1	PF00076.22	4.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000021710	SCAF8-201	6450	XM_011490509	ENSORLP00000021709	1384 (aa)	XP_011488811	H2MSH1

Gene Model

Click here to download ENSORLG00000017358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000017358's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000017358	SCAF8	78	68.927	ENSG00000213079	SCAF8	86	68.927	Homo_sapiens
ENSORLG00000017358	SCAF8	100	81.510	ENSAPOG00000015527	SCAF8	100	81.299	Acanthochromis_polyacanthus
ENSORLG00000017358	SCAF8	78	66.120	ENSAMEG00000007583	SCAF8	83	67.428	Ailuropoda_melanoleuca
ENSORLG00000017358	SCAF8	100	81.197	ENSAOCG00000002421	SCAF8	100	80.986	Amphiprion_ocellaris
ENSORLG00000017358	SCAF8	98	71.491	ENSAPEG00000020115	SCAF8	68	65.139	Amphiprion_percula
ENSORLG00000017358	SCAF8	78	82.196	ENSATEG00000006959	SCAF8	95	82.163	Anabas_testudineus
ENSORLG00000017358	SCAF8	75	71.204	ENSAPLG00000005765	SCAF8	92	67.774	Anas_platyrhynchos
ENSORLG00000017358	SCAF8	75	71.963	ENSACAG00000005282	SCAF8	81	71.429	Anolis_carolinensis
ENSORLG00000017358	SCAF8	78	68.927	ENSANAG00000036184	SCAF8	86	68.927	Aotus_nancymaae
ENSORLG00000017358	SCAF8	100	78.951	ENSACLG00000018828	SCAF8	100	78.520	Astatotilapia_calliptera
ENSORLG00000017358	SCAF8	78	68.796	ENSBTAG00000031917	SCAF8	86	68.919	Bos_taurus
ENSORLG00000017358	SCAF8	78	69.174	ENSCJAG00000012631	SCAF8	83	67.428	Callithrix_jacchus
ENSORLG00000017358	SCAF8	77	69.039	ENSCAFG00000000570	SCAF8	85	69.164	Canis_familiaris
ENSORLG00000017358	SCAF8	77	69.039	ENSCAFG00020015048	SCAF8	84	69.164	Canis_lupus_dingo
ENSORLG00000017358	SCAF8	78	68.796	ENSCHIG00000025041	SCAF8	86	68.919	Capra_hircus
ENSORLG00000017358	SCAF8	78	66.827	ENSTSYG00000010991	SCAF8	85	66.827	Carlito_syrichta
ENSORLG00000017358	SCAF8	57	58.561	ENSCPOG00000022216	-	62	57.692	Cavia_porcellus
ENSORLG00000017358	SCAF8	78	60.099	ENSCPOG00000030311	-	54	54.674	Cavia_porcellus
ENSORLG00000017358	SCAF8	78	68.927	ENSCCAG00000024952	SCAF8	86	69.051	Cebus_capucinus
ENSORLG00000017358	SCAF8	78	68.927	ENSCATG00000035361	SCAF8	86	68.927	Cercocebus_atys
ENSORLG00000017358	SCAF8	78	67.730	ENSCLAG00000004910	SCAF8	86	68.199	Chinchilla_lanigera
ENSORLG00000017358	SCAF8	78	66.002	ENSCSAG00000013430	SCAF8	86	67.188	Chlorocebus_sabaeus
ENSORLG00000017358	SCAF8	78	70.087	ENSCPBG00000016330	SCAF8	81	69.278	Chrysemys_picta_bellii
ENSORLG00000017358	SCAF8	78	68.804	ENSCANG00000039499	SCAF8	85	68.664	Colobus_angolensis_palliatus
ENSORLG00000017358	SCAF8	54	72.251	ENSCGRG00001020167	Scaf8	93	56.872	Cricetulus_griseus_chok1gshd
ENSORLG00000017358	SCAF8	54	71.805	ENSCGRG00000004120	Scaf8	92	56.633	Cricetulus_griseus_crigri
ENSORLG00000017358	SCAF8	100	75.639	ENSCSEG00000000043	-	100	76.207	Cynoglossus_semilaevis
