EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000017934 (Gene tree)
Gene ID: 101165260
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 33737 bases
Position: chr17:30031666-30065402
Accession: 101165260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000022445	RRM_1	PF00076.22	4e-12	1	1
ENSORLP00000026899	RRM_1	PF00076.22	4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000022446	-	1752	XM_023965239	ENSORLP00000022445	288 (aa)	XP_023821007	H2MUI0
ENSORLT00000037431	-	4671	XM_011487082	ENSORLP00000026899	288 (aa)	XP_011485384	UPI0005CC1AD1

Gene Model

Click here to download ENSORLG00000017934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000017934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000017934	-	75	53.571	ENSORLG00000009999	-	68	53.540
ENSORLG00000017934	-	100	70.608	ENSORLG00000012719	-	100	72.635
ENSORLG00000017934	-	75	51.739	ENSORLG00000003144	-	66	54.701

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000017934	-	100	87.671	ENSAPOG00000008744	-	100	87.671	Acanthochromis_polyacanthus
ENSORLG00000017934	-	97	79.381	ENSACIG00000007143	-	97	79.725	Amphilophus_citrinellus
ENSORLG00000017934	-	100	89.384	ENSAOCG00000023599	-	100	89.726	Amphiprion_ocellaris
ENSORLG00000017934	-	100	71.622	ENSAOCG00000001605	-	100	73.311	Amphiprion_ocellaris
ENSORLG00000017934	-	97	83.390	ENSATEG00000022219	-	93	83.729	Anabas_testudineus
ENSORLG00000017934	-	84	71.837	ENSATEG00000023356	-	96	71.315	Anabas_testudineus
ENSORLG00000017934	-	100	71.284	ENSACLG00000006949	-	100	71.622	Astatotilapia_calliptera
ENSORLG00000017934	-	100	88.699	ENSACLG00000011720	-	100	88.699	Astatotilapia_calliptera
ENSORLG00000017934	-	100	63.087	ENSAMXG00000032617	-	90	66.045	Astyanax_mexicanus
ENSORLG00000017934	-	100	70.608	ENSAMXG00000019031	-	100	70.946	Astyanax_mexicanus
ENSORLG00000017934	-	100	77.397	ENSCSEG00000014237	-	100	77.740	Cynoglossus_semilaevis
ENSORLG00000017934	-	100	88.014	ENSCVAG00000013624	-	100	88.356	Cyprinodon_variegatus
ENSORLG00000017934	-	100	71.284	ENSCVAG00000018104	-	100	72.297	Cyprinodon_variegatus
ENSORLG00000017934	-	63	71.585	ENSDARG00000090292	ralyl	81	78.395	Danio_rerio
ENSORLG00000017934	-	97	61.972	ENSELUG00000001702	-	92	61.624	Esox_lucius
ENSORLG00000017934	-	57	73.333	ENSGMOG00000005914	-	100	73.333	Gadus_morhua
ENSORLG00000017934	-	61	78.652	ENSGACG00000004991	-	91	82.530	Gasterosteus_aculeatus
ENSORLG00000017934	-	100	88.699	ENSHBUG00000010040	-	100	89.041	Haplochromis_burtoni
ENSORLG00000017934	-	100	71.284	ENSHBUG00000015412	-	100	71.622	Haplochromis_burtoni
ENSORLG00000017934	-	100	70.946	ENSIPUG00000000507	ralyl	100	71.284	Ictalurus_punctatus
ENSORLG00000017934	-	100	84.932	ENSKMAG00000022093	-	100	85.959	Kryptolebias_marmoratus
ENSORLG00000017934	-	100	70.608	ENSKMAG00000018155	-	100	72.635	Kryptolebias_marmoratus
ENSORLG00000017934	-	100	84.932	ENSLBEG00000012873	-	100	85.274	Labrus_bergylta
ENSORLG00000017934	-	100	71.284	ENSLBEG00000011011	-	100	71.959	Labrus_bergylta
ENSORLG00000017934	-	100	69.932	ENSLOCG00000012787	ralyl	99	68.581	Lepisosteus_oculatus
ENSORLG00000017934	-	99	83.448	ENSMAMG00000001723	-	97	83.793	Mastacembelus_armatus
ENSORLG00000017934	-	100	88.699	ENSMZEG00005024447	-	100	88.699	Maylandia_zebra
ENSORLG00000017934	-	97	69.863	ENSMZEG00005018748	-	93	70.652	Maylandia_zebra
ENSORLG00000017934	-	97	79.054	ENSMMOG00000020441	-	86	81.419	Mola_mola
ENSORLG00000017934	-	100	87.671	ENSMALG00000019019	-	78	88.014	Monopterus_albus
ENSORLG00000017934	-	100	69.595	ENSMALG00000012952	-	100	70.270	Monopterus_albus
ENSORLG00000017934	-	97	69.521	ENSNBRG00000011376	-	93	72.101	Neolamprologus_brichardi
ENSORLG00000017934	-	97	75.685	ENSNBRG00000011206	-	97	79.381	Neolamprologus_brichardi
ENSORLG00000017934	-	100	98.958	ENSORLG00020000082	-	100	98.958	Oryzias_latipes_hni
ENSORLG00000017934	-	100	70.608	ENSORLG00020004438	-	100	72.635	Oryzias_latipes_hni
ENSORLG00000017934	-	100	70.608	ENSORLG00015004727	-	100	72.635	Oryzias_latipes_hsok
ENSORLG00000017934	-	100	99.306	ENSORLG00015004280	-	100	99.306	Oryzias_latipes_hsok
ENSORLG00000017934	-	100	91.034	ENSOMEG00000011821	-	100	91.034	Oryzias_melastigma
ENSORLG00000017934	-	100	70.608	ENSOMEG00000001170	-	100	72.635	Oryzias_melastigma
ENSORLG00000017934	-	100	70.307	ENSPKIG00000015926	-	100	70.648	Paramormyrops_kingsleyae
ENSORLG00000017934	-	97	71.134	ENSPMGG00000009532	-	91	72.628	Periophthalmus_magnuspinnatus
ENSORLG00000017934	-	79	68.240	ENSPMGG00000014481	-	95	69.528	Periophthalmus_magnuspinnatus
ENSORLG00000017934	-	97	83.673	ENSPFOG00000006120	-	99	84.014	Poecilia_formosa
ENSORLG00000017934	-	97	81.206	ENSPLAG00000009877	-	76	81.206	Poecilia_latipinna
ENSORLG00000017934	-	97	71.034	ENSPLAG00000011323	ralyl	94	73.358	Poecilia_latipinna
ENSORLG00000017934	-	97	71.034	ENSPMEG00000023847	ralyl	94	73.358	Poecilia_mexicana
ENSORLG00000017934	-	97	81.206	ENSPMEG00000013624	-	79	81.206	Poecilia_mexicana
ENSORLG00000017934	-	97	87.279	ENSPREG00000013805	-	100	81.410	Poecilia_reticulata
ENSORLG00000017934	-	97	70.690	ENSPREG00000001956	ralyl	94	72.628	Poecilia_reticulata
ENSORLG00000017934	-	97	69.863	ENSPNYG00000003548	-	93	70.652	Pundamilia_nyererei
ENSORLG00000017934	-	97	75.685	ENSPNYG00000008772	-	97	79.381	Pundamilia_nyererei
ENSORLG00000017934	-	100	69.932	ENSPNAG00000000498	-	88	70.270	Pygocentrus_nattereri
ENSORLG00000017934	-	100	66.096	ENSPNAG00000026098	-	100	65.753	Pygocentrus_nattereri
ENSORLG00000017934	-	100	59.386	ENSSFOG00015004575	-	100	59.727	Scleropages_formosus
ENSORLG00000017934	-	100	72.297	ENSSFOG00015009401	-	100	72.635	Scleropages_formosus
ENSORLG00000017934	-	97	83.158	ENSSMAG00000015907	-	93	83.509	Scophthalmus_maximus
ENSORLG00000017934	-	100	70.946	ENSSMAG00000005608	-	100	71.284	Scophthalmus_maximus
ENSORLG00000017934	-	100	70.946	ENSSDUG00000007587	-	100	71.622	Seriola_dumerili
ENSORLG00000017934	-	100	89.726	ENSSDUG00000012473	-	100	90.068	Seriola_dumerili
ENSORLG00000017934	-	100	70.270	ENSSLDG00000020603	-	100	71.622	Seriola_lalandi_dorsalis
ENSORLG00000017934	-	100	89.384	ENSSLDG00000011534	-	100	89.726	Seriola_lalandi_dorsalis
ENSORLG00000017934	-	97	76.512	ENSSPAG00000013858	-	96	74.828	Stegastes_partitus
ENSORLG00000017934	-	97	81.979	ENSTRUG00000003829	-	95	81.272	Takifugu_rubripes
ENSORLG00000017934	-	97	78.571	ENSTNIG00000005594	-	99	78.571	Tetraodon_nigroviridis
ENSORLG00000017934	-	100	63.087	ENSXETG00000017729	ralyl	99	63.087	Xenopus_tropicalis
ENSORLG00000017934	-	97	68.792	ENSXCOG00000015156	-	88	71.277	Xiphophorus_couchianus
ENSORLG00000017934	-	100	87.329	ENSXMAG00000007614	-	100	87.671	Xiphophorus_maculatus
ENSORLG00000017934	-	100	71.622	ENSXMAG00000008396	-	100	73.311	Xiphophorus_maculatus