EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000018127 (Gene tree)
Gene ID: 101171879
Gene Symbol: rnaseh1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 11362 bases
Position: chr24:22437794-22449155
Accession: 101171879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000022700	RNase_H	PF00075.24	3.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000022701	-	3777	XM_020714388	ENSORLP00000022700	276 (aa)	XP_020570047	H2MV74

Gene Model

Click here to download ENSORLG00000018127's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000018127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000018127	rnaseh1	94	55.762	ENSG00000171865	RNASEH1	89	55.762	Homo_sapiens
ENSORLG00000018127	rnaseh1	98	76.727	ENSAPOG00000000412	rnaseh1	91	76.727	Acanthochromis_polyacanthus
ENSORLG00000018127	rnaseh1	94	55.094	ENSAMEG00000018433	RNASEH1	89	55.472	Ailuropoda_melanoleuca
ENSORLG00000018127	rnaseh1	97	77.323	ENSACIG00000014666	rnaseh1	90	78.439	Amphilophus_citrinellus
ENSORLG00000018127	rnaseh1	98	78.909	ENSAOCG00000015210	rnaseh1	91	78.909	Amphiprion_ocellaris
ENSORLG00000018127	rnaseh1	98	79.636	ENSAPEG00000014104	rnaseh1	91	79.636	Amphiprion_percula
ENSORLG00000018127	rnaseh1	98	77.455	ENSATEG00000000598	rnaseh1	97	77.455	Anabas_testudineus
ENSORLG00000018127	rnaseh1	90	55.426	ENSAPLG00000001961	RNASEH1	100	55.426	Anas_platyrhynchos
ENSORLG00000018127	rnaseh1	96	48.344	ENSACAG00000016857	rnaseh1	93	48.013	Anolis_carolinensis
ENSORLG00000018127	rnaseh1	94	55.056	ENSANAG00000024055	RNASEH1	89	55.056	Aotus_nancymaae
ENSORLG00000018127	rnaseh1	97	75.180	ENSACLG00000006741	rnaseh1	92	75.088	Astatotilapia_calliptera
ENSORLG00000018127	rnaseh1	95	58.736	ENSAMXG00000042940	rnaseh1	97	57.401	Astyanax_mexicanus
ENSORLG00000018127	rnaseh1	95	57.519	ENSBTAG00000016235	RNASEH1	91	57.519	Bos_taurus
ENSORLG00000018127	rnaseh1	98	35.766	WBGene00004382	rnh-1.0	100	35.401	Caenorhabditis_elegans
ENSORLG00000018127	rnaseh1	94	53.704	ENSCJAG00000035450	RNASEH1	89	53.704	Callithrix_jacchus
ENSORLG00000018127	rnaseh1	94	56.274	ENSCAFG00000003259	RNASEH1	89	56.274	Canis_familiaris
ENSORLG00000018127	rnaseh1	54	66.443	ENSCAFG00020004994	RNASEH1	96	66.443	Canis_lupus_dingo
ENSORLG00000018127	rnaseh1	87	45.565	ENSCHIG00000022230	-	99	44.856	Capra_hircus
ENSORLG00000018127	rnaseh1	95	58.491	ENSCHIG00000022264	-	90	58.052	Capra_hircus
ENSORLG00000018127	rnaseh1	95	55.725	ENSTSYG00000012926	RNASEH1	89	55.725	Carlito_syrichta
ENSORLG00000018127	rnaseh1	89	58.065	ENSCAPG00000004813	RNASEH1	99	58.065	Cavia_aperea
ENSORLG00000018127	rnaseh1	95	58.113	ENSCPOG00000022278	Rnaseh1	87	58.113	Cavia_porcellus
ENSORLG00000018127	rnaseh1	94	55.185	ENSCCAG00000038017	RNASEH1	89	55.185	Cebus_capucinus
ENSORLG00000018127	rnaseh1	94	54.135	ENSCATG00000016515	-	89	54.135	Cercocebus_atys
ENSORLG00000018127	rnaseh1	94	48.352	ENSCATG00000016818	-	89	50.190	Cercocebus_atys
ENSORLG00000018127	rnaseh1	94	57.414	ENSCLAG00000002440	RNASEH1	89	57.414	Chinchilla_lanigera
ENSORLG00000018127	rnaseh1	94	54.135	ENSCSAG00000006943	RNASEH1	89	55.172	Chlorocebus_sabaeus
ENSORLG00000018127	rnaseh1	64	62.500	ENSCHOG00000008547	RNASEH1	74	69.536	Choloepus_hoffmanni
ENSORLG00000018127	rnaseh1	95	55.185	ENSCPBG00000021620	RNASEH1	99	53.791	Chrysemys_picta_bellii
ENSORLG00000018127	rnaseh1	95	37.676	ENSCING00000014054	-	93	37.676	Ciona_intestinalis
ENSORLG00000018127	rnaseh1	80	40.417	ENSCSAVG00000000009	-	96	40.870	Ciona_savignyi
ENSORLG00000018127	rnaseh1	94	54.887	ENSCANG00000037763	RNASEH1	89	54.887	Colobus_angolensis_palliatus
ENSORLG00000018127	rnaseh1	94	56.654	ENSCGRG00001008950	Rnaseh1	89	53.237	Cricetulus_griseus_chok1gshd
ENSORLG00000018127	rnaseh1	94	56.654	ENSCGRG00000006029	Rnaseh1	89	53.237	Cricetulus_griseus_crigri
ENSORLG00000018127	rnaseh1	99	67.376	ENSCSEG00000005741	rnaseh1	98	67.376	Cynoglossus_semilaevis
ENSORLG00000018127	rnaseh1	100	76.842	ENSCVAG00000018717	rnaseh1	93	76.842	Cyprinodon_variegatus
ENSORLG00000018127	rnaseh1	96	65.314	ENSDARG00000042571	rnaseh1	98	65.314	Danio_rerio
ENSORLG00000018127	rnaseh1	94	56.757	ENSDNOG00000016056	RNASEH1	89	56.757	Dasypus_novemcinctus
ENSORLG00000018127	rnaseh1	94	56.870	ENSDORG00000000704	Rnaseh1	89	56.015	Dipodomys_ordii
ENSORLG00000018127	rnaseh1	94	40.206	FBgn0023171	rnh1	92	38.225	Drosophila_melanogaster
ENSORLG00000018127	rnaseh1	95	52.256	ENSETEG00000012674	RNASEH1	89	53.053	Echinops_telfairi
ENSORLG00000018127	rnaseh1	97	46.350	ENSEBUG00000006116	rnaseh1	79	46.667	Eptatretus_burgeri
ENSORLG00000018127	rnaseh1	95	45.704	ENSEBUG00000008898	rnaseh1	99	45.704	Eptatretus_burgeri
ENSORLG00000018127	rnaseh1	94	58.015	ENSEASG00005022200	RNASEH1	87	58.015	Equus_asinus_asinus
ENSORLG00000018127	rnaseh1	94	58.015	ENSECAG00000020695	RNASEH1	87	58.015	Equus_caballus
ENSORLG00000018127	rnaseh1	96	72.628	ENSELUG00000010112	rnaseh1	92	71.898	Esox_lucius
ENSORLG00000018127	rnaseh1	94	54.924	ENSFCAG00000025832	RNASEH1	89	55.597	Felis_catus