ENSORLG00000017358	SCAF8	96	74.870	ENSCVAG00000000925	SCAF8	99	74.870	Cyprinodon_variegatus
ENSORLG00000017358	SCAF8	74	65.641	ENSDNOG00000025271	SCAF8	87	65.128	Dasypus_novemcinctus
ENSORLG00000017358	SCAF8	77	67.273	ENSDORG00000006391	Scaf8	92	55.326	Dipodomys_ordii
ENSORLG00000017358	SCAF8	78	66.627	ENSEASG00005018879	SCAF8	88	67.217	Equus_asinus_asinus
ENSORLG00000017358	SCAF8	78	69.004	ENSECAG00000005540	SCAF8	86	69.127	Equus_caballus
ENSORLG00000017358	SCAF8	76	70.117	ENSELUG00000002779	SCAF8	100	60.091	Esox_lucius
ENSORLG00000017358	SCAF8	78	68.537	ENSFCAG00000023424	SCAF8	87	68.575	Felis_catus
ENSORLG00000017358	SCAF8	75	70.182	ENSFALG00000012433	SCAF8	93	68.148	Ficedula_albicollis
ENSORLG00000017358	SCAF8	78	68.148	ENSFDAG00000010335	SCAF8	85	68.148	Fukomys_damarensis
ENSORLG00000017358	SCAF8	100	76.425	ENSFHEG00000008284	SCAF8	100	76.683	Fundulus_heteroclitus
ENSORLG00000017358	SCAF8	65	77.326	ENSGMOG00000018812	SCAF8	83	77.326	Gadus_morhua
ENSORLG00000017358	SCAF8	77	67.251	ENSGALG00000013635	SCAF8	91	66.901	Gallus_gallus
ENSORLG00000017358	SCAF8	100	75.282	ENSGAFG00000018033	SCAF8	100	76.062	Gambusia_affinis
ENSORLG00000017358	SCAF8	78	78.222	ENSGACG00000006909	SCAF8	99	78.354	Gasterosteus_aculeatus
ENSORLG00000017358	SCAF8	78	68.927	ENSGGOG00000008645	SCAF8	86	68.927	Gorilla_gorilla
ENSORLG00000017358	SCAF8	100	78.807	ENSHBUG00000019537	SCAF8	100	78.376	Haplochromis_burtoni
ENSORLG00000017358	SCAF8	77	68.375	ENSHGLG00000003619	SCAF8	86	68.519	Heterocephalus_glaber_female
ENSORLG00000017358	SCAF8	77	68.375	ENSHGLG00100004708	SCAF8	86	68.375	Heterocephalus_glaber_male
ENSORLG00000017358	SCAF8	77	68.875	ENSSTOG00000026043	SCAF8	85	68.875	Ictidomys_tridecemlineatus
ENSORLG00000017358	SCAF8	77	68.193	ENSJJAG00000020480	Scaf8	92	55.760	Jaculus_jaculus
ENSORLG00000017358	SCAF8	100	80.444	ENSKMAG00000012767	SCAF8	100	80.444	Kryptolebias_marmoratus
ENSORLG00000017358	SCAF8	84	95.522	ENSLBEG00000012484	-	92	92.617	Labrus_bergylta
ENSORLG00000017358	SCAF8	78	64.223	ENSLOCG00000016856	SCAF8	93	64.292	Lepisosteus_oculatus
ENSORLG00000017358	SCAF8	75	71.838	ENSLAFG00000000022	SCAF8	93	56.245	Loxodonta_africana
ENSORLG00000017358	SCAF8	78	68.927	ENSMFAG00000032738	SCAF8	86	68.927	Macaca_fascicularis
ENSORLG00000017358	SCAF8	78	68.927	ENSMMUG00000015163	SCAF8	86	68.927	Macaca_mulatta
ENSORLG00000017358	SCAF8	78	68.927	ENSMNEG00000043466	SCAF8	86	68.927	Macaca_nemestrina
ENSORLG00000017358	SCAF8	77	68.914	ENSMLEG00000034845	SCAF8	85	68.914	Mandrillus_leucophaeus
ENSORLG00000017358	SCAF8	97	76.681	ENSMAMG00000009457	SCAF8	100	76.754	Mastacembelus_armatus
ENSORLG00000017358	SCAF8	100	78.879	ENSMZEG00005005698	SCAF8	100	78.448	Maylandia_zebra
ENSORLG00000017358	SCAF8	77	69.012	ENSMGAG00000012762	SCAF8	92	68.642	Meleagris_gallopavo
