EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000017954 (Gene tree)
Gene ID: 101164766
Gene Symbol: larp1b
Alias: -
Full Name: la-related protein 1B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 22971 bases
Position: chr22:21601921-21624891
Accession: 101164766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000022477	La	PF05383.17	1.1e-20	1	1
ENSORLP00000022474	La	PF05383.17	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000022475	-	5674	XM_023951750	ENSORLP00000022474	1072 (aa)	XP_023807518	H2MUK9
ENSORLT00000022478	-	5506	XM_023951754	ENSORLP00000022477	1016 (aa)	XP_023807522	H2MUL2

Gene Model

Click here to download ENSORLG00000017954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000017954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000017954	larp1b	89	53.103	ENSORLG00000000824	larp1	83	61.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000017954	larp1b	87	54.842	ENSG00000138709	LARP1B	97	55.844	Homo_sapiens
ENSORLG00000017954	larp1b	100	77.304	ENSAPOG00000020101	larp1b	97	77.545	Acanthochromis_polyacanthus
ENSORLG00000017954	larp1b	52	51.207	ENSAMEG00000002748	LARP1B	99	50.783	Ailuropoda_melanoleuca
ENSORLG00000017954	larp1b	100	72.100	ENSACIG00000023890	larp1b	97	73.445	Amphilophus_citrinellus
ENSORLG00000017954	larp1b	90	72.128	ENSAOCG00000014268	larp1b	99	71.672	Amphiprion_ocellaris
ENSORLG00000017954	larp1b	100	76.663	ENSAPEG00000004126	larp1b	97	76.786	Amphiprion_percula
ENSORLG00000017954	larp1b	100	75.553	ENSATEG00000017849	larp1b	97	76.337	Anabas_testudineus
ENSORLG00000017954	larp1b	83	53.609	ENSAPLG00000010129	LARP1B	100	51.892	Anas_platyrhynchos
ENSORLG00000017954	larp1b	84	55.319	ENSACAG00000011338	LARP1B	93	56.277	Anolis_carolinensis
ENSORLG00000017954	larp1b	63	52.263	ENSANAG00000034618	LARP1B	78	53.903	Aotus_nancymaae
ENSORLG00000017954	larp1b	100	74.680	ENSACLG00000011948	larp1b	97	75.658	Astatotilapia_calliptera
ENSORLG00000017954	larp1b	92	57.041	ENSAMXG00000006805	larp1b	90	57.673	Astyanax_mexicanus
ENSORLG00000017954	larp1b	89	54.636	ENSBTAG00000012135	LARP1B	95	51.595	Bos_taurus
ENSORLG00000017954	larp1b	82	56.278	ENSCJAG00000003338	LARP1B	99	56.847	Callithrix_jacchus
ENSORLG00000017954	larp1b	82	58.920	ENSCAFG00000003831	LARP1B	99	58.499	Canis_familiaris
ENSORLG00000017954	larp1b	84	56.296	ENSCAFG00020018899	LARP1B	95	57.065	Canis_lupus_dingo
ENSORLG00000017954	larp1b	84	54.995	ENSCHIG00000023144	LARP1B	96	55.340	Capra_hircus
ENSORLG00000017954	larp1b	83	55.424	ENSCCAG00000021948	LARP1B	99	55.305	Cebus_capucinus
ENSORLG00000017954	larp1b	82	55.375	ENSCATG00000013541	LARP1B	97	55.255	Cercocebus_atys
ENSORLG00000017954	larp1b	82	56.678	ENSCSAG00000003582	LARP1B	97	56.176	Chlorocebus_sabaeus
ENSORLG00000017954	larp1b	83	51.432	ENSCHOG00000005354	LARP1B	77	56.334	Choloepus_hoffmanni
ENSORLG00000017954	larp1b	89	53.685	ENSCPBG00000017480	LARP1B	92	53.600	Chrysemys_picta_bellii
ENSORLG00000017954	larp1b	81	56.849	ENSCANG00000026958	LARP1B	97	56.720	Colobus_angolensis_palliatus
ENSORLG00000017954	larp1b	100	77.347	ENSCSEG00000013519	larp1b	93	78.982	Cynoglossus_semilaevis
ENSORLG00000017954	larp1b	100	72.628	ENSCVAG00000005046	larp1b	96	74.480	Cyprinodon_variegatus
ENSORLG00000017954	larp1b	99	60.646	ENSDARG00000061169	larp1b	92	61.825	Danio_rerio
ENSORLG00000017954	larp1b	65	52.806	ENSETEG00000012497	LARP1B	75	51.836	Echinops_telfairi
ENSORLG00000017954	larp1b	90	46.442	ENSEBUG00000003668	larp1b	93	47.262	Eptatretus_burgeri
ENSORLG00000017954	larp1b	85	54.916	ENSEASG00005018106	LARP1B	99	54.658	Equus_asinus_asinus
ENSORLG00000017954	larp1b	89	54.254	ENSECAG00000001088	LARP1B	86	54.133	Equus_caballus
ENSORLG00000017954	larp1b	88	53.413	ENSELUG00000023774	larp1b	93	63.434	Esox_lucius
ENSORLG00000017954	larp1b	82	54.447	ENSFALG00000008098	LARP1B	96	53.471	Ficedula_albicollis
ENSORLG00000017954	larp1b	100	76.351	ENSFHEG00000010264	larp1b	94	77.137	Fundulus_heteroclitus
ENSORLG00000017954	larp1b	88	65.815	ENSGMOG00000005207	larp1b	86	72.202	Gadus_morhua
ENSORLG00000017954	larp1b	90	52.733	ENSGALG00000010207	LARP1B	95	51.488	Gallus_gallus
ENSORLG00000017954	larp1b	89	78.175	ENSGAFG00000012012	larp1b	97	77.960	Gambusia_affinis
ENSORLG00000017954	larp1b	100	66.578	ENSGACG00000004609	larp1b	97	67.315	Gasterosteus_aculeatus
ENSORLG00000017954	larp1b	87	54.802	ENSGAGG00000017209	LARP1B	89	54.397	Gopherus_agassizii
ENSORLG00000017954	larp1b	82	55.965	ENSGGOG00000015900	LARP1B	97	55.844	Gorilla_gorilla
ENSORLG00000017954	larp1b	100	76.062	ENSHBUG00000009730	larp1b	97	77.137	Haplochromis_burtoni
ENSORLG00000017954	larp1b	69	76.371	ENSHCOG00000000918	larp1b	97	79.265	Hippocampus_comes
ENSORLG00000017954	larp1b	94	61.678	ENSIPUG00000012138	larp1b	88	61.216	Ictalurus_punctatus
ENSORLG00000017954	larp1b	99	72.621	ENSKMAG00000011589	larp1b	95	77.646	Kryptolebias_marmoratus
ENSORLG00000017954	larp1b	100	79.848	ENSLBEG00000005655	larp1b	92	81.258	Labrus_bergylta
ENSORLG00000017954	larp1b	91	57.443	ENSLACG00000015247	LARP1B	89	56.843	Latimeria_chalumnae
ENSORLG00000017954	larp1b	88	62.958	ENSLOCG00000010684	larp1b	96	57.692	Lepisosteus_oculatus
ENSORLG00000017954	larp1b	82	56.352	ENSMFAG00000002218	LARP1B	97	56.230	Macaca_fascicularis
ENSORLG00000017954	larp1b	82	56.230	ENSMMUG00000021347	LARP1B	97	55.892	Macaca_mulatta
