EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000018414 (Gene tree)
Gene ID: 101160467
Gene Symbol: si:ch1073-335m2.2
Alias: -
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 21449 bases
Position: chr5:1750602-1772050
Accession: 101160467
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000023046	RRM_5	PF13893.6	1.9e-08	1	2
ENSORLP00000023046	RRM_5	PF13893.6	1.9e-08	2	2
ENSORLP00000023046	RRM_1	PF00076.22	2.4e-43	1	3
ENSORLP00000023046	RRM_1	PF00076.22	2.4e-43	2	3
ENSORLP00000023046	RRM_1	PF00076.22	2.4e-43	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000023047	-	9747	XM_004086141	ENSORLP00000023046	3173 (aa)	XP_004086189	H2MW31

Gene Model

Click here to download ENSORLG00000018414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000018414's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000018414	si:ch1073-335m2.2	77	68.037	ENSG00000065526	SPEN	85	85.259	Homo_sapiens
ENSORLG00000018414	si:ch1073-335m2.2	99	78.919	ENSAPOG00000009853	-	96	78.075	Acanthochromis_polyacanthus
ENSORLG00000018414	si:ch1073-335m2.2	100	73.807	ENSAPOG00000011411	si:ch1073-335m2.2	100	73.838	Acanthochromis_polyacanthus
ENSORLG00000018414	si:ch1073-335m2.2	99	78.919	ENSAOCG00000014505	-	51	78.075	Amphiprion_ocellaris
ENSORLG00000018414	si:ch1073-335m2.2	89	71.374	ENSAOCG00000008077	si:ch1073-335m2.2	99	71.128	Amphiprion_ocellaris
ENSORLG00000018414	si:ch1073-335m2.2	100	73.206	ENSAPEG00000013515	si:ch1073-335m2.2	100	73.206	Amphiprion_percula
ENSORLG00000018414	si:ch1073-335m2.2	99	78.919	ENSAPEG00000010288	-	96	78.075	Amphiprion_percula
ENSORLG00000018414	si:ch1073-335m2.2	100	70.665	ENSATEG00000007674	si:ch1073-335m2.2	100	70.870	Anabas_testudineus
ENSORLG00000018414	si:ch1073-335m2.2	91	65.992	ENSAPLG00000012618	SPEN	92	82.456	Anas_platyrhynchos
ENSORLG00000018414	si:ch1073-335m2.2	100	69.538	ENSACLG00000021433	si:ch1073-335m2.2	100	69.757	Astatotilapia_calliptera
ENSORLG00000018414	si:ch1073-335m2.2	99	74.372	ENSACLG00000016922	-	96	64.530	Astatotilapia_calliptera
ENSORLG00000018414	si:ch1073-335m2.2	99	77.714	ENSAMXG00000012485	spen	93	77.540	Astyanax_mexicanus
ENSORLG00000018414	si:ch1073-335m2.2	88	59.140	ENSBTAG00000018729	SPEN	72	81.871	Bos_taurus
ENSORLG00000018414	si:ch1073-335m2.2	86	65.254	ENSCJAG00000008527	SPEN	68	79.412	Callithrix_jacchus
ENSORLG00000018414	si:ch1073-335m2.2	88	64.730	ENSCHIG00000025070	SPEN	54	82.456	Capra_hircus
ENSORLG00000018414	si:ch1073-335m2.2	58	81.657	ENSCAPG00000013803	SPEN	76	81.657	Cavia_aperea
ENSORLG00000018414	si:ch1073-335m2.2	51	81.657	ENSCPOG00000014036	SPEN	70	81.657	Cavia_porcellus
ENSORLG00000018414	si:ch1073-335m2.2	67	65.254	ENSCCAG00000020258	SPEN	68	81.871	Cebus_capucinus
ENSORLG00000018414	si:ch1073-335m2.2	83	81.481	ENSCATG00000015079	SPEN	51	81.871	Cercocebus_atys
ENSORLG00000018414	si:ch1073-335m2.2	81	60.990	ENSCLAG00000002018	SPEN	72	81.657	Chinchilla_lanigera
ENSORLG00000018414	si:ch1073-335m2.2	86	63.008	ENSCANG00000034547	SPEN	68	81.871	Colobus_angolensis_palliatus
ENSORLG00000018414	si:ch1073-335m2.2	86	81.765	ENSCGRG00001007725	Spen	71	81.765	Cricetulus_griseus_chok1gshd
ENSORLG00000018414	si:ch1073-335m2.2	100	69.981	ENSCVAG00000009075	si:ch1073-335m2.2	100	69.919	Cyprinodon_variegatus
ENSORLG00000018414	si:ch1073-335m2.2	100	53.061	ENSDARG00000074332	si:ch1073-335m2.2	61	57.839	Danio_rerio
ENSORLG00000018414	si:ch1073-335m2.2	95	73.333	ENSDARG00000074245	spen	100	81.481	Danio_rerio
ENSORLG00000018414	si:ch1073-335m2.2	88	56.314	ENSDNOG00000041948	SPEN	69	81.871	Dasypus_novemcinctus
ENSORLG00000018414	si:ch1073-335m2.2	87	63.636	ENSDORG00000023909	Spen	79	81.871	Dipodomys_ordii
ENSORLG00000018414	si:ch1073-335m2.2	82	80.882	ENSECAG00000008833	SPEN	51	82.456	Equus_caballus
ENSORLG00000018414	si:ch1073-335m2.2	59	83.721	ENSEEUG00000010255	SPEN	50	83.721	Erinaceus_europaeus
ENSORLG00000018414	si:ch1073-335m2.2	100	59.351	ENSELUG00000007726	si:ch1073-335m2.2	61	63.006	Esox_lucius
ENSORLG00000018414	si:ch1073-335m2.2	59	82.456	ENSFALG00000003551	SPEN	64	82.456	Ficedula_albicollis
ENSORLG00000018414	si:ch1073-335m2.2	80	81.657	ENSFDAG00000010212	SPEN	79	81.657	Fukomys_damarensis
ENSORLG00000018414	si:ch1073-335m2.2	100	68.754	ENSFHEG00000004544	si:ch1073-335m2.2	100	68.723	Fundulus_heteroclitus
ENSORLG00000018414	si:ch1073-335m2.2	100	62.313	ENSGMOG00000008156	si:ch1073-335m2.2	100	62.126	Gadus_morhua
ENSORLG00000018414	si:ch1073-335m2.2	99	82.840	ENSGAFG00000015819	-	96	66.667	Gambusia_affinis
ENSORLG00000018414	si:ch1073-335m2.2	100	70.202	ENSGAFG00000021570	si:ch1073-335m2.2	100	70.016	Gambusia_affinis
ENSORLG00000018414	si:ch1073-335m2.2	100	67.294	ENSGACG00000001176	si:ch1073-335m2.2	100	67.665	Gasterosteus_aculeatus
ENSORLG00000018414	si:ch1073-335m2.2	99	78.919	ENSGACG00000005341	-	51	78.075	Gasterosteus_aculeatus
ENSORLG00000018414	si:ch1073-335m2.2	100	69.779	ENSHBUG00000023253	si:ch1073-335m2.2	100	69.966	Haplochromis_burtoni
ENSORLG00000018414	si:ch1073-335m2.2	99	74.874	ENSHBUG00000020626	-	95	74.874	Haplochromis_burtoni
ENSORLG00000018414	si:ch1073-335m2.2	97	65.269	ENSHCOG00000006004	si:ch1073-335m2.2	99	65.277	Hippocampus_comes
ENSORLG00000018414	si:ch1073-335m2.2	93	56.865	ENSIPUG00000018212	si:ch1073-335m2.2	99	56.502	Ictalurus_punctatus
ENSORLG00000018414	si:ch1073-335m2.2	100	67.797	ENSKMAG00000003882	-	90	67.797	Kryptolebias_marmoratus
ENSORLG00000018414	si:ch1073-335m2.2	100	71.755	ENSKMAG00000021725	si:ch1073-335m2.2	100	71.534	Kryptolebias_marmoratus
ENSORLG00000018414	si:ch1073-335m2.2	83	81.065	ENSLBEG00000019129	-	79	81.065	Labrus_bergylta
ENSORLG00000018414	si:ch1073-335m2.2	100	69.453	ENSLBEG00000020855	si:ch1073-335m2.2	100	69.390	Labrus_bergylta
ENSORLG00000018414	si:ch1073-335m2.2	87	83.041	ENSLACG00000003258	SPEN	59	83.041	Latimeria_chalumnae
ENSORLG00000018414	si:ch1073-335m2.2	98	65.812	ENSLOCG00000007896	si:ch1073-335m2.2	88	81.395	Lepisosteus_oculatus