ENSORLG00000017358	SCAF8	74	72.281	ENSMAUG00000009513	Scaf8	93	56.929	Mesocricetus_auratus
ENSORLG00000017358	SCAF8	78	66.588	ENSMICG00000028965	SCAF8	93	55.793	Microcebus_murinus
ENSORLG00000017358	SCAF8	75	71.859	ENSMOCG00000014950	Scaf8	82	71.597	Microtus_ochrogaster
ENSORLG00000017358	SCAF8	98	73.300	ENSMMOG00000002216	SCAF8	99	73.850	Mola_mola
ENSORLG00000017358	SCAF8	77	69.500	ENSMODG00000008301	SCAF8	85	69.875	Monodelphis_domestica
ENSORLG00000017358	SCAF8	100	78.092	ENSMALG00000011584	SCAF8	100	78.163	Monopterus_albus
ENSORLG00000017358	SCAF8	75	71.597	MGP_CAROLIEiJ_G0021016	Scaf8	93	56.543	Mus_caroli
ENSORLG00000017358	SCAF8	75	71.466	ENSMUSG00000046201	Scaf8	93	56.379	Mus_musculus
ENSORLG00000017358	SCAF8	75	71.990	MGP_PahariEiJ_G0023334	Scaf8	93	56.440	Mus_pahari
ENSORLG00000017358	SCAF8	75	69.682	ENSMPUG00000001974	SCAF8	83	69.809	Mustela_putorius_furo
ENSORLG00000017358	SCAF8	78	68.473	ENSMLUG00000029190	SCAF8	86	68.596	Myotis_lucifugus
ENSORLG00000017358	SCAF8	78	68.010	ENSNGAG00000012332	Scaf8	93	56.353	Nannospalax_galili
ENSORLG00000017358	SCAF8	80	77.460	ENSNBRG00000009067	SCAF8	93	79.006	Neolamprologus_brichardi
ENSORLG00000017358	SCAF8	78	67.322	ENSNLEG00000015509	SCAF8	85	66.915	Nomascus_leucogenys
ENSORLG00000017358	SCAF8	54	75.258	ENSOPRG00000018413	-	69	75.258	Ochotona_princeps
ENSORLG00000017358	SCAF8	78	68.681	ENSODEG00000007296	SCAF8	86	68.681	Octodon_degus
ENSORLG00000017358	SCAF8	77	83.015	ENSONIG00000008119	SCAF8	92	82.790	Oreochromis_niloticus
ENSORLG00000017358	SCAF8	77	68.875	ENSOCUG00000026063	SCAF8	85	68.875	Oryctolagus_cuniculus
ENSORLG00000017358	SCAF8	100	98.121	ENSORLG00020002214	SCAF8	100	98.121	Oryzias_latipes_hni
ENSORLG00000017358	SCAF8	100	98.699	ENSORLG00015015779	SCAF8	100	98.699	Oryzias_latipes_hsok
ENSORLG00000017358	SCAF8	100	93.165	ENSOMEG00000015471	SCAF8	100	93.094	Oryzias_melastigma
ENSORLG00000017358	SCAF8	78	64.943	ENSOGAG00000034223	SCAF8	90	54.487	Otolemur_garnettii
ENSORLG00000017358	SCAF8	77	68.571	ENSOARG00000004159	SCAF8	86	68.696	Ovis_aries
ENSORLG00000017358	SCAF8	78	68.927	ENSPPAG00000039826	SCAF8	86	68.927	Pan_paniscus
ENSORLG00000017358	SCAF8	78	69.250	ENSPPRG00000023175	SCAF8	86	69.373	Panthera_pardus
ENSORLG00000017358	SCAF8	77	69.116	ENSPTIG00000014836	SCAF8	85	69.240	Panthera_tigris_altaica
ENSORLG00000017358	SCAF8	78	68.927	ENSPTRG00000018727	SCAF8	86	68.927	Pan_troglodytes
ENSORLG00000017358	SCAF8	78	68.927	ENSPANG00000017489	SCAF8	85	66.215	Papio_anubis
ENSORLG00000017358	SCAF8	78	69.901	ENSPKIG00000021212	SCAF8	89	71.545	Paramormyrops_kingsleyae
ENSORLG00000017358	SCAF8	67	65.714	ENSPSIG00000008614	SCAF8	70	65.263	Pelodiscus_sinensis
ENSORLG00000017358	SCAF8	74	71.618	ENSPEMG00000010531	Scaf8	93	55.795	Peromyscus_maniculatus_bairdii
ENSORLG00000017358	SCAF8	78	69.877	ENSPCIG00000001141	SCAF8	86	70.123	Phascolarctos_cinereus
ENSORLG00000017358	SCAF8	100	75.691	ENSPFOG00000004176	SCAF8	89	88.531	Poecilia_formosa
ENSORLG00000017358	SCAF8	60	37.188	ENSPFOG00000003261	scaf4b	76	56.316	Poecilia_formosa
ENSORLG00000017358	SCAF8	100	75.904	ENSPLAG00000021432	SCAF8	100	76.754	Poecilia_latipinna
ENSORLG00000017358	SCAF8	100	75.620	ENSPMEG00000007591	SCAF8	100	76.400	Poecilia_mexicana
ENSORLG00000017358	SCAF8	100	76.045	ENSPREG00000000652	SCAF8	100	76.541	Poecilia_reticulata
ENSORLG00000017358	SCAF8	78	67.528	ENSPPYG00000017121	SCAF8	86	67.528	Pongo_abelii
ENSORLG00000017358	SCAF8	64	79.599	ENSPCAG00000013044	SCAF8	74	79.766	Procavia_capensis
ENSORLG00000017358	SCAF8	78	66.824	ENSPCOG00000002067	SCAF8	87	66.667	Propithecus_coquereli
ENSORLG00000017358	SCAF8	78	68.480	ENSPVAG00000005582	SCAF8	87	68.603	Pteropus_vampyrus
ENSORLG00000017358	SCAF8	100	78.951	ENSPNYG00000007277	SCAF8	100	78.520	Pundamilia_nyererei
ENSORLG00000017358	SCAF8	81	70.162	ENSPNAG00000024740	SCAF8	81	72.288	Pygocentrus_nattereri
ENSORLG00000017358	SCAF8	75	71.728	ENSRNOG00000016919	Scaf8	93	56.379	Rattus_norvegicus
ENSORLG00000017358	SCAF8	78	68.804	ENSRBIG00000035769	SCAF8	86	68.804	Rhinopithecus_bieti
ENSORLG00000017358	SCAF8	78	68.804	ENSRROG00000013580	SCAF8	86	68.804	Rhinopithecus_roxellana
ENSORLG00000017358	SCAF8	78	68.927	ENSSBOG00000027023	SCAF8	86	68.927	Saimiri_boliviensis_boliviensis
ENSORLG00000017358	SCAF8	78	69.012	ENSSHAG00000009915	SCAF8	86	69.914	Sarcophilus_harrisii
ENSORLG00000017358	SCAF8	77	63.542	ENSSFOG00015009481	SCAF8	86	78.667	Scleropages_formosus
ENSORLG00000017358	SCAF8	77	83.806	ENSSMAG00000008275	SCAF8	100	76.560	Scophthalmus_maximus
ENSORLG00000017358	SCAF8	75	72.382	ENSSPUG00000015219	SCAF8	79	71.990	Sphenodon_punctatus
ENSORLG00000017358	SCAF8	78	66.861	ENSSSCG00000004070	SCAF8	88	67.175	Sus_scrofa
ENSORLG00000017358	SCAF8	75	71.656	ENSTGUG00000011151	SCAF8	89	66.429	Taeniopygia_guttata
ENSORLG00000017358	SCAF8	100	73.777	ENSTRUG00000009243	SCAF8	100	72.818	Takifugu_rubripes
ENSORLG00000017358	SCAF8	78	78.506	ENSTNIG00000016885	SCAF8	99	78.317	Tetraodon_nigroviridis
ENSORLG00000017358	SCAF8	77	66.141	ENSTTRG00000014538	SCAF8	88	66.748	Tursiops_truncatus
ENSORLG00000017358	SCAF8	78	69.212	ENSUAMG00000024736	SCAF8	85	69.202	Ursus_americanus
ENSORLG00000017358	SCAF8	76	68.742	ENSUMAG00000013404	SCAF8	85	68.869	Ursus_maritimus
ENSORLG00000017358	SCAF8	59	58.583	ENSVPAG00000012465	SCAF8	96	60.796	Vicugna_pacos
ENSORLG00000017358	SCAF8	78	68.642	ENSVVUG00000007532	SCAF8	86	68.830	Vulpes_vulpes
ENSORLG00000017358	SCAF8	71	70.231	ENSXETG00000013132	scaf8	77	70.243	Xenopus_tropicalis
ENSORLG00000017358	SCAF8	100	76.170	ENSXMAG00000019192	SCAF8	100	76.437	Xiphophorus_maculatus