EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000019015 (Gene tree)
Gene ID: 101157506
Gene Symbol: trmu
Alias: -
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 5959 bases
Position: chr23:344051-350009
Accession: 101157506
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000023721	tRNA_Me_trans	PF03054.16	1e-134	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000023722	-	1245	XM_004084316	ENSORLP00000023721	414 (aa)	XP_004084364	H2MXP7

Gene Model

Click here to download ENSORLG00000019015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000019015's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000019015	trmu	98	68.642	ENSG00000100416	TRMU	99	70.270	Homo_sapiens
ENSORLG00000019015	trmu	99	81.731	ENSAPOG00000014458	trmu	99	81.731	Acanthochromis_polyacanthus
ENSORLG00000019015	trmu	97	69.825	ENSAMEG00000003319	TRMU	96	69.825	Ailuropoda_melanoleuca
ENSORLG00000019015	trmu	99	81.250	ENSACIG00000002101	trmu	100	81.250	Amphilophus_citrinellus
ENSORLG00000019015	trmu	99	83.333	ENSAOCG00000013155	trmu	99	83.333	Amphiprion_ocellaris
ENSORLG00000019015	trmu	99	82.850	ENSAPEG00000013350	trmu	99	82.850	Amphiprion_percula
ENSORLG00000019015	trmu	99	80.340	ENSATEG00000007814	trmu	100	80.340	Anabas_testudineus
ENSORLG00000019015	trmu	92	70.449	ENSAPLG00000016380	TRMU	97	70.449	Anas_platyrhynchos
ENSORLG00000019015	trmu	97	70.647	ENSACAG00000007720	TRMU	96	70.647	Anolis_carolinensis
ENSORLG00000019015	trmu	98	68.642	ENSANAG00000038053	TRMU	96	68.642	Aotus_nancymaae
ENSORLG00000019015	trmu	99	83.051	ENSACLG00000005395	trmu	99	83.051	Astatotilapia_calliptera
ENSORLG00000019015	trmu	99	73.415	ENSAMXG00000005282	trmu	99	73.415	Astyanax_mexicanus
ENSORLG00000019015	trmu	99	68.460	ENSBTAG00000005595	TRMU	98	68.460	Bos_taurus
ENSORLG00000019015	trmu	92	39.535	WBGene00007114	mttu-1	98	39.535	Caenorhabditis_elegans
ENSORLG00000019015	trmu	99	66.993	ENSCJAG00000000198	TRMU	97	66.993	Callithrix_jacchus
ENSORLG00000019015	trmu	98	69.136	ENSCAFG00000000779	TRMU	95	69.136	Canis_familiaris
ENSORLG00000019015	trmu	98	69.136	ENSCAFG00020009184	TRMU	95	69.136	Canis_lupus_dingo
ENSORLG00000019015	trmu	98	68.642	ENSCHIG00000017074	TRMU	97	68.642	Capra_hircus
ENSORLG00000019015	trmu	96	70.175	ENSTSYG00000003853	TRMU	95	70.175	Carlito_syrichta
ENSORLG00000019015	trmu	94	65.602	ENSCAPG00000013034	TRMU	96	65.602	Cavia_aperea
ENSORLG00000019015	trmu	97	69.727	ENSCPOG00000020780	TRMU	96	69.727	Cavia_porcellus
ENSORLG00000019015	trmu	99	67.718	ENSCCAG00000021641	TRMU	98	67.718	Cebus_capucinus
ENSORLG00000019015	trmu	98	67.241	ENSCATG00000032800	TRMU	96	67.241	Cercocebus_atys
ENSORLG00000019015	trmu	97	69.727	ENSCLAG00000017269	TRMU	96	69.727	Chinchilla_lanigera
ENSORLG00000019015	trmu	98	67.901	ENSCSAG00000005279	TRMU	96	67.901	Chlorocebus_sabaeus
ENSORLG00000019015	trmu	90	69.355	ENSCPBG00000011621	TRMU	93	69.355	Chrysemys_picta_bellii
ENSORLG00000019015	trmu	94	48.454	ENSCING00000019371	-	95	48.454	Ciona_intestinalis
ENSORLG00000019015	trmu	99	67.233	ENSCANG00000041645	TRMU	98	67.233	Colobus_angolensis_palliatus
ENSORLG00000019015	trmu	99	66.586	ENSCGRG00001001739	Trmu	97	66.586	Cricetulus_griseus_chok1gshd
ENSORLG00000019015	trmu	99	61.017	ENSCGRG00000002781	Trmu	97	61.017	Cricetulus_griseus_crigri
ENSORLG00000019015	trmu	99	76.829	ENSCSEG00000012382	trmu	99	76.829	Cynoglossus_semilaevis
ENSORLG00000019015	trmu	99	81.446	ENSCVAG00000001366	trmu	99	81.446	Cyprinodon_variegatus
ENSORLG00000019015	trmu	99	70.913	ENSDARG00000043734	trmu	100	70.913	Danio_rerio
ENSORLG00000019015	trmu	64	57.463	ENSDNOG00000047245	-	94	57.463	Dasypus_novemcinctus
ENSORLG00000019015	trmu	99	69.363	ENSDORG00000007455	Trmu	99	69.363	Dipodomys_ordii
ENSORLG00000019015	trmu	93	43.523	FBgn0040337	CG3021	95	43.523	Drosophila_melanogaster
ENSORLG00000019015	trmu	93	55.499	ENSEBUG00000007454	trmu	100	54.179	Eptatretus_burgeri
ENSORLG00000019015	trmu	98	70.123	ENSEASG00005021725	TRMU	96	70.123	Equus_asinus_asinus
ENSORLG00000019015	trmu	98	70.123	ENSECAG00000000467	TRMU	96	70.123	Equus_caballus
ENSORLG00000019015	trmu	69	52.797	ENSEEUG00000000074	-	68	52.797	Erinaceus_europaeus
ENSORLG00000019015	trmu	99	76.087	ENSELUG00000009464	trmu	99	77.446	Esox_lucius
ENSORLG00000019015	trmu	96	70.175	ENSFCAG00000006533	TRMU	95	70.175	Felis_catus
ENSORLG00000019015	trmu	92	69.509	ENSFALG00000010035	TRMU	98	69.509	Ficedula_albicollis
ENSORLG00000019015	trmu	91	67.460	ENSFDAG00000017472	TRMU	96	67.460	Fukomys_damarensis
ENSORLG00000019015	trmu	99	82.410	ENSFHEG00000003162	trmu	99	82.410	Fundulus_heteroclitus
ENSORLG00000019015	trