EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000018706 (Gene tree)
Gene ID: 101168101
Gene Symbol: gpatch1
Alias: -
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 9316 bases
Position: chr3:37902931-37912246
Accession: 101168101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000023376	DUF1604	PF07713.13	1.6e-36	1	1
ENSORLP00000035255	DUF1604	PF07713.13	1.6e-36	1	1
ENSORLP00000023376	G-patch	PF01585.23	1.2e-06	1	1
ENSORLP00000035255	G-patch	PF01585.23	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000023377	-	3109	XM_004086089	ENSORLP00000023376	934 (aa)	XP_004086137	H2MWV6
ENSORLT00000042506	-	3190	-	ENSORLP00000035255	961 (aa)	-	UPI0005CC5BAA

Gene Model

Click here to download ENSORLG00000018706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000018706's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000018706	gpatch1	88	49.941	ENSG00000076650	GPATCH1	75	75.000	Homo_sapiens
ENSORLG00000018706	gpatch1	88	50.693	ENSAMEG00000015575	GPATCH1	89	50.645	Ailuropoda_melanoleuca
ENSORLG00000018706	gpatch1	84	84.615	ENSAOCG00000006668	gpatch1	80	84.615	Amphiprion_ocellaris
ENSORLG00000018706	gpatch1	99	65.159	ENSAPEG00000000026	gpatch1	97	66.882	Amphiprion_percula
ENSORLG00000018706	gpatch1	90	69.196	ENSATEG00000014494	gpatch1	92	70.136	Anabas_testudineus
ENSORLG00000018706	gpatch1	89	45.595	ENSAPLG00000007584	GPATCH1	96	46.336	Anas_platyrhynchos
ENSORLG00000018706	gpatch1	88	50.058	ENSANAG00000027002	GPATCH1	90	49.941	Aotus_nancymaae
ENSORLG00000018706	gpatch1	84	73.594	ENSACLG00000024740	gpatch1	92	73.188	Astatotilapia_calliptera
ENSORLG00000018706	gpatch1	89	56.436	ENSAMXG00000020177	gpatch1	98	56.277	Astyanax_mexicanus
ENSORLG00000018706	gpatch1	88	51.392	ENSBTAG00000000721	GPATCH1	90	51.415	Bos_taurus
ENSORLG00000018706	gpatch1	88	50.646	ENSCJAG00000000684	GPATCH1	90	50.533	Callithrix_jacchus
ENSORLG00000018706	gpatch1	88	51.351	ENSCAFG00000007457	GPATCH1	75	51.459	Canis_familiaris
ENSORLG00000018706	gpatch1	88	51.351	ENSCAFG00020019731	GPATCH1	90	51.459	Canis_lupus_dingo
ENSORLG00000018706	gpatch1	88	51.039	ENSCHIG00000019626	GPATCH1	92	51.364	Capra_hircus
ENSORLG00000018706	gpatch1	77	50.268	ENSCAPG00000008827	GPATCH1	89	48.422	Cavia_aperea
ENSORLG00000018706	gpatch1	87	50.952	ENSCPOG00000024477	GPATCH1	89	50.831	Cavia_porcellus
ENSORLG00000018706	gpatch1	88	50.059	ENSCCAG00000024676	GPATCH1	90	50.059	Cebus_capucinus
ENSORLG00000018706	gpatch1	88	50.412	ENSCATG00000043637	GPATCH1	75	73.958	Cercocebus_atys
ENSORLG00000018706	gpatch1	90	49.709	ENSCLAG00000003395	-	90	50.608	Chinchilla_lanigera
ENSORLG00000018706	gpatch1	88	48.944	ENSCSAG00000004743	GPATCH1	90	48.944	Chlorocebus_sabaeus
ENSORLG00000018706	gpatch1	81	41.985	ENSCHOG00000012865	GPATCH1	89	43.257	Choloepus_hoffmanni
ENSORLG00000018706	gpatch1	77	53.100	ENSCPBG00000000666	GPATCH1	92	52.503	Chrysemys_picta_bellii
ENSORLG00000018706	gpatch1	88	33.527	ENSCING00000012518	-	95	33.644	Ciona_intestinalis
ENSORLG00000018706	gpatch1	78	50.159	ENSCANG00000012540	GPATCH1	88	50.159	Colobus_angolensis_palliatus
ENSORLG00000018706	gpatch1	85	51.578	ENSCGRG00001016736	Gpatch1	89	51.578	Cricetulus_griseus_chok1gshd
ENSORLG00000018706	gpatch1	83	45.612	ENSCGRG00000005069	Gpatch1	77	45.248	Cricetulus_griseus_crigri
ENSORLG00000018706	gpatch1	80	62.309	ENSCSEG00000019456	-	75	85.567	Cynoglossus_semilaevis
ENSORLG00000018706	gpatch1	80	58.882	ENSDARG00000033418	gpatch1	81	60.176	Danio_rerio
ENSORLG00000018706	gpatch1	87	51.071	ENSDNOG00000005291	GPATCH1	93	51.071	Dasypus_novemcinctus
ENSORLG00000018706	gpatch1	87	48.391	ENSDORG00000012546	Gpatch1	92	48.391	Dipodomys_ordii
ENSORLG00000018706	gpatch1	88	48.353	ENSETEG00000003626	GPATCH1	91	48.353	Echinops_telfairi
ENSORLG00000018706	gpatch1	94	38.503	ENSEBUG00000011286	gpatch1	83	40.000	Eptatretus_burgeri
ENSORLG00000018706	gpatch1	88	51.124	ENSEASG00005021162	GPATCH1	91	51.013	Equus_asinus_asinus
ENSORLG00000018706	gpatch1	88	51.348	ENSECAG00000022743	GPATCH1	87	51.240	Equus_caballus
ENSORLG00000018706	gpatch1	72	52.451	ENSEEUG00000012925	GPATCH1	72	52.500	Erinaceus_europaeus
ENSORLG00000018706	gpatch1	99	55.488	ENSELUG00000018195	gpatch1	89	59.132	Esox_lucius
ENSORLG00000018706	gpatch1	88	49.824	ENSFCAG00000014917	GPATCH1	99	47.152	Felis_catus
ENSORLG00000018706	gpatch1	90	48.819	ENSFALG00000007821	GPATCH1	89	48.780	Ficedula_albicollis
ENSORLG00000018706	gpatch1	85	49.939	ENSFDAG00000003871	GPATCH1	90	50.792	Fukomys_damarensis
ENSORLG00000018706	gpatch1	89	51.138	ENSGMOG00000003830	gpatch1	96	51.605	Gadus_morhua
ENSORLG00000018706	gpatch1	91	46.903	ENSGALG00000004839	GPATCH1	92	49.070	Gallus_gallus
ENSORLG00000018706	gpatch1	88	64.561	ENSGACG00000017544	gpatch1	93	64.830	Gasterosteus_aculeatus
ENSORLG00000018706	gpatch1	87	50.708	ENSGAGG00000010067	GPATCH1	89	50.413	Gopherus_agassizii
ENSORLG00000018706	gpatch1	85	50.061	ENSGGOG00000010862	GPATCH1	89	50.061	Gorilla_gorilla
ENSORLG00000018706	gpatch1	90	70.416	ENSHBUG00000023462	gpatch1	92	70.767	Haplochromis_burtoni
ENSORLG00000018706	gpatch1	87	50.475	ENSHGLG00000009334	GPATCH1	89	50.357	Heterocephalus_glaber_female
ENSORLG00000018706	gpatch1	87	50.356	ENSHGLG00100018074	GPATCH1	89	50.238	Heterocephalus_glaber_male
ENSORLG00000018706	gpatch1	93	56.583	ENSIPUG00000014977	gpatch1	90	58.050	Ictalurus_punctatus
ENSORLG00000018706	gpatch1	88	49.706	ENSSTOG00000003720	GPATCH1	89	49.706	Ictidomys_tridecemlineatus
ENSORLG00000018706	gpatch1	88	50.234	ENSJJAG00000023765	Gpatch1	90	50.351	Jaculus_jaculus
ENSORLG00000018706	gpatch1	99	65.524	ENSKMAG00000017950	gpatch1	92	69.346	Kryptolebias_marmoratus
ENSORLG00000018706	gpatch1	91	67.588	ENSLBEG00000026527	gpatch1	90	68.268	Labrus_bergylta
ENSORLG00000018706	gpatch1	86	51.909	ENSLACG00000008130	GPATCH1	90	51.896	Latimeria_chalumnae
ENSORLG00000018706	gpatch1	97	52.210	ENSLOCG00000001800	gpatch1	91	55.923	Lepisosteus_oculatus
