EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000017691 (Gene tree)
Gene ID: 101168413
Gene Symbol: si:dkeyp-33b5.4
Alias: -
Full Name: KIAA0391 ortholog
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 12425 bases
Position: chr22:19813582-19826006
Accession: 101168413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000022139	PPR	PF01535.20	4e-06	1	1
ENSORLP00000022140	PPR	PF01535.20	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000022140	-	1434	-	ENSORLP00000022139	477 (aa)	-	H2MTN3
ENSORLT00000022141	-	1806	XM_004082662	ENSORLP00000022140	601 (aa)	XP_004082710	H2MTN4

Gene Model

Click here to download ENSORLG00000017691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000017691's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000017691	si:dkeyp-33b5.4	96	72.301	ENSAPOG00000008975	si:dkeyp-33b5.4	99	65.934	Acanthochromis_polyacanthus
ENSORLG00000017691	si:dkeyp-33b5.4	96	75.000	ENSAOCG00000018169	si:dkeyp-33b5.4	99	67.846	Amphiprion_ocellaris
ENSORLG00000017691	si:dkeyp-33b5.4	97	72.234	ENSAPEG00000001983	si:dkeyp-33b5.4	93	71.154	Amphiprion_percula
ENSORLG00000017691	si:dkeyp-33b5.4	96	51.586	ENSCPBG00000026198	-	84	50.784	Chrysemys_picta_bellii
ENSORLG00000017691	si:dkeyp-33b5.4	95	58.635	ENSDARG00000075057	si:dkeyp-33b5.4	88	57.364	Danio_rerio
ENSORLG00000017691	si:dkeyp-33b5.4	95	43.488	ENSEBUG00000012825	si:dkeyp-33b5.4	90	39.595	Eptatretus_burgeri
ENSORLG00000017691	si:dkeyp-33b5.4	96	46.122	ENSFALG00000006013	-	80	47.046	Ficedula_albicollis
ENSORLG00000017691	si:dkeyp-33b5.4	96	46.122	ENSGALG00000034264	-	85	45.049	Gallus_gallus
ENSORLG00000017691	si:dkeyp-33b5.4	100	97.181	ENSORLG00015012848	si:dkeyp-33b5.4	100	97.181	Oryzias_latipes_hsok
ENSORLG00000017691	si:dkeyp-33b5.4	98	48.148	ENSOGAG00000024550	-	92	44.948	Otolemur_garnettii
ENSORLG00000017691	si:dkeyp-33b5.4	86	70.139	ENSPMGG00000008712	si:dkeyp-33b5.4	92	71.824	Periophthalmus_magnuspinnatus
ENSORLG00000017691	si:dkeyp-33b5.4	96	61.354	ENSPNAG00000017004	si:dkeyp-33b5.4	89	58.960	Pygocentrus_nattereri
ENSORLG00000017691	si:dkeyp-33b5.4	96	68.958	ENSSPAG00000000893	si:dkeyp-33b5.4	96	64.060	Stegastes_partitus
ENSORLG00000017691	si:dkeyp-33b5.4	96	44.632	ENSTGUG00000011968	-	99	45.781	Taeniopygia_guttata