ENSORLG00000018127	rnaseh1	96	54.255	ENSFALG00000002069	RNASEH1	93	55.197	Ficedula_albicollis
ENSORLG00000018127	rnaseh1	94	57.143	ENSFDAG00000002035	RNASEH1	79	56.757	Fukomys_damarensis
ENSORLG00000018127	rnaseh1	96	70.833	ENSGMOG00000013818	rnaseh1	90	70.833	Gadus_morhua
ENSORLG00000018127	rnaseh1	95	56.618	ENSGALG00000016389	RNASEH1	93	56.618	Gallus_gallus
ENSORLG00000018127	rnaseh1	96	73.333	ENSGAFG00000001776	rnaseh1	91	73.333	Gambusia_affinis
ENSORLG00000018127	rnaseh1	96	72.694	ENSGACG00000011935	rnaseh1	91	72.694	Gasterosteus_aculeatus
ENSORLG00000018127	rnaseh1	95	56.506	ENSGAGG00000009150	RNASEH1	61	56.506	Gopherus_agassizii
ENSORLG00000018127	rnaseh1	94	55.805	ENSGGOG00000034822	RNASEH1	89	55.805	Gorilla_gorilla
ENSORLG00000018127	rnaseh1	98	75.627	ENSHBUG00000004666	rnaseh1	90	76.703	Haplochromis_burtoni
ENSORLG00000018127	rnaseh1	94	55.303	ENSHGLG00000002585	Rnaseh1	82	55.303	Heterocephalus_glaber_female
ENSORLG00000018127	rnaseh1	94	55.303	ENSHGLG00100005105	Rnaseh1	82	55.303	Heterocephalus_glaber_male
ENSORLG00000018127	rnaseh1	97	70.863	ENSHCOG00000012329	rnaseh1	91	70.863	Hippocampus_comes
ENSORLG00000018127	rnaseh1	96	61.654	ENSIPUG00000023060	rnaseh1	98	60.000	Ictalurus_punctatus
ENSORLG00000018127	rnaseh1	94	55.849	ENSSTOG00000012774	RNASEH1	91	55.849	Ictidomys_tridecemlineatus
ENSORLG00000018127	rnaseh1	95	50.575	ENSJJAG00000021481	-	89	49.808	Jaculus_jaculus
ENSORLG00000018127	rnaseh1	86	53.750	ENSJJAG00000020238	Rnaseh1	90	52.542	Jaculus_jaculus
ENSORLG00000018127	rnaseh1	92	45.174	ENSJJAG00000008994	-	89	45.174	Jaculus_jaculus
ENSORLG00000018127	rnaseh1	99	75.912	ENSKMAG00000001373	rnaseh1	92	75.912	Kryptolebias_marmoratus
ENSORLG00000018127	rnaseh1	96	77.444	ENSLBEG00000004480	rnaseh1	97	77.444	Labrus_bergylta
ENSORLG00000018127	rnaseh1	96	56.272	ENSLACG00000007100	RNASEH1	90	56.989	Latimeria_chalumnae
ENSORLG00000018127	rnaseh1	97	60.714	ENSLOCG00000017212	rnaseh1	100	59.498	Lepisosteus_oculatus
ENSORLG00000018127	rnaseh1	94	56.929	ENSLAFG00000015091	RNASEH1	89	55.985	Loxodonta_africana
ENSORLG00000018127	rnaseh1	95	50.000	ENSMFAG00000002323	-	90	50.570	Macaca_fascicularis
ENSORLG00000018127	rnaseh1	94	54.753	ENSMFAG00000000063	-	89	54.753	Macaca_fascicularis
ENSORLG00000018127	rnaseh1	95	49.458	ENSMMUG00000019280	-	90	50.376	Macaca_mulatta
ENSORLG00000018127	rnaseh1	95	50.000	ENSMNEG00000029676	-	90	49.270	Macaca_nemestrina
ENSORLG00000018127	rnaseh1	94	55.133	ENSMNEG00000040183	-	89	55.133	Macaca_nemestrina
ENSORLG00000018127	rnaseh1	88	54.217	ENSMLEG00000039352	-	98	54.217	Mandrillus_leucophaeus
ENSORLG00000018127	rnaseh1	95	52.060	ENSMLEG00000028662	-	90	51.711	Mandrillus_leucophaeus
ENSORLG00000018127	rnaseh1	99	75.899	ENSMAMG00000019725	rnaseh1	98	75.540	Mastacembelus_armatus
ENSORLG00000018127	rnaseh1	97	75.180	ENSMZEG00005013006	rnaseh1	92	75.088	Maylandia_zebra
ENSORLG00000018127	rnaseh1	84	54.688	ENSMGAG00000013979	RNASEH1	99	54.217	Meleagris_gallopavo
ENSORLG00000018127	rnaseh1	94	57.414	ENSMAUG00000014957	Rnaseh1	89	56.322	Mesocricetus_auratus
ENSORLG00000018127	rnaseh1	94	55.849	ENSMICG00000033156	RNASEH1	88	56.015	Microcebus_murinus
ENSORLG00000018127	rnaseh1	94	57.037	ENSMOCG00000015522	Rnaseh1	89	56.391	Microtus_ochrogaster
ENSORLG00000018127	rnaseh1	99	72.202	ENSMMOG00000015902	rnaseh1	92	72.202	Mola_mola
ENSORLG00000018127	rnaseh1	95	56.705	ENSMODG00000014491	-	89	54.348	Monodelphis_domestica
ENSORLG00000018127	rnaseh1	88	49.174	ENSMODG00000028814	-	96	49.174	Monodelphis_domestica
ENSORLG00000018127	rnaseh1	99	77.617	ENSMALG00000010565	rnaseh1	92	77.617	Monopterus_albus
ENSORLG00000018127	rnaseh1	94	57.034	MGP_CAROLIEiJ_G0017660	Rnaseh1	89	56.274	Mus_caroli
ENSORLG00000018127	rnaseh1	94	57.414	ENSMUSG00000020630	Rnaseh1	89	56.654	Mus_musculus
ENSORLG00000018127	rnaseh1	94	56.180	MGP_PahariEiJ_G0029418	Rnaseh1	89	56.654	Mus_pahari
ENSORLG00000018127	rnaseh1	94	57.414	MGP_SPRETEiJ_G0018502	Rnaseh1	89	56.274	Mus_spretus
ENSORLG00000018127	rnaseh1	63	59.770	ENSMPUG00000012984	RNASEH1	81	61.078	Mustela_putorius_furo
ENSORLG00000018127	rnaseh1	94	57.358	ENSNGAG00000015966	Rnaseh1	84	56.410	Nannospalax_galili
ENSORLG00000018127	rnaseh1	97	75.180	ENSNBRG00000008739	rnaseh1	92	75.088	Neolamprologus_brichardi
ENSORLG00000018127	rnaseh1	87	49.791	ENSNLEG00000000059	-	88	49.791	Nomascus_leucogenys
ENSORLG00000018127	rnaseh1	94	48.120	ENSNLEG00000015400	RNASEH1	87	47.744	Nomascus_leucogenys
ENSORLG00000018127	rnaseh1	95	37.165	ENSMEUG00000003610	-	90	37.165	Notamacropus_eugenii
ENSORLG00000018127	rnaseh1	95	55.431	ENSOPRG00000005072	RNASEH1	90	55.303	Ochotona_princeps
ENSORLG00000018127	rnaseh1	94	58.687	ENSODEG00000000235	Rnaseh1	86	58.687	Octodon_degus
ENSORLG00000018127	rnaseh1	97	75.986	ENSONIG00000018697	rnaseh1	100	76.344	Oreochromis_niloticus
ENSORLG00000018127	rnaseh1	94	56.061	ENSOCUG00000006117	RNASEH1	89	55.894	Oryctolagus_cuniculus