ENSORLG00000018706	gpatch1	88	51.106	ENSLAFG00000013589	GPATCH1	89	50.764	Loxodonta_africana
ENSORLG00000018706	gpatch1	88	50.294	ENSMFAG00000034418	GPATCH1	75	73.958	Macaca_fascicularis
ENSORLG00000018706	gpatch1	88	50.235	ENSMMUG00000011790	GPATCH1	75	75.000	Macaca_mulatta
ENSORLG00000018706	gpatch1	88	49.941	ENSMNEG00000045084	GPATCH1	75	71.875	Macaca_nemestrina
ENSORLG00000018706	gpatch1	88	42.992	ENSMLEG00000043840	GPATCH1	88	43.345	Mandrillus_leucophaeus
ENSORLG00000018706	gpatch1	84	72.861	ENSMZEG00005001926	gpatch1	92	72.397	Maylandia_zebra
ENSORLG00000018706	gpatch1	89	47.701	ENSMGAG00000005775	GPATCH1	91	48.331	Meleagris_gallopavo
ENSORLG00000018706	gpatch1	87	43.757	ENSMICG00000004829	GPATCH1	82	45.312	Microcebus_murinus
ENSORLG00000018706	gpatch1	88	50.524	ENSMOCG00000000174	Gpatch1	90	50.760	Microtus_ochrogaster
ENSORLG00000018706	gpatch1	84	67.030	ENSMMOG00000002140	gpatch1	92	65.950	Mola_mola
ENSORLG00000018706	gpatch1	88	49.824	ENSMODG00000012226	GPATCH1	89	49.299	Monodelphis_domestica
ENSORLG00000018706	gpatch1	99	64.536	ENSMALG00000014386	gpatch1	92	67.882	Monopterus_albus
ENSORLG00000018706	gpatch1	92	50.113	ENSMUSG00000063808	Gpatch1	98	71.875	Mus_musculus
ENSORLG00000018706	gpatch1	92	50.281	MGP_PahariEiJ_G0012816	Gpatch1	98	72.917	Mus_pahari
ENSORLG00000018706	gpatch1	92	49.608	MGP_SPRETEiJ_G0030681	Gpatch1	98	72.917	Mus_spretus
ENSORLG00000018706	gpatch1	88	50.822	ENSMPUG00000007658	GPATCH1	89	51.122	Mustela_putorius_furo
ENSORLG00000018706	gpatch1	88	50.526	ENSMLUG00000012161	GPATCH1	90	50.760	Myotis_lucifugus
ENSORLG00000018706	gpatch1	88	51.004	ENSNGAG00000012455	Gpatch1	90	50.885	Nannospalax_galili
ENSORLG00000018706	gpatch1	88	50.881	ENSNLEG00000007659	GPATCH1	75	75.000	Nomascus_leucogenys
ENSORLG00000018706	gpatch1	75	45.139	ENSMEUG00000015174	GPATCH1	76	44.828	Notamacropus_eugenii
ENSORLG00000018706	gpatch1	87	50.890	ENSODEG00000007103	GPATCH1	89	50.534	Octodon_degus
ENSORLG00000018706	gpatch1	89	71.395	ENSONIG00000003302	gpatch1	93	71.088	Oreochromis_niloticus
ENSORLG00000018706	gpatch1	99	47.753	ENSOANG00000012732	GPATCH1	89	50.410	Ornithorhynchus_anatinus
ENSORLG00000018706	gpatch1	88	51.166	ENSOCUG00000015905	GPATCH1	90	51.222	Oryctolagus_cuniculus
ENSORLG00000018706	gpatch1	100	81.562	ENSOMEG00000022688	gpatch1	100	83.854	Oryzias_melastigma
ENSORLG00000018706	gpatch1	82	51.965	ENSOGAG00000004016	GPATCH1	96	51.480	Otolemur_garnettii
ENSORLG00000018706	gpatch1	88	51.519	ENSOARG00000004365	GPATCH1	89	51.483	Ovis_aries
ENSORLG00000018706	gpatch1	88	50.411	ENSPPAG00000020990	GPATCH1	75	74.227	Pan_paniscus
ENSORLG00000018706	gpatch1	88	49.707	ENSPPRG00000017245	GPATCH1	99	47.046	Panthera_pardus
ENSORLG00000018706	gpatch1	88	50.293	ENSPTIG00000019649	GPATCH1	99	47.574	Panthera_tigris_altaica
ENSORLG00000018706	gpatch1	88	50.411	ENSPTRG00000010803	GPATCH1	75	75.000	Pan_troglodytes
ENSORLG00000018706	gpatch1	88	50.294	ENSPANG00000012374	GPATCH1	75	73.958	Papio_anubis
