EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000017386 (Gene tree)
Gene ID: 101170439
Gene Symbol: -
Alias: -
Full Name: poly
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 39145 bases
Position: chr9:30903835-30942979
Accession: 101170439
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000045703	PARP	PF00644.20	5.5e-26	1	1
ENSORLP00000038739	PARP	PF00644.20	5.6e-26	1	1
ENSORLP00000045450	PARP	PF00644.20	5.8e-26	1	1
ENSORLP00000021744	PARP	PF00644.20	4.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000028481	-	6475	XM_023958843	ENSORLP00000045450	1853 (aa)	XP_023814611	UPI000CE281B6
ENSORLT00000021745	-	5106	-	ENSORLP00000021744	1701 (aa)	-	H2MSK5
ENSORLT00000037622	-	6840	-	ENSORLP00000038739	1778 (aa)	-	-
ENSORLT00000037753	-	6765	-	ENSORLP00000045703	1753 (aa)	-	-

Gene Model

Click here to download ENSORLG00000017386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000017386's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000017386	-	100	89.869	ENSORLG00000017404	-	97	89.869
ENSORLG00000017386	-	52	33.775	ENSORLG00000007845	-	89	33.775

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000017386	-	95	57.336	ENSAPOG00000002274	-	99	57.619	Acanthochromis_polyacanthus
ENSORLG00000017386	-	93	54.191	ENSAOCG00000020608	-	100	58.444	Amphiprion_ocellaris
ENSORLG00000017386	-	61	52.883	ENSAMXG00000010091	-	99	52.542	Astyanax_mexicanus
ENSORLG00000017386	-	85	32.692	ENSAMXG00000010209	-	99	31.967	Astyanax_mexicanus
ENSORLG00000017386	-	99	54.974	ENSCVAG00000009352	-	99	59.593	Cyprinodon_variegatus
ENSORLG00000017386	-	98	46.357	ENSDARG00000112454	FO744833.2	99	45.541	Danio_rerio
ENSORLG00000017386	-	96	54.248	ENSELUG00000013643	-	99	55.325	Esox_lucius
ENSORLG00000017386	-	98	47.284	ENSIPUG00000019562	-	89	56.633	Ictalurus_punctatus
ENSORLG00000017386	-	80	49.045	ENSIPUG00000019762	-	87	49.045	Ictalurus_punctatus
ENSORLG00000017386	-	98	64.207	ENSKMAG00000010882	-	99	67.005	Kryptolebias_marmoratus
ENSORLG00000017386	-	99	60.921	ENSLBEG00000026419	-	99	56.582	Labrus_bergylta
ENSORLG00000017386	-	95	59.375	ENSMZEG00005002061	-	99	59.375	Maylandia_zebra
ENSORLG00000017386	-	85	70.408	ENSMZEG00005027856	-	98	70.408	Maylandia_zebra
ENSORLG00000017386	-	87	74.510	ENSMMOG00000010419	-	95	74.510	Mola_mola
ENSORLG00000017386	-	99	58.759	ENSONIG00000000234	-	99	57.614	Oreochromis_niloticus
ENSORLG00000017386	-	95	90.326	ENSORLG00015004253	-	94	95.580	Oryzias_latipes_hsok
ENSORLG00000017386	-	96	97.674	ENSORLG00015004157	-	100	97.721	Oryzias_latipes_hsok
ENSORLG00000017386	-	94	83.432	ENSOMEG00000009483	-	98	83.432	Oryzias_melastigma
ENSORLG00000017386	-	99	59.762	ENSPFOG00000015738	-	99	59.595	Poecilia_formosa
ENSORLG00000017386	-	93	76.159	ENSPREG00000017145	-	99	76.159	Poecilia_reticulata
ENSORLG00000017386	-	86	58.704	ENSPNYG00000006865	-	99	53.691	Pundamilia_nyererei
ENSORLG00000017386	-	100	45.146	ENSSFOG00015006999	-	98	45.146	Scleropages_formosus
ENSORLG00000017386	-	74	32.026	ENSSFOG00015019732	-	91	35.533	Scleropages_formosus
ENSORLG00000017386	-	94	60.665	ENSSMAG00000016922	-	100	67.172	Scophthalmus_maximus
ENSORLG00000017386	-	56	61.610	ENSSDUG00000013560	-	98	61.610	Seriola_dumerili
ENSORLG00000017386	-	100	54.466	ENSSPAG00000014708	-	91	67.000	Stegastes_partitus
ENSORLG00000017386	-	99	48.018	ENSTRUG00000003423	-	98	47.908	Takifugu_rubripes
ENSORLG00000017386	-	93	77.483	ENSXCOG00000012535	-	99	77.483	Xiphophorus_couchianus
ENSORLG00000017386	-	52	64.418	ENSXMAG00000015158	-	99	70.051	Xiphophorus_maculatus