EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000017404 (Gene tree)
Gene ID
101170686
Gene Symbol
-
Alias
-
Full Name
poly
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Minus strand
Length
33240 bases
Position
chr9:30856880-30890119
Accession
101170686
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000045676PARPPF00644.201.1e-2811
ENSORLP00000021766PARPPF00644.203.2e-2811
ENSORLP00000045235PARPPF00644.203.2e-2811
ENSORLP00000021764PARPPF00644.203.6e-2811
ENSORLP00000031982PARPPF00644.201.2e-2611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000021767-6506XM_023958841ENSORLP000000217661904 (aa)XP_023814609H2MSM6
ENSORLT00000033683-1041-ENSORLP00000045676346 (aa)--
ENSORLT00000021765-6791XM_023958839ENSORLP000000217641999 (aa)XP_023814607H2MSM4
ENSORLT00000029481-6539-ENSORLP000000452351915 (aa)--
ENSORLT00000032532-5112-ENSORLP000000319821703 (aa)--
Gene Model
Click here to download ENSORLG00000017404's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000017404's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000017404-9789.869ENSORLG00000017386-10089.869
ENSORLG00000017404-8258.170ENSORLG00000008781-9938.039
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000017404-9556.442ENSAPOG00000002274-9561.404Acanthochromis_polyacanthus
ENSORLG00000017404-7244.400ENSACIG00000005931-7072.826Amphilophus_citrinellus
ENSORLG00000017404-9658.997ENSACIG00000014929-8171.711Amphilophus_citrinellus
ENSORLG00000017404-8372.368ENSAOCG00000020608-10057.656Amphiprion_ocellaris
ENSORLG00000017404-8263.158ENSAMXG00000010091-9948.645Astyanax_mexicanus
ENSORLG00000017404-7948.598ENSAMXG00000010209-9238.125Astyanax_mexicanus
ENSORLG00000017404-9663.964ENSCVAG00000009352-9968.627Cyprinodon_variegatus
ENSORLG00000017404-8169.737ENSDARG00000112454FO744833.29852.326Danio_rerio
ENSORLG00000017404-8467.320ENSELUG00000013643-9952.730Esox_lucius
ENSORLG00000017404-8750.000ENSELUG00000004826-9636.508Esox_lucius
ENSORLG00000017404-9561.377ENSHBUG00000013327-8765.979Haplochromis_burtoni
ENSORLG00000017404-9263.816ENSIPUG00000019562-8864.844Ictalurus_punctatus
ENSORLG00000017404-8146.176ENSIPUG00000019762-9941.994Ictalurus_punctatus
ENSORLG00000017404-8875.817ENSKMAG00000010882-9268.912Kryptolebias_marmoratus
ENSORLG00000017404-9862.970ENSLBEG00000026419-9968.000Labrus_bergylta
ENSORLG00000017404-8471.242ENSMZEG00005002061-9959.326Maylandia_zebra
ENSORLG00000017404-5180.000ENSMZEG00005027852-10063.745Maylandia_zebra
ENSORLG00000017404-8877.551ENSMZEG00005027856-9977.551Maylandia_zebra
ENSORLG00000017404-8770.395ENSMMOG00000010419-9570.395Mola_mola
ENSORLG00000017404-9559.091ENSNBRG00000002998-10062.500Neolamprologus_brichardi
ENSORLG00000017404-8772.549ENSONIG00000000234-9957.069Oreochromis_niloticus
ENSORLG00000017404-5375.862ENSONIG00000000241-10063.762Oreochromis_niloticus
ENSORLG00000017404-9363.095ENSORLG00020014046-10069.141Oryzias_latipes_hni
ENSORLG00000017404-9791.949ENSORLG00015004253-10094.964Oryzias_latipes_hsok
ENSORLG00000017404-95100.000ENSORLG00015004157-99100.000Oryzias_latipes_hsok
ENSORLG00000017404-9475.796ENSOMEG00000009483-9875.796Oryzias_melastigma
ENSORLG00000017404-9348.305ENSPKIG00000004064-9046.667Paramormyrops_kingsleyae
ENSORLG00000017404-8276.821ENSPFOG00000015738-9958.768Poecilia_formosa
ENSORLG00000017404-9662.722ENSPLAG00000022742-8871.212Poecilia_latipinna
ENSORLG00000017404-9374.834ENSPREG00000017145-9974.834Poecilia_reticulata
ENSORLG00000017404-7970.807ENSPNYG00000006865-9464.615Pundamilia_nyererei
ENSORLG00000017404-7644.643ENSPNAG00000005968-8937.056Pygocentrus_nattereri
ENSORLG00000017404-6150.233ENSPNAG00000004111-9255.311Pygocentrus_nattereri
ENSORLG00000017404-8365.789ENSPNAG00000026750-9558.209Pygocentrus_nattereri
ENSORLG00000017404-8948.718ENSSFOG00015019732-8142.012Scleropages_formosus
ENSORLG00000017404-9359.690ENSSFOG00015006999-9647.872Scleropages_formosus
ENSORLG00000017404-9959.700ENSSMAG00000016922-10063.861Scophthalmus_maximus
ENSORLG00000017404-8371.429ENSSDUG00000013560-9563.621Seriola_dumerili
ENSORLG00000017404-7149.438ENSSLDG00000011620-9261.255Seriola_lalandi_dorsalis
ENSORLG00000017404-9559.159ENSSPAG00000014708-9958.025Stegastes_partitus
ENSORLG00000017404-8565.359ENSTRUG00000003423-9848.229Takifugu_rubripes
ENSORLG00000017404-9376.821ENSXCOG00000012535-9976.821Xiphophorus_couchianus
ENSORLG00000017404-9563.205ENSXMAG00000015158-10065.430Xiphophorus_maculatus

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