ENSORLG00000018706	gpatch1	79	60.719	ENSPKIG00000020745	gpatch1	77	60.897	Paramormyrops_kingsleyae
ENSORLG00000018706	gpatch1	88	49.942	ENSPSIG00000013433	GPATCH1	81	51.488	Pelodiscus_sinensis
ENSORLG00000018706	gpatch1	88	51.688	ENSPEMG00000000636	Gpatch1	90	51.529	Peromyscus_maniculatus_bairdii
ENSORLG00000018706	gpatch1	88	49.765	ENSPCIG00000021003	GPATCH1	94	49.592	Phascolarctos_cinereus
ENSORLG00000018706	gpatch1	89	57.110	ENSPREG00000008264	gpatch1	97	56.826	Poecilia_reticulata
ENSORLG00000018706	gpatch1	88	48.884	ENSPPYG00000009824	GPATCH1	89	48.884	Pongo_abelii
ENSORLG00000018706	gpatch1	72	49.296	ENSPCAG00000005931	GPATCH1	75	49.153	Procavia_capensis
ENSORLG00000018706	gpatch1	87	49.881	ENSPCOG00000009674	GPATCH1	94	49.761	Propithecus_coquereli
ENSORLG00000018706	gpatch1	75	50.485	ENSPVAG00000017767	GPATCH1	76	50.139	Pteropus_vampyrus
ENSORLG00000018706	gpatch1	84	73.645	ENSPNYG00000018189	gpatch1	95	72.927	Pundamilia_nyererei
ENSORLG00000018706	gpatch1	89	56.715	ENSPNAG00000013187	gpatch1	91	56.285	Pygocentrus_nattereri
ENSORLG00000018706	gpatch1	92	50.507	ENSRNOG00000011584	Gpatch1	89	51.708	Rattus_norvegicus
ENSORLG00000018706	gpatch1	88	44.287	ENSRBIG00000034723	GPATCH1	91	44.128	Rhinopithecus_bieti
ENSORLG00000018706	gpatch1	88	49.706	ENSRROG00000024428	GPATCH1	75	72.917	Rhinopithecus_roxellana
ENSORLG00000018706	gpatch1	88	50.873	ENSSBOG00000034650	GPATCH1	90	50.296	Saimiri_boliviensis_boliviensis
ENSORLG00000018706	gpatch1	88	49.590	ENSSHAG00000016016	GPATCH1	90	48.772	Sarcophilus_harrisii
ENSORLG00000018706	gpatch1	89	59.170	ENSSFOG00015011535	gpatch1	89	59.677	Scleropages_formosus
ENSORLG00000018706	gpatch1	99	61.171	ENSSMAG00000002883	gpatch1	95	63.850	Scophthalmus_maximus
ENSORLG00000018706	gpatch1	91	67.956	ENSSDUG00000007444	gpatch1	91	68.950	Seriola_dumerili
ENSORLG00000018706	gpatch1	80	73.155	ENSSLDG00000002856	gpatch1	94	71.446	Seriola_lalandi_dorsalis
ENSORLG00000018706	gpatch1	72	54.438	ENSSARG00000004108	GPATCH1	72	54.438	Sorex_araneus
ENSORLG00000018706	gpatch1	88	51.358	ENSSSCG00000002865	GPATCH1	92	51.358	Sus_scrofa
ENSORLG00000018706	gpatch1	87	50.533	ENSTGUG00000009401	GPATCH1	90	49.523	Taeniopygia_guttata
ENSORLG00000018706	gpatch1	88	68.258	ENSTRUG00000025081	gpatch1	91	67.168	Takifugu_rubripes
ENSORLG00000018706	gpatch1	88	68.138	ENSTRUG00000005785	-	91	67.052	Takifugu_rubripes
ENSORLG00000018706	gpatch1	80	67.575	ENSTNIG00000002554	gpatch1	97	68.093	Tetraodon_nigroviridis
ENSORLG00000018706	gpatch1	61	52.273	ENSTBEG00000007750	-	80	52.326	Tupaia_belangeri
ENSORLG00000018706	gpatch1	88	45.116	ENSTTRG00000012221	GPATCH1	90	45.581	Tursiops_truncatus
ENSORLG00000018706	gpatch1	88	50.645	ENSUMAG00000014645	GPATCH1	77	72.917	Ursus_maritimus
ENSORLG00000018706	gpatch1	77	63.006	ENSVPAG00000010313	GPATCH1	84	62.431	Vicugna_pacos
ENSORLG00000018706	gpatch1	88	51.472	ENSVVUG00000016572	GPATCH1	90	51.579	Vulpes_vulpes
ENSORLG00000018706	gpatch1	88	44.836	ENSXETG00000018276	gpatch1	95	46.335	Xenopus_tropicalis