ENSORLG00000017954	larp1b	81	53.659	ENSMNEG00000030406	LARP1B	97	53.057	Macaca_nemestrina
ENSORLG00000017954	larp1b	81	56.278	ENSMLEG00000009306	LARP1B	97	56.194	Mandrillus_leucophaeus
ENSORLG00000017954	larp1b	99	76.167	ENSMAMG00000000081	larp1b	97	76.570	Mastacembelus_armatus
ENSORLG00000017954	larp1b	73	78.209	ENSMZEG00005002545	larp1b	92	80.362	Maylandia_zebra
ENSORLG00000017954	larp1b	77	55.345	ENSMGAG00000004809	LARP1B	74	57.784	Meleagris_gallopavo
ENSORLG00000017954	larp1b	84	56.959	ENSMICG00000036111	LARP1B	98	57.097	Microcebus_murinus
ENSORLG00000017954	larp1b	89	54.247	ENSMODG00000012300	LARP1B	94	52.455	Monodelphis_domestica
ENSORLG00000017954	larp1b	100	74.128	ENSMALG00000003638	larp1b	92	80.263	Monopterus_albus
ENSORLG00000017954	larp1b	88	55.061	ENSMPUG00000017365	LARP1B	86	54.637	Mustela_putorius_furo
ENSORLG00000017954	larp1b	83	53.439	ENSMLUG00000010229	LARP1B	99	53.263	Myotis_lucifugus
ENSORLG00000017954	larp1b	93	72.081	ENSNBRG00000023846	larp1b	97	74.011	Neolamprologus_brichardi
ENSORLG00000017954	larp1b	84	54.440	ENSNLEG00000013819	LARP1B	97	55.351	Nomascus_leucogenys
ENSORLG00000017954	larp1b	64	58.321	ENSMEUG00000010308	LARP1B	75	58.032	Notamacropus_eugenii
ENSORLG00000017954	larp1b	76	51.117	ENSOPRG00000005478	LARP1B	76	53.648	Ochotona_princeps
ENSORLG00000017954	larp1b	87	75.306	ENSONIG00000012386	larp1b	100	75.026	Oreochromis_niloticus
ENSORLG00000017954	larp1b	84	54.593	ENSOCUG00000013330	LARP1B	96	55.956	Oryctolagus_cuniculus
ENSORLG00000017954	larp1b	100	98.787	ENSORLG00020013081	larp1b	100	98.787	Oryzias_latipes_hni
ENSORLG00000017954	larp1b	100	98.031	ENSORLG00015009580	larp1b	100	98.031	Oryzias_latipes_hsok
ENSORLG00000017954	larp1b	100	88.596	ENSOMEG00000004210	larp1b	100	87.914	Oryzias_melastigma
ENSORLG00000017954	larp1b	82	57.743	ENSOGAG00000005771	LARP1B	100	56.674	Otolemur_garnettii
ENSORLG00000017954	larp1b	82	56.203	ENSOARG00000015300	LARP1B	98	55.591	Ovis_aries
ENSORLG00000017954	larp1b	82	56.074	ENSPPAG00000030439	LARP1B	97	55.952	Pan_paniscus
ENSORLG00000017954	larp1b	82	56.074	ENSPTRG00000016437	LARP1B	97	55.952	Pan_troglodytes
ENSORLG00000017954	larp1b	82	56.352	ENSPANG00000012488	LARP1B	97	56.230	Papio_anubis
ENSORLG00000017954	larp1b	86	56.222	ENSPKIG00000014360	larp1b	96	55.925	Paramormyrops_kingsleyae
ENSORLG00000017954	larp1b	86	55.151	ENSPSIG00000012885	LARP1B	99	54.819	Pelodiscus_sinensis
ENSORLG00000017954	larp1b	76	69.938	ENSPMGG00000007207	larp1b	86	74.930	Periophthalmus_magnuspinnatus
ENSORLG00000017954	larp1b	60	57.287	ENSPMAG00000002700	larp1b	97	49.844	Petromyzon_marinus
ENSORLG00000017954	larp1b	87	55.624	ENSPCIG00000026516	LARP1B	93	63.254	Phascolarctos_cinereus
ENSORLG00000017954	larp1b	63	70.317	ENSPFOG00000022837	-	99	70.461	Poecilia_formosa
ENSORLG00000017954	larp1b	100	72.841	ENSPFOG00000019519	larp1b	98	73.492	Poecilia_formosa
ENSORLG00000017954	larp1b	100	74.226	ENSPLAG00000007115	larp1b	97	75.758	Poecilia_latipinna
ENSORLG00000017954	larp1b	100	76.369	ENSPMEG00000001224	larp1b	98	77.372	Poecilia_mexicana
ENSORLG00000017954	larp1b	84	53.960	ENSPCAG00000007546	LARP1B	97	53.496	Procavia_capensis
ENSORLG00000017954	larp1b	74	58.333	ENSPCOG00000021874	LARP1B	98	60.870	Propithecus_coquereli
ENSORLG00000017954	larp1b	84	51.554	ENSPVAG00000005373	LARP1B	98	51.623	Pteropus_vampyrus
ENSORLG00000017954	larp1b	73	76.711	ENSPNYG00000017357	larp1b	92	78.493	Pundamilia_nyererei
ENSORLG00000017954	larp1b	93	60.300	ENSPNAG00000008823	larp1b	89	62.196	Pygocentrus_nattereri
ENSORLG00000017954	larp1b	82	56.352	ENSRROG00000030771	LARP1B	97	56.230	Rhinopithecus_roxellana
ENSORLG00000017954	larp1b	61	51.286	ENSSHAG00000014474	LARP1B	99	51.580	Sarcophilus_harrisii
ENSORLG00000017954	larp1b	84	78.322	ENSSMAG00000006347	larp1b	95	77.908	Scophthalmus_maximus
ENSORLG00000017954	larp1b	100	75.553	ENSSDUG00000004182	larp1b	96	77.000	Seriola_dumerili
ENSORLG00000017954	larp1b	95	69.846	ENSSLDG00000014613	larp1b	98	75.775	Seriola_lalandi_dorsalis
ENSORLG00000017954	larp1b	81	55.995	ENSSPUG00000011837	LARP1B	78	62.739	Sphenodon_punctatus
ENSORLG00000017954	larp1b	96	76.791	ENSSPAG00000017772	larp1b	97	75.653	Stegastes_partitus
ENSORLG00000017954	larp1b	89	53.769	ENSSSCG00000034280	LARP1B	98	76.404	Sus_scrofa
ENSORLG00000017954	larp1b	79	56.813	ENSTGUG00000002098	-	84	61.473	Taeniopygia_guttata
ENSORLG00000017954	larp1b	99	73.294	ENSTRUG00000005612	larp1b	97	74.245	Takifugu_rubripes
ENSORLG00000017954	larp1b	88	73.604	ENSTNIG00000012398	larp1b	92	79.764	Tetraodon_nigroviridis
ENSORLG00000017954	larp1b	57	59.868	ENSTBEG00000004177	LARP1B	67	58.333	Tupaia_belangeri
ENSORLG00000017954	larp1b	76	56.212	ENSTTRG00000012984	LARP1B	76	59.207	Tursiops_truncatus
ENSORLG00000017954	larp1b	84	56.051	ENSUMAG00000007373	LARP1B	95	56.291	Ursus_maritimus
ENSORLG00000017954	larp1b	66	54.775	ENSVPAG00000007223	LARP1B	78	54.494	Vicugna_pacos
ENSORLG00000017954	larp1b	84	56.250	ENSVVUG00000011307	LARP1B	99	56.396	Vulpes_vulpes
ENSORLG00000017954	larp1b	88	51.029	ENSXETG00000022512	larp1b	94	50.461	Xenopus_tropicalis
ENSORLG00000017954	larp1b	89	69.987	ENSXCOG00000004435	larp1b	92	71.466	Xiphophorus_couchianus
ENSORLG00000017954	larp1b	100	77.361	ENSXMAG00000008150	larp1b	97	75.257	Xiphophorus_maculatus