ENSORLG00000018127	rnaseh1	100	99.638	ENSORLG00020013660	rnaseh1	93	99.638	Oryzias_latipes_hni
ENSORLG00000018127	rnaseh1	100	98.913	ENSORLG00015011338	rnaseh1	93	98.913	Oryzias_latipes_hsok
ENSORLG00000018127	rnaseh1	88	85.950	ENSOMEG00000004710	rnaseh1	92	85.950	Oryzias_melastigma
ENSORLG00000018127	rnaseh1	94	58.175	ENSOGAG00000017176	RNASEH1	89	58.175	Otolemur_garnettii
ENSORLG00000018127	rnaseh1	95	51.095	ENSOARG00000005386	RNASEH1	90	50.362	Ovis_aries
ENSORLG00000018127	rnaseh1	94	55.762	ENSPPAG00000034221	RNASEH1	89	55.762	Pan_paniscus
ENSORLG00000018127	rnaseh1	94	54.924	ENSPPRG00000015513	RNASEH1	89	55.597	Panthera_pardus
ENSORLG00000018127	rnaseh1	87	55.285	ENSPTIG00000019034	RNASEH1	83	55.823	Panthera_tigris_altaica
ENSORLG00000018127	rnaseh1	94	55.762	ENSPTRG00000011614	RNASEH1	89	55.762	Pan_troglodytes
ENSORLG00000018127	rnaseh1	87	48.016	ENSPTRG00000043403	-	91	48.016	Pan_troglodytes
ENSORLG00000018127	rnaseh1	94	54.511	ENSPANG00000000443	RNASEH1	97	54.400	Papio_anubis
ENSORLG00000018127	rnaseh1	94	49.807	ENSPANG00000018246	-	88	49.807	Papio_anubis
ENSORLG00000018127	rnaseh1	96	60.650	ENSPKIG00000003146	rnaseh1	99	60.150	Paramormyrops_kingsleyae
ENSORLG00000018127	rnaseh1	95	53.285	ENSPSIG00000002937	RNASEH1	99	52.416	Pelodiscus_sinensis
ENSORLG00000018127	rnaseh1	96	66.792	ENSPMGG00000017463	rnaseh1	94	64.925	Periophthalmus_magnuspinnatus
ENSORLG00000018127	rnaseh1	94	55.769	ENSPEMG00000022465	-	89	56.154	Peromyscus_maniculatus_bairdii
ENSORLG00000018127	rnaseh1	55	35.714	ENSPCIG00000026047	-	87	35.714	Phascolarctos_cinereus
ENSORLG00000018127	rnaseh1	95	55.939	ENSPCIG00000023334	-	91	54.887	Phascolarctos_cinereus
ENSORLG00000018127	rnaseh1	97	72.894	ENSPFOG00000002841	rnaseh1	92	72.894	Poecilia_formosa
ENSORLG00000018127	rnaseh1	70	61.658	ENSPLAG00000021349	-	76	60.104	Poecilia_latipinna
ENSORLG00000018127	rnaseh1	97	73.260	ENSPMEG00000016826	rnaseh1	92	73.260	Poecilia_mexicana
ENSORLG00000018127	rnaseh1	97	71.685	ENSPREG00000012197	rnaseh1	92	71.685	Poecilia_reticulata
ENSORLG00000018127	rnaseh1	94	45.865	ENSPPYG00000025873	RNASEH1	88	45.865	Pongo_abelii
ENSORLG00000018127	rnaseh1	87	49.593	ENSPPYG00000008067	-	90	49.593	Pongo_abelii
ENSORLG00000018127	rnaseh1	95	56.296	ENSPCAG00000002500	RNASEH1	90	55.185	Procavia_capensis
ENSORLG00000018127	rnaseh1	94	49.811	ENSPCOG00000019444	RNASEH1	89	47.794	Propithecus_coquereli
ENSORLG00000018127	rnaseh1	95	52.290	ENSPVAG00000002070	RNASEH1	90	51.908	Pteropus_vampyrus