ENSORLG00000018414	si:ch1073-335m2.2	86	64.730	ENSLAFG00000004524	SPEN	77	82.249	Loxodonta_africana
ENSORLG00000018414	si:ch1073-335m2.2	100	71.324	ENSMAMG00000023870	si:ch1073-335m2.2	100	71.354	Mastacembelus_armatus
ENSORLG00000018414	si:ch1073-335m2.2	100	69.548	ENSMZEG00005011762	si:ch1073-335m2.2	100	69.797	Maylandia_zebra
ENSORLG00000018414	si:ch1073-335m2.2	89	74.372	ENSMZEG00005021491	-	95	64.530	Maylandia_zebra
ENSORLG00000018414	si:ch1073-335m2.2	93	81.871	ENSMAUG00000008318	Spen	81	81.871	Mesocricetus_auratus
ENSORLG00000018414	si:ch1073-335m2.2	86	81.871	ENSMICG00000030994	SPEN	70	81.871	Microcebus_murinus
ENSORLG00000018414	si:ch1073-335m2.2	89	66.102	ENSMOCG00000016083	Spen	82	81.871	Microtus_ochrogaster
ENSORLG00000018414	si:ch1073-335m2.2	100	68.632	ENSMMOG00000021742	si:ch1073-335m2.2	100	68.500	Mola_mola
ENSORLG00000018414	si:ch1073-335m2.2	99	78.378	ENSMALG00000008625	-	100	54.103	Monopterus_albus
ENSORLG00000018414	si:ch1073-335m2.2	78	63.095	MGP_CAROLIEiJ_G0026745	Spen	82	81.871	Mus_caroli
ENSORLG00000018414	si:ch1073-335m2.2	78	62.698	ENSMUSG00000040761	Spen	82	76.190	Mus_musculus
ENSORLG00000018414	si:ch1073-335m2.2	75	81.871	MGP_PahariEiJ_G0029076	Spen	80	81.871	Mus_pahari
ENSORLG00000018414	si:ch1073-335m2.2	78	63.241	MGP_SPRETEiJ_G0027724	Spen	82	78.333	Mus_spretus
ENSORLG00000018414	si:ch1073-335m2.2	82	80.208	ENSMLUG00000010144	SPEN	99	66.544	Myotis_lucifugus
ENSORLG00000018414	si:ch1073-335m2.2	98	65.678	ENSNGAG00000000641	Spen	84	81.287	Nannospalax_galili
ENSORLG00000018414	si:ch1073-335m2.2	100	68.914	ENSNBRG00000005733	si:ch1073-335m2.2	100	69.103	Neolamprologus_brichardi
ENSORLG00000018414	si:ch1073-335m2.2	88	56.997	ENSNLEG00000007652	SPEN	77	81.287	Nomascus_leucogenys
ENSORLG00000018414	si:ch1073-335m2.2	67	77.895	ENSMEUG00000002422	SPEN	65	77.895	Notamacropus_eugenii
ENSORLG00000018414	si:ch1073-335m2.2	59	64.050	ENSOPRG00000015800	SPEN	67	81.871	Ochotona_princeps
ENSORLG00000018414	si:ch1073-335m2.2	100	74.874	ENSONIG00000006573	-	99	71.920	Oreochromis_niloticus
ENSORLG00000018414	si:ch1073-335m2.2	100	98.645	ENSORLG00020009351	si:ch1073-335m2.2	100	98.645	Oryzias_latipes_hni
ENSORLG00000018414	si:ch1073-335m2.2	79	82.249	ENSORLG00020007735	-	89	82.249	Oryzias_latipes_hni
ENSORLG00000018414	si:ch1073-335m2.2	100	98.361	ENSORLG00015005537	si:ch1073-335m2.2	100	98.361	Oryzias_latipes_hsok
ENSORLG00000018414	si:ch1073-335m2.2	100	90.502	ENSOMEG00000004509	si:ch1073-335m2.2	100	90.564	Oryzias_melastigma
ENSORLG00000018414	si:ch1073-335m2.2	84	81.871	ENSOGAG00000025110	SPEN	68	81.871	Otolemur_garnettii
ENSORLG00000018414	si:ch1073-335m2.2	86	64.583	ENSPANG00000006293	SPEN	69	81.871	Papio_anubis
ENSORLG00000018414	si:ch1073-335m2.2	97	92.857	ENSPKIG00000010492	si:ch1073-335m2.2	97	92.857	Paramormyrops_kingsleyae
ENSORLG00000018414	si:ch1073-335m2.2	100	76.382	ENSPKIG00000002617	SPEN	91	68.561	Paramormyrops_kingsleyae
ENSORLG00000018414	si:ch1073-335m2.2	84	81.871	ENSPEMG00000022997	Spen	82	81.871	Peromyscus_maniculatus_bairdii
ENSORLG00000018414	si:ch1073-335m2.2	100	69.824	ENSPFOG00000017986	si:ch1073-335m2.2	100	69.811	Poecilia_formosa
ENSORLG00000018414	si:ch1073-335m2.2	100	70.260	ENSPLAG00000016625	si:ch1073-335m2.2	100	70.105	Poecilia_latipinna
ENSORLG00000018414	si:ch1073-335m2.2	100	70.071	ENSPMEG00000002674	si:ch1073-335m2.2	100	70.059	Poecilia_mexicana
ENSORLG00000018414	si:ch1073-335m2.2	100	70.275	ENSPREG00000005357	si:ch1073-335m2.2	100	70.319	Poecilia_reticulata
ENSORLG00000018414	si:ch1073-335m2.2	81	56.610	ENSPCAG00000009543	SPEN	69	80.702	Procavia_capensis
ENSORLG00000018414	si:ch1073-335m2.2	62	80.117	ENSPVAG00000013794	SPEN	53	80.117	Pteropus_vampyrus
ENSORLG00000018414	si:ch1073-335m2.2	100	69.569	ENSPNYG00000009042	si:ch1073-335m2.2	100	69.788	Pundamilia_nyererei
ENSORLG00000018414	si:ch1073-335m2.2	99	74.874	ENSPNYG00000012379	-	95	74.874	Pundamilia_nyererei
ENSORLG00000018414	si:ch1073-335m2.2	99	78.613	ENSPNAG00000020795	spen	88	74.227	Pygocentrus_nattereri
ENSORLG00000018414	si:ch1073-335m2.2	100	55.582	ENSPNAG00000011452	si:ch1073-335m2.2	100	55.516	Pygocentrus_nattereri
ENSORLG00000018414	si:ch1073-335m2.2	68	64.082	ENSRNOG00000033556	Spen	55	81.871	Rattus_norvegicus
ENSORLG00000018414	si:ch1073-335m2.2	99	85.380	ENSSFOG00015010267	si:ch1073-335m2.2	98	78.238	Scleropages_formosus
ENSORLG00000018414	si:ch1073-335m2.2	100	71.047	ENSSMAG00000000125	si:ch1073-335m2.2	100	71.200	Scophthalmus_maximus
ENSORLG00000018414	si:ch1073-335m2.2	99	79.459	ENSSMAG00000008996	-	96	78.610	Scophthalmus_maximus
ENSORLG00000018414	si:ch1073-335m2.2	100	73.168	ENSSDUG00000008416	si:ch1073-335m2.2	100	73.191	Seriola_dumerili
ENSORLG00000018414	si:ch1073-335m2.2	99	79.459	ENSSLDG00000012950	-	91	65.909	Seriola_lalandi_dorsalis
ENSORLG00000018414	si:ch1073-335m2.2	100	65.957	ENSSPAG00000006014	-	98	65.957	Stegastes_partitus
ENSORLG00000018414	si:ch1073-335m2.2	100	74.654	ENSSPAG00000012454	si:ch1073-335m2.2	100	74.685	Stegastes_partitus
ENSORLG00000018414	si:ch1073-335m2.2	80	48.285	ENSTRUG00000024350	-	52	65.969	Takifugu_rubripes
ENSORLG00000018414	si:ch1073-335m2.2	87	64.177	ENSTRUG00000021008	si:ch1073-335m2.2	100	63.968	Takifugu_rubripes
ENSORLG00000018414	si:ch1073-335m2.2	100	66.839	ENSTNIG00000014666	si:ch1073-335m2.2	100	66.697	Tetraodon_nigroviridis
ENSORLG00000018414	si:ch1073-335m2.2	65	81.871	ENSTBEG00000003628	SPEN	54	81.871	Tupaia_belangeri
ENSORLG00000018414	si:ch1073-335m2.2	77	92.857	ENSVVUG00000028951	SPEN	52	92.857	Vulpes_vulpes
ENSORLG00000018414	si:ch1073-335m2.2	100	66.852	ENSXCOG00000004516	si:ch1073-335m2.2	100	66.935	Xiphophorus_couchianus
ENSORLG00000018414	si:ch1073-335m2.2	99	78.771	ENSXMAG00000021384	-	96	66.245	Xiphophorus_maculatus
ENSORLG00000018414	si:ch1073-335m2.2	100	69.994	ENSXMAG00000029887	si:ch1073-335m2.2	100	70.074	Xiphophorus_maculatus