EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000018748 (Gene tree)
Gene ID: -
Gene Symbol: dkc1
Alias: -
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 8011 bases
Position: chr22:45332-53342
Accession: 101159315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000023417	TruB_N	PF01509.18	7.6e-22	1	1
ENSORLP00000023417	PUA	PF01472.20	8.4e-16	1	1
ENSORLP00000023417	DKCLD	PF08068.12	4.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000023418	-	1524	XM_004084715	ENSORLP00000023417	507 (aa)	XP_004084763	H2MWY9

Gene Model

Click here to download ENSORLG00000018748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000018748's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000018748	dkc1	89	78.097	ENSG00000130826	DKC1	99	86.893	Homo_sapiens
ENSORLG00000018748	dkc1	83	88.915	ENSAPOG00000007799	dkc1	91	86.638	Acanthochromis_polyacanthus
ENSORLG00000018748	dkc1	87	79.545	ENSAMEG00000002776	DKC1	77	86.445	Ailuropoda_melanoleuca
ENSORLG00000018748	dkc1	84	88.679	ENSACIG00000022614	dkc1	91	87.583	Amphilophus_citrinellus
ENSORLG00000018748	dkc1	83	90.476	ENSAOCG00000013159	dkc1	91	89.310	Amphiprion_ocellaris
ENSORLG00000018748	dkc1	83	90.238	ENSAPEG00000002284	dkc1	91	89.087	Amphiprion_percula
ENSORLG00000018748	dkc1	85	85.488	ENSATEG00000013682	dkc1	91	84.368	Anabas_testudineus
ENSORLG00000018748	dkc1	91	77.801	ENSACAG00000015600	DKC1	82	77.684	Anolis_carolinensis
ENSORLG00000018748	dkc1	89	78.097	ENSANAG00000022732	DKC1	91	77.039	Aotus_nancymaae
ENSORLG00000018748	dkc1	90	83.478	ENSACLG00000015605	dkc1	80	92.621	Astatotilapia_calliptera
ENSORLG00000018748	dkc1	84	87.383	ENSAMXG00000017108	dkc1	84	88.000	Astyanax_mexicanus
ENSORLG00000018748	dkc1	89	76.821	ENSBTAG00000013045	DKC1	86	80.139	Bos_taurus
ENSORLG00000018748	dkc1	92	57.692	WBGene00010478	K01G5.5	96	59.071	Caenorhabditis_elegans
ENSORLG00000018748	dkc1	84	79.452	ENSCJAG00000004210	DKC1	84	80.184	Callithrix_jacchus
ENSORLG00000018748	dkc1	78	76.203	ENSCAFG00000009311	-	77	76.982	Canis_familiaris
ENSORLG00000018748	dkc1	89	76.821	ENSCAFG00000019620	-	76	85.934	Canis_familiaris
ENSORLG00000018748	dkc1	89	76.821	ENSCAFG00020008918	-	76	85.934	Canis_lupus_dingo
ENSORLG00000018748	dkc1	78	75.190	ENSCAFG00020009379	-	74	75.959	Canis_lupus_dingo
ENSORLG00000018748	dkc1	89	77.042	ENSCHIG00000017392	DKC1	86	79.770	Capra_hircus
ENSORLG00000018748	dkc1	91	76.407	ENSTSYG00000007681	DKC1	86	76.840	Carlito_syrichta
ENSORLG00000018748	dkc1	72	87.432	ENSCAPG00000003342	DKC1	84	87.193	Cavia_aperea
ENSORLG00000018748	dkc1	84	79.954	ENSCPOG00000008825	DKC1	85	80.690	Cavia_porcellus
ENSORLG00000018748	dkc1	84	70.023	ENSCCAG00000027418	DKC1	83	70.670	Cebus_capucinus
ENSORLG00000018748	dkc1	85	78.652	ENSCATG00000033602	DKC1	91	76.395	Cercocebus_atys
ENSORLG00000018748	dkc1	83	81.439	ENSCLAG00000000720	DKC1	84	82.201	Chinchilla_lanigera
ENSORLG00000018748	dkc1	89	77.876	ENSCSAG00000006706	DKC1	91	76.395	Chlorocebus_sabaeus
ENSORLG00000018748	dkc1	86	79.186	ENSCPBG00000005858	DKC1	84	86.957	Chrysemys_picta_bellii
ENSORLG00000018748	dkc1	77	80.662	ENSCING00000004599	-	82	75.459	Ciona_intestinalis
ENSORLG00000018748	dkc1	86	72.146	ENSCSAVG00000010047	-	95	70.953	Ciona_savignyi
ENSORLG00000018748	dkc1	89	77.876	ENSCANG00000027987	DKC1	91	76.395	Colobus_angolensis_palliatus
ENSORLG00000018748	dkc1	75	65.873	ENSCGRG00001016789	-	78	67.123	Cricetulus_griseus_chok1gshd
ENSORLG00000018748	dkc1	84	79.128	ENSCGRG00001014574	-	84	79.861	Cricetulus_griseus_chok1gshd
ENSORLG00000018748	dkc1	92	57.419	ENSCGRG00000014809	-	76	67.123	Cricetulus_griseus_crigri
ENSORLG00000018748	dkc1	84	79.128	ENSCGRG00000016075	-	84	79.861	Cricetulus_griseus_crigri
ENSORLG00000018748	dkc1	91	85.281	ENSCSEG00000012633	dkc1	94	86.667	Cynoglossus_semilaevis
ENSORLG00000018748	dkc1	85	87.935	ENSCVAG00000010155	dkc1	88	87.417	Cyprinodon_variegatus
ENSORLG00000018748	dkc1	78	91.139	ENSDARG00000016484	dkc1	83	87.354	Danio_rerio
ENSORLG00000018748	dkc1	84	80.275	ENSDNOG00000004218	DKC1	84	81.019	Dasypus_novemcinctus
ENSORLG00000018748	dkc1	54	72.263	ENSDORG00000013566	-	89	72.794	Dipodomys_ordii
ENSORLG00000018748	dkc1	83	68.794	FBgn0259937	Nop60B	86	68.718	Drosophila_melanogaster
ENSORLG00000018748	dkc1	78	84.557	ENSETEG00000016095	DKC1	79	85.422	Echinops_telfairi
ENSORLG00000018748	dkc1	65	76.900	ENSEBUG00000015962	dkc1	98	81.443	Eptatretus_burgeri
ENSORLG00000018748	dkc1	89	76.600	ENSEASG00005007484	DKC1	75	86.189	Equus_asinus_asinus
ENSORLG00000018748	dkc1	89	76.600	ENSECAG00000023524	DKC1	75	86.189	Equus_caballus
ENSORLG00000018748	dkc1	76	86.788	ENSEEUG00000003323	DKC1	91	86.788	Erinaceus_europaeus
ENSORLG00000018748	dkc1	84	87.588	ENSELUG00000014538	dkc1	84	88.000	Esox_lucius
ENSORLG00000018748	dkc1	78	85.823	ENSFCAG00000006577	DKC1	77	86.701	Felis_catus
ENSORLG00000018748	dkc1	78	85.360	ENSFALG00000011496	DKC1	84	80.182	Ficedula_albicollis
ENSORLG00000018748	dkc1	90	77.447	ENSFDAG00000002516	DKC1	92	78.112	Fukomys_damarensis
ENSORLG00000018748	dkc1	84	86.977	ENSFHEG00000004627	dkc1	90	85.651	Fundulus_heteroclitus
ENSORLG00000018748	dkc1	77	88.235	ENSGMOG00000017277	dkc1	100	88.235	Gadus_morhua
ENSORLG00000018748	dkc1	79	85.965	ENSGALG00000005054	DKC1	90	77.468	Gallus_gallus
ENSORLG00000018748	dkc1	85	87.529	ENSGAFG00000011486	dkc1	79	86.652	Gambusia_affinis
ENSORLG00000018748	dkc1	78	91.646	ENSGACG00000004373	dkc1	96	93.617	Gasterosteus_aculeatus
ENSORLG00000018748	dkc1	86	79.186	ENSGAGG00000011330	DKC1	83	81.395	Gopherus_agassizii
ENSORLG00000018748	dkc1	89	78.097	ENSGGOG00000001045	DKC1	91	76.609	Gorilla_gorilla
ENSORLG00000018748	dkc1	90	85.714	ENSHBUG00000012436	dkc1	90	86.253	Haplochromis_burtoni
ENSORLG00000018748	dkc1	79	83.871	ENSHGLG00000000649	DKC1	85	79.909	Heterocephalus_glaber_female
ENSORLG00000018748	dkc1	79	83.871	ENSHGLG00100001153	DKC1	86	79.909	Heterocephalus_glaber_male
ENSORLG00000018748	dkc1	91	82.468	ENSHCOG00000021099	dkc1	84	85.849	Hippocampus_comes
ENSORLG00000018748	dkc1	84	86.009	ENSIPUG00000010309	dkc1	91	81.953	Ictalurus_punctatus
ENSORLG00000018748	dkc1	84	72.644	ENSSTOG00000020149	-	84	73.193	Ictidomys_tridecemlineatus
ENSORLG00000018748	dkc1	88	68.161	ENSSTOG00000011904	-	71	74.169	Ictidomys_tridecemlineatus
ENSORLG00000018748	dkc1	85	78.251	ENSSTOG00000001074	-	89	79.224	Ictidomys_tridecemlineatus
ENSORLG00000018748	dkc1	54	71.739	ENSJJAG00000010086	-	90	72.794	Jaculus_jaculus
ENSORLG00000018748	dkc1	84	85.116	ENSKMAG00000008010	dkc1	92	83.983	Kryptolebias_marmoratus
ENSORLG00000018748	dkc1	84	86.417	ENSLBEG00000019122	dkc1	93	85.088	Labrus_bergylta
ENSORLG00000018748	dkc1	82	83.493	ENSLACG00000014025	DKC1	89	86.701	Latimeria_chalumnae
ENSORLG00000018748	dkc1	85	83.908	ENSLOCG00000013713	dkc1	88	85.782	Lepisosteus_oculatus
ENSORLG00000018748	dkc1	83	80.230	ENSLAFG00000000221	DKC1	84	80.600	Loxodonta_africana
ENSORLG00000018748	dkc1	89	77.876	ENSMFAG00000032398	DKC1	78	76.395	Macaca_fascicularis
ENSORLG00000018748	dkc1	89	77.876	ENSMMUG00000005768	DKC1	91	76.395	Macaca_mulatta
ENSORLG00000018748	dkc1	89	77.876	ENSMNEG00000034503	DKC1	91	76.395	Macaca_nemestrina
ENSORLG00000018748	dkc1	89	77.876	ENSMLEG00000034422	DKC1	91	76.395	Mandrillus_leucophaeus
ENSORLG00000018748	dkc1	81	91.951	ENSMAMG00000005427	dkc1	89	93.970	Mastacembelus_armatus
ENSORLG00000018748	dkc1	90	85.934	ENSMZEG00005014503	dkc1	90	86.475	Maylandia_zebra
ENSORLG00000018748	dkc1	72	88.798	ENSMGAG00000009238	DKC1	95	78.719	Meleagris_gallopavo
ENSORLG00000018748	dkc1	54	71.533	ENSMAUG00000016454	-	89	72.059	Mesocricetus_auratus
ENSORLG00000018748	dkc1	79	72.993	ENSMICG00000002818	-	99	76.438	Microcebus_murinus
ENSORLG00000018748	dkc1	84	79.263	ENSMICG00000038751	-	86	79.767	Microcebus_murinus
ENSORLG00000018748	dkc1	54	68.978	ENSMOCG00000001169	-	89	69.485	Microtus_ochrogaster
ENSORLG00000018748	dkc1	79	90.750	ENSMMOG00000020348	dkc1	86	91.667	Mola_mola
ENSORLG00000018748	dkc1	78	85.025	ENSMODG00000009243	DKC1	68	85.678	Monodelphis_domestica
ENSORLG00000018748	dkc1	84	88.056	ENSMALG00000009454	dkc1	84	88.889	Monopterus_albus
ENSORLG00000018748	dkc1	78	72.953	MGP_CAROLIEiJ_G0033191	Dkc1	82	83.471	Mus_caroli
ENSORLG00000018748	dkc1	78	85.496	ENSMUSG00000031403	Dkc1	77	85.934	Mus_musculus
ENSORLG00000018748	dkc1	83	79.080	MGP_PahariEiJ_G0031735	Dkc1	85	79.446	Mus_pahari
ENSORLG00000018748	dkc1	86	77.506	MGP_SPRETEiJ_G0034351	Dkc1	87	77.978	Mus_spretus
ENSORLG00000018748	dkc1	89	76.638	ENSMPUG00000016136	DKC1	73	85.934	Mustela_putorius_furo
ENSORLG00000018748	dkc1	78	81.266	ENSMLUG00000011918	DKC1	75	82.097	Myotis_lucifugus
ENSORLG00000018748	dkc1	54	71.377	ENSNGAG00000015724	-	90	72.426	Nannospalax_galili
ENSORLG00000018748	dkc1	78	92.443	ENSNBRG00000005638	dkc1	79	93.130	Neolamprologus_brichardi
ENSORLG00000018748	dkc1	89	77.876	ENSNLEG00000014323	DKC1	91	76.395	Nomascus_leucogenys
ENSORLG00000018748	dkc1	89	75.278	ENSMEUG00000001066	DKC1	95	74.273	Notamacropus_eugenii
ENSORLG00000018748	dkc1	68	79.420	ENSOPRG00000005248	DKC1	68	79.883	Ochotona_princeps
ENSORLG00000018748	dkc1	79	85.500	ENSODEG00000011816	-	85	81.149	Octodon_degus
ENSORLG00000018748	dkc1	54	71.377	ENSODEG00000000549	-	89	72.426	Octodon_degus
ENSORLG00000018748	dkc1	84	87.617	ENSONIG00000013889	dkc1	90	87.140	Oreochromis_niloticus
ENSORLG00000018748	dkc1	55	63.696	ENSOANG00000022295	-	84	63.696	Ornithorhynchus_anatinus
ENSORLG00000018748	dkc1	82	82.791	ENSOANG00000008713	-	88	82.791	Ornithorhynchus_anatinus
ENSORLG00000018748	dkc1	90	77.447	ENSOCUG00000012646	DKC1	90	77.778	Oryctolagus_cuniculus
ENSORLG00000018748	dkc1	91	93.290	ENSOMEG00000005786	dkc1	85	93.696	Oryzias_melastigma
ENSORLG00000018748	dkc1	90	77.560	ENSOGAG00000003399	DKC1	75	86.957	Otolemur_garnettii
ENSORLG00000018748	dkc1	89	77.483	ENSOARG00000003047	DKC1	86	80.000	Ovis_aries
ENSORLG00000018748	dkc1	78	85.570	ENSPPAG00000023820	DKC1	91	76.609	Pan_paniscus
ENSORLG00000018748	dkc1	78	85.823	ENSPPRG00000009104	DKC1	77	86.701	Panthera_pardus
ENSORLG00000018748	dkc1	83	82.339	ENSPTIG00000017469	DKC1	84	83.133	Panthera_tigris_altaica
ENSORLG00000018748	dkc1	89	78.097	ENSPTRG00000022449	DKC1	91	76.609	Pan_troglodytes
ENSORLG00000018748	dkc1	89	78.097	ENSPTRG00000043416	-	79	76.609	Pan_troglodytes
ENSORLG00000018748	dkc1	89	77.876	ENSPANG00000011978	DKC1	91	76.395	Papio_anubis
ENSORLG00000018748	dkc1	85	86.406	ENSPKIG00000008443	dkc1	90	87.383	Paramormyrops_kingsleyae
ENSORLG00000018748	dkc1	71	88.333	ENSPSIG00000013765	DKC1	86	88.827	Pelodiscus_sinensis
ENSORLG00000018748	dkc1	89	77.660	ENSPMGG00000004097	dkc1	86	77.991	Periophthalmus_magnuspinnatus
ENSORLG00000018748	dkc1	62	83.041	ENSPEMG00000013348	Dkc1	81	85.030	Peromyscus_maniculatus_bairdii
ENSORLG00000018748	dkc1	78	85.242	ENSPCIG00000016706	DKC1	81	72.485	Phascolarctos_cinereus
ENSORLG00000018748	dkc1	85	87.760	ENSPFOG00000018653	dkc1	91	86.652	Poecilia_formosa
ENSORLG00000018748	dkc1	85	87.760	ENSPLAG00000003272	dkc1	82	86.652	Poecilia_latipinna
ENSORLG00000018748	dkc1	85	87.760	ENSPMEG00000010413	dkc1	91	86.652	Poecilia_mexicana
ENSORLG00000018748	dkc1	85	88.046	ENSPREG00000004100	dkc1	90	86.928	Poecilia_reticulata
ENSORLG00000018748	dkc1	89	78.097	ENSPPYG00000020892	DKC1	92	76.609	Pongo_abelii
ENSORLG00000018748	dkc1	71	87.293	ENSPCAG00000015034	DKC1	71	87.293	Procavia_capensis
ENSORLG00000018748	dkc1	85	78.959	ENSPCOG00000026874	DKC1	91	76.395	Propithecus_coquereli
ENSORLG00000018748	dkc1	84	80.047	ENSPVAG00000009222	DKC1	91	77.753	Pteropus_vampyrus
ENSORLG00000018748	dkc1	90	84.154	ENSPNYG00000020063	dkc1	92	84.665	Pundamilia_nyererei
ENSORLG00000018748	dkc1	85	86.512	ENSPNAG00000005780	dkc1	89	85.078	Pygocentrus_nattereri
ENSORLG00000018748	dkc1	84	75.973	ENSRNOG00000055562	Dkc1	85	76.322	Rattus_norvegicus
ENSORLG00000018748	dkc1	89	77.876	ENSRBIG00000028457	DKC1	78	76.395	Rhinopithecus_bieti
ENSORLG00000018748	dkc1	89	77.876	ENSRROG00000044780	DKC1	91	76.395	Rhinopithecus_roxellana
ENSORLG00000018748	dkc1	85	64.138	YLR175W	-	98	60.593	Saccharomyces_cerevisiae
ENSORLG00000018748	dkc1	84	79.634	ENSSBOG00000033746	DKC1	84	80.370	Saimiri_boliviensis_boliviensis
ENSORLG00000018748	dkc1	89	77.384	ENSSHAG00000002463	DKC1	91	79.724	Sarcophilus_harrisii
ENSORLG00000018748	dkc1	83	85.714	ENSSFOG00015009585	dkc1	90	82.751	Scleropages_formosus
ENSORLG00000018748	dkc1	84	88.235	ENSSMAG00000002552	dkc1	90	85.403	Scophthalmus_maximus
ENSORLG00000018748	dkc1	89	86.283	ENSSDUG00000009963	dkc1	89	86.667	Seriola_dumerili
ENSORLG00000018748	dkc1	78	93.655	ENSSLDG00000019342	dkc1	82	94.133	Seriola_lalandi_dorsalis
ENSORLG00000018748	dkc1	80	79.506	ENSSARG00000001822	DKC1	79	80.299	Sorex_araneus
ENSORLG00000018748	dkc1	86	79.909	ENSSPUG00000018907	DKC1	92	74.845	Sphenodon_punctatus
ENSORLG00000018748	dkc1	83	90.047	ENSSPAG00000002585	dkc1	88	87.257	Stegastes_partitus
ENSORLG00000018748	dkc1	79	84.925	ENSSSCG00000012823	DKC1	89	80.516	Sus_scrofa
ENSORLG00000018748	dkc1	72	90.083	ENSTGUG00000006781	DKC1	88	83.251	Taeniopygia_guttata
ENSORLG00000018748	dkc1	85	85.977	ENSTRUG00000004413	dkc1	85	87.529	Takifugu_rubripes
ENSORLG00000018748	dkc1	83	70.413	ENSTNIG00000002582	dkc1	84	71.065	Tetraodon_nigroviridis
ENSORLG00000018748	dkc1	53	85.874	ENSTBEG00000011262	DKC1	88	73.156	Tupaia_belangeri
ENSORLG00000018748	dkc1	55	86.282	ENSTTRG00000008089	DKC1	55	86.282	Tursiops_truncatus
ENSORLG00000018748	dkc1	89	77.483	ENSUAMG00000022721	DKC1	82	86.445	Ursus_americanus
ENSORLG00000018748	dkc1	89	77.042	ENSUMAG00000016899	DKC1	93	87.071	Ursus_maritimus
ENSORLG00000018748	dkc1	89	75.652	ENSVVUG00000020734	-	69	84.422	Vulpes_vulpes
ENSORLG00000018748	dkc1	88	64.430	ENSVVUG00000021671	-	72	71.100	Vulpes_vulpes
ENSORLG00000018748	dkc1	86	81.279	ENSXETG00000032517	DKC1	95	75.051	Xenopus_tropicalis
ENSORLG00000018748	dkc1	85	87.760	ENSXCOG00000005498	dkc1	97	87.417	Xiphophorus_couchianus
ENSORLG00000018748	dkc1	85	87.067	ENSXMAG00000004919	dkc1	91	86.755	Xiphophorus_maculatus