ENSORLG00000018127	rnaseh1	97	75.180	ENSPNYG00000001292	rnaseh1	92	75.088	Pundamilia_nyererei
ENSORLG00000018127	rnaseh1	96	64.706	ENSPNAG00000022344	rnaseh1	91	64.151	Pygocentrus_nattereri
ENSORLG00000018127	rnaseh1	94	56.554	ENSRNOG00000008584	Rnaseh1	89	56.923	Rattus_norvegicus
ENSORLG00000018127	rnaseh1	94	54.887	ENSRBIG00000034222	RNASEH1	88	54.887	Rhinopithecus_bieti
ENSORLG00000018127	rnaseh1	94	54.511	ENSRROG00000041761	RNASEH1	88	54.511	Rhinopithecus_roxellana
ENSORLG00000018127	rnaseh1	94	47.727	YMR234W	-	95	34.066	Saccharomyces_cerevisiae
ENSORLG00000018127	rnaseh1	94	54.444	ENSSBOG00000025411	RNASEH1	89	54.444	Saimiri_boliviensis_boliviensis
ENSORLG00000018127	rnaseh1	96	55.390	ENSSHAG00000013051	RNASEH1	89	55.390	Sarcophilus_harrisii
ENSORLG00000018127	rnaseh1	97	62.082	ENSSFOG00015002709	rnaseh1	92	62.454	Scleropages_formosus
ENSORLG00000018127	rnaseh1	99	77.061	ENSSMAG00000007586	rnaseh1	92	77.061	Scophthalmus_maximus
ENSORLG00000018127	rnaseh1	99	77.061	ENSSDUG00000008217	rnaseh1	98	77.061	Seriola_dumerili
ENSORLG00000018127	rnaseh1	91	76.078	ENSSLDG00000000442	rnaseh1	95	76.772	Seriola_lalandi_dorsalis
ENSORLG00000018127	rnaseh1	96	54.380	ENSSPUG00000006644	RNASEH1	93	54.182	Sphenodon_punctatus
ENSORLG00000018127	rnaseh1	99	77.778	ENSSPAG00000009353	rnaseh1	92	77.778	Stegastes_partitus
ENSORLG00000018127	rnaseh1	95	55.431	ENSSSCG00000025305	RNASEH1	90	54.580	Sus_scrofa
ENSORLG00000018127	rnaseh1	95	55.036	ENSTGUG00000012980	RNASEH1	93	55.556	Taeniopygia_guttata
ENSORLG00000018127	rnaseh1	97	74.725	ENSTRUG00000015774	rnaseh1	97	74.725	Takifugu_rubripes
ENSORLG00000018127	rnaseh1	99	76.173	ENSTNIG00000010715	rnaseh1	100	75.451	Tetraodon_nigroviridis
ENSORLG00000018127	rnaseh1	95	52.963	ENSTTRG00000001615	RNASEH1	90	52.963	Tursiops_truncatus
ENSORLG00000018127	rnaseh1	54	65.772	ENSUAMG00000018254	RNASEH1	77	65.772	Ursus_americanus
ENSORLG00000018127	rnaseh1	73	53.431	ENSUMAG00000003941	RNASEH1	65	51.905	Ursus_maritimus
ENSORLG00000018127	rnaseh1	95	49.071	ENSVPAG00000011589	RNASEH1	90	49.071	Vicugna_pacos
ENSORLG00000018127	rnaseh1	94	56.274	ENSVVUG00000008633	RNASEH1	80	56.274	Vulpes_vulpes
ENSORLG00000018127	rnaseh1	95	54.380	ENSXETG00000001212	rnaseh1	91	54.380	Xenopus_tropicalis
ENSORLG00000018127	rnaseh1	94	40.927	ENSXETG00000030371	-	99	39.768	Xenopus_tropicalis
ENSORLG00000018127	rnaseh1	97	73.162	ENSXMAG00000002357	rnaseh1	92	73.162	Xiphophorus_maculatus