EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000018862 (Gene tree)
Gene ID: 101163880
Gene Symbol: nob1
Alias: -
Full Name: NIN1 (RPN12) binding protein 1 homolog
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 2857 bases
Position: chr3:37934729-37937585
Accession: 101163880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000023547	NOB1_Zn_bind	PF08772.11	1.2e-29	1	1
ENSORLP00000023551	NOB1_Zn_bind	PF08772.11	1.5e-29	1	1
ENSORLP00000030478	NOB1_Zn_bind	PF08772.11	7.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000023552	-	1785	XM_004086072	ENSORLP00000023551	455 (aa)	XP_004086120	H2MX98
ENSORLT00000023548	-	1212	-	ENSORLP00000023547	403 (aa)	-	H2MX95
ENSORLT00000045716	-	1914	-	ENSORLP00000030478	498 (aa)	-	-

Gene Model

Click here to download ENSORLG00000018862's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000018862's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000018862	nob1	100	63.614	ENSG00000141101	NOB1	97	74.242	Homo_sapiens
ENSORLG00000018862	nob1	100	66.423	ENSAPOG00000008241	nob1	100	67.153	Acanthochromis_polyacanthus
ENSORLG00000018862	nob1	99	65.133	ENSAMEG00000006706	NOB1	98	64.165	Ailuropoda_melanoleuca
ENSORLG00000018862	nob1	99	72.447	ENSACIG00000001503	nob1	100	72.447	Amphilophus_citrinellus
ENSORLG00000018862	nob1	100	76.923	ENSAOCG00000006533	nob1	100	76.923	Amphiprion_ocellaris
ENSORLG00000018862	nob1	100	78.908	ENSAPEG00000000029	nob1	100	78.908	Amphiprion_percula
ENSORLG00000018862	nob1	100	78.908	ENSAPEG00000000032	-	100	78.908	Amphiprion_percula
ENSORLG00000018862	nob1	100	73.366	ENSATEG00000014585	nob1	100	73.399	Anabas_testudineus
ENSORLG00000018862	nob1	100	61.215	ENSACAG00000003697	NOB1	88	62.322	Anolis_carolinensis
ENSORLG00000018862	nob1	100	63.373	ENSANAG00000036611	NOB1	100	64.096	Aotus_nancymaae
ENSORLG00000018862	nob1	100	71.926	ENSACLG00000024897	nob1	100	71.694	Astatotilapia_calliptera
ENSORLG00000018862	nob1	94	62.207	ENSAMXG00000003642	nob1	100	62.441	Astyanax_mexicanus
ENSORLG00000018862	nob1	100	64.904	ENSBTAG00000020633	NOB1	100	63.942	Bos_taurus
ENSORLG00000018862	nob1	74	40.394	WBGene00021843	Y54E10BR.4	97	32.234	Caenorhabditis_elegans
ENSORLG00000018862	nob1	100	63.614	ENSCJAG00000015230	NOB1	100	64.337	Callithrix_jacchus
ENSORLG00000018862	nob1	99	63.855	ENSCAFG00000020251	NOB1	99	63.835	Canis_familiaris
ENSORLG00000018862	nob1	99	63.855	ENSCAFG00020020297	NOB1	99	63.835	Canis_lupus_dingo
ENSORLG00000018862	nob1	100	64.938	ENSCHIG00000027022	NOB1	100	64.691	Capra_hircus
ENSORLG00000018862	nob1	100	62.740	ENSTSYG00000003084	NOB1	100	62.651	Carlito_syrichta
ENSORLG00000018862	nob1	83	61.628	ENSCAPG00000015542	NOB1	100	62.500	Cavia_aperea
ENSORLG00000018862	nob1	100	64.078	ENSCPOG00000022538	NOB1	100	64.806	Cavia_porcellus
ENSORLG00000018862	nob1	100	63.397	ENSCCAG00000023773	NOB1	100	64.354	Cebus_capucinus
ENSORLG00000018862	nob1	99	63.171	ENSCATG00000039487	NOB1	99	63.902	Cercocebus_atys
ENSORLG00000018862	nob1	83	63.609	ENSCLAG00000005926	NOB1	100	63.609	Chinchilla_lanigera
ENSORLG00000018862	nob1	100	62.892	ENSCSAG00000004158	NOB1	100	63.614	Chlorocebus_sabaeus
ENSORLG00000018862	nob1	99	57.702	ENSCHOG00000011047	NOB1	99	57.457	Choloepus_hoffmanni
ENSORLG00000018862	nob1	99	62.559	ENSCPBG00000027035	NOB1	92	61.848	Chrysemys_picta_bellii
ENSORLG00000018862	nob1	99	49.628	ENSCING00000023441	-	99	49.505	Ciona_intestinalis
ENSORLG00000018862	nob1	99	46.136	ENSCSAVG00000009081	-	99	45.652	Ciona_savignyi
ENSORLG00000018862	nob1	100	65.517	ENSCGRG00001009255	Nob1	95	65.271	Cricetulus_griseus_chok1gshd
ENSORLG00000018862	nob1	100	65.517	ENSCGRG00000010869	Nob1	100	66.256	Cricetulus_griseus_crigri
ENSORLG00000018862	nob1	87	65.963	ENSCSEG00000019657	nob1	93	66.227	Cynoglossus_semilaevis
ENSORLG00000018862	nob1	99	62.921	ENSDARG00000016080	nob1	100	63.596	Danio_rerio
ENSORLG00000018862	nob1	100	64.010	ENSDNOG00000041643	NOB1	100	64.010	Dasypus_novemcinctus
ENSORLG00000018862	nob1	100	63.747	ENSDORG00000000483	Nob1	100	63.747	Dipodomys_ordii
ENSORLG00000018862	nob1	97	36.287	FBgn0030177	CG2972	98	36.617	Drosophila_melanogaster
ENSORLG00000018862	nob1	71	42.017	ENSETEG00000000011	-	58	53.782	Echinops_telfairi
ENSORLG00000018862	nob1	100	46.059	ENSEBUG00000004464	nob1	99	46.040	Eptatretus_burgeri
ENSORLG00000018862	nob1	100	63.962	ENSEASG00005021356	NOB1	84	63.484	Equus_asinus_asinus
ENSORLG00000018862	nob1	100	63.962	ENSECAG00000023748	NOB1	81	63.484	Equus_caballus
ENSORLG00000018862	nob1	79	39.295	ENSEEUG00000014384	NOB1	66	50.178	Erinaceus_europaeus
ENSORLG00000018862	nob1	100	62.838	ENSELUG00000016199	nob1	100	61.261	Esox_lucius
ENSORLG00000018862	nob1	100	64.423	ENSFCAG00000002958	NOB1	100	64.423	Felis_catus
ENSORLG00000018862	nob1	53	63.223	ENSFALG00000002747	NOB1	86	68.664	Ficedula_albicollis
ENSORLG00000018862	nob1	100	64.806	ENSFDAG00000009239	NOB1	100	64.563	Fukomys_damarensis
ENSORLG00000018862	nob1	56	79.828	ENSFHEG00000007657	nob1	53	83.575	Fundulus_heteroclitus
ENSORLG00000018862	nob1	99	72.569	ENSGMOG00000010638	nob1	99	72.319	Gadus_morhua
ENSORLG00000018862	nob1	99	57.210	ENSGALG00000000693	NOB1	99	57.447	Gallus_gallus
ENSORLG00000018862	nob1	100	68.817	ENSGAFG00000006104	nob1	100	69.083	Gambusia_affinis
ENSORLG00000018862	nob1	99	73.594	ENSGACG00000017552	nob1	99	75.862	Gasterosteus_aculeatus
ENSORLG00000018862	nob1	99	62.559	ENSGAGG00000003902	NOB1	99	61.848	Gopherus_agassizii
ENSORLG00000018862	nob1	100	63.855	ENSGGOG00000025456	NOB1	100	64.578	Gorilla_gorilla
ENSORLG00000018862	nob1	100	74.757	ENSHBUG00000002580	nob1	100	74.757	Haplochromis_burtoni
ENSORLG00000018862	nob1	100	63.309	ENSHGLG00000014260	NOB1	100	63.070	Heterocephalus_glaber_female
ENSORLG00000018862	nob1	100	63.592	ENSHGLG00100013978	NOB1	100	63.835	Heterocephalus_glaber_male
ENSORLG00000018862	nob1	99	64.846	ENSHCOG00000006699	nob1	100	64.846	Hippocampus_comes
ENSORLG00000018862	nob1	100	62.578	ENSIPUG00000007579	nob1	100	63.048	Ictalurus_punctatus
ENSORLG00000018862	nob1	100	64.216	ENSSTOG00000001204	NOB1	100	64.216	Ictidomys_tridecemlineatus
ENSORLG00000018862	nob1	99	63.391	ENSJJAG00000015543	Nob1	99	63.636	Jaculus_jaculus
ENSORLG00000018862	nob1	100	75.000	ENSKMAG00000018220	nob1	100	75.000	Kryptolebias_marmoratus
ENSORLG00000018862	nob1	100	77.228	ENSLBEG00000026375	nob1	100	77.228	Labrus_bergylta
ENSORLG00000018862	nob1	100	60.502	ENSLACG00000006973	NOB1	98	60.959	Latimeria_chalumnae
ENSORLG00000018862	nob1	100	62.284	ENSLOCG00000001411	nob1	99	61.607	Lepisosteus_oculatus
ENSORLG00000018862	nob1	100	61.962	ENSLAFG00000008978	NOB1	100	62.919	Loxodonta_africana
ENSORLG00000018862	nob1	100	63.285	ENSMFAG00000030131	NOB1	100	63.768	Macaca_fascicularis
ENSORLG00000018862	nob1	100	63.614	ENSMMUG00000006506	NOB1	100	64.096	Macaca_mulatta
ENSORLG00000018862	nob1	100	63.614	ENSMNEG00000028829	NOB1	100	59.277	Macaca_nemestrina
ENSORLG00000018862	nob1	100	63.373	ENSMLEG00000032913	NOB1	100	64.096	Mandrillus_leucophaeus
ENSORLG00000018862	nob1	100	75.245	ENSMZEG00005028346	nob1	100	75.682	Maylandia_zebra
ENSORLG00000018862	nob1	67	66.443	ENSMZEG00005003827	-	92	68.543	Maylandia_zebra
ENSORLG00000018862	nob1	62	64.906	ENSMGAG00000008675	NOB1	98	65.660	Meleagris_gallopavo
ENSORLG00000018862	nob1	100	63.636	ENSMAUG00000013554	Nob1	100	63.636	Mesocricetus_auratus
ENSORLG00000018862	nob1	100	63.876	ENSMICG00000012123	NOB1	100	64.354	Microcebus_murinus
ENSORLG00000018862	nob1	100	66.748	ENSMOCG00000010370	Nob1	100	67.237	Microtus_ochrogaster
ENSORLG00000018862	nob1	100	75.787	ENSMMOG00000002120	nob1	100	75.303	Mola_mola
ENSORLG00000018862	nob1	99	61.667	ENSMODG00000002677	NOB1	99	62.857	Monodelphis_domestica
ENSORLG00000018862	nob1	99	75.124	ENSMALG00000014580	nob1	100	75.124	Monopterus_albus
ENSORLG00000018862	nob1	100	66.015	MGP_CAROLIEiJ_G0031536	Nob1	98	66.015	Mus_caroli
ENSORLG00000018862	nob1	100	66.585	ENSMUSG00000003848	Nob1	100	66.585	Mus_musculus
ENSORLG00000018862	nob1	100	65.534	MGP_PahariEiJ_G0023136	Nob1	100	65.534	Mus_pahari
ENSORLG00000018862	nob1	100	65.777	MGP_SPRETEiJ_G0032654	Nob1	98	65.777	Mus_spretus
ENSORLG00000018862	nob1	99	64.407	ENSMPUG00000007483	NOB1	91	64.407	Mustela_putorius_furo
ENSORLG00000018862	nob1	100	63.923	ENSMLUG00000006667	NOB1	100	64.165	Myotis_lucifugus
ENSORLG00000018862	nob1	100	65.848	ENSNGAG00000008627	Nob1	100	65.848	Nannospalax_galili
ENSORLG00000018862	nob1	100	63.133	ENSNLEG00000005572	NOB1	100	63.855	Nomascus_leucogenys
ENSORLG00000018862	nob1	78	60.671	ENSOPRG00000006721	NOB1	100	61.280	Ochotona_princeps
ENSORLG00000018862	nob1	99	64.838	ENSODEG00000014376	NOB1	99	64.589	Octodon_degus
ENSORLG00000018862	nob1	99	70.588	ENSONIG00000003319	nob1	100	70.362	Oreochromis_niloticus
ENSORLG00000018862	nob1	83	64.000	ENSOCUG00000004400	NOB1	100	64.000	Oryctolagus_cuniculus
ENSORLG00000018862	nob1	100	99.121	ENSORLG00020014687	nob1	100	99.121	Oryzias_latipes_hni
ENSORLG00000018862	nob1	100	99.341	ENSORLG00015012156	nob1	100	99.341	Oryzias_latipes_hsok
ENSORLG00000018862	nob1	100	90.217	ENSOMEG00000022722	nob1	100	90.435	Oryzias_melastigma
ENSORLG00000018862	nob1	99	57.908	ENSOGAG00000004590	NOB1	99	58.637	Otolemur_garnettii
ENSORLG00000018862	nob1	100	64.096	ENSOARG00000003606	NOB1	100	63.855	Ovis_aries
ENSORLG00000018862	nob1	100	63.373	ENSPPAG00000040257	NOB1	100	64.096	Pan_paniscus
ENSORLG00000018862	nob1	97	58.524	ENSPPAG00000003317	-	100	58.015	Pan_paniscus
ENSORLG00000018862	nob1	100	64.029	ENSPPRG00000016949	NOB1	100	64.269	Panthera_pardus
ENSORLG00000018862	nob1	100	63.789	ENSPTIG00000011234	NOB1	100	64.029	Panthera_tigris_altaica
ENSORLG00000018862	nob1	100	63.373	ENSPTRG00000008285	NOB1	100	64.337	Pan_troglodytes
ENSORLG00000018862	nob1	100	63.373	ENSPANG00000015858	NOB1	100	64.337	Papio_anubis
ENSORLG00000018862	nob1	100	64.252	ENSPKIG00000020293	nob1	100	65.412	Paramormyrops_kingsleyae
ENSORLG00000018862	nob1	99	60.047	ENSPSIG00000012477	NOB1	100	61.157	Pelodiscus_sinensis
ENSORLG00000018862	nob1	99	69.154	ENSPMGG00000023476	nob1	100	70.398	Periophthalmus_magnuspinnatus
ENSORLG00000018862	nob1	100	66.341	ENSPEMG00000010995	Nob1	100	66.585	Peromyscus_maniculatus_bairdii
ENSORLG00000018862	nob1	51	74.510	ENSPCIG00000007274	-	81	74.757	Phascolarctos_cinereus
ENSORLG00000018862	nob1	83	68.508	ENSPFOG00000000027	nob1	100	67.956	Poecilia_formosa
ENSORLG00000018862	nob1	66	71.273	ENSPLAG00000011546	nob1	99	71.918	Poecilia_latipinna
ENSORLG00000018862	nob1	100	71.429	ENSPMEG00000023435	nob1	100	70.944	Poecilia_mexicana
ENSORLG00000018862	nob1	99	68.737	ENSPREG00000007675	nob1	100	69.872	Poecilia_reticulata
ENSORLG00000018862	nob1	100	63.768	ENSPPYG00000007509	NOB1	100	64.251	Pongo_abelii
ENSORLG00000018862	nob1	100	61.190	ENSPCAG00000001527	NOB1	100	61.667	Procavia_capensis
ENSORLG00000018862	nob1	100	64.891	ENSPCOG00000025515	NOB1	100	65.133	Propithecus_coquereli
ENSORLG00000018862	nob1	77	44.099	ENSPVAG00000013330	NOB1	78	44.099	Pteropus_vampyrus
ENSORLG00000018862	nob1	100	72.195	ENSPNYG00000018449	nob1	100	72.593	Pundamilia_nyererei
ENSORLG00000018862	nob1	100	59.775	ENSPNAG00000004244	nob1	99	61.416	Pygocentrus_nattereri
ENSORLG00000018862	nob1	100	64.165	ENSRNOG00000021890	Nob1	100	64.165	Rattus_norvegicus
ENSORLG00000018862	nob1	100	63.702	ENSRBIG00000019599	NOB1	100	64.423	Rhinopithecus_bieti
ENSORLG00000018862	nob1	100	63.702	ENSRROG00000033419	NOB1	100	64.423	Rhinopithecus_roxellana
ENSORLG00000018862	nob1	67	32.110	YOR056C	NOB1	69	32.110	Saccharomyces_cerevisiae
ENSORLG00000018862	nob1	83	61.494	ENSSBOG00000029042	NOB1	89	62.356	Saimiri_boliviensis_boliviensis
ENSORLG00000018862	nob1	99	64.578	ENSSHAG00000015387	NOB1	99	64.578	Sarcophilus_harrisii
ENSORLG00000018862	nob1	100	64.679	ENSSFOG00015008503	nob1	100	64.828	Scleropages_formosus
ENSORLG00000018862	nob1	100	76.755	ENSSMAG00000003064	nob1	100	75.061	Scophthalmus_maximus
ENSORLG00000018862	nob1	100	75.837	ENSSDUG00000007307	nob1	100	77.053	Seriola_dumerili
ENSORLG00000018862	nob1	72	85.380	ENSSLDG00000011459	-	98	85.380	Seriola_lalandi_dorsalis
ENSORLG00000018862	nob1	87	60.763	ENSSPUG00000005621	NOB1	99	62.931	Sphenodon_punctatus
ENSORLG00000018862	nob1	100	77.586	ENSSPAG00000022362	nob1	100	77.340	Stegastes_partitus
ENSORLG00000018862	nob1	100	63.942	ENSSSCG00000002753	NOB1	100	63.942	Sus_scrofa
ENSORLG00000018862	nob1	51	69.302	ENSTGUG00000008124	NOB1	93	69.302	Taeniopygia_guttata
ENSORLG00000018862	nob1	99	68.966	ENSTRUG00000004780	nob1	100	69.425	Takifugu_rubripes
ENSORLG00000018862	nob1	99	68.966	ENSTRUG00000023145	nob1	100	69.425	Takifugu_rubripes
ENSORLG00000018862	nob1	99	74.396	ENSTNIG00000002552	nob1	100	74.638	Tetraodon_nigroviridis
ENSORLG00000018862	nob1	73	46.049	ENSTBEG00000000690	NOB1	64	45.753	Tupaia_belangeri
ENSORLG00000018862	nob1	61	65.098	ENSUAMG00000028135	NOB1	99	65.759	Ursus_americanus
ENSORLG00000018862	nob1	99	63.923	ENSUMAG00000018658	NOB1	94	64.165	Ursus_maritimus
ENSORLG00000018862	nob1	99	63.855	ENSVVUG00000017271	NOB1	99	63.835	Vulpes_vulpes
ENSORLG00000018862	nob1	100	62.243	ENSXETG00000017874	nob1	99	61.416	Xenopus_tropicalis
ENSORLG00000018862	nob1	83	69.501	ENSXCOG00000009734	nob1	100	70.030	Xiphophorus_couchianus
ENSORLG00000018862	nob1	100	68.735	ENSXMAG00000017371	nob1	100	68.900	Xiphophorus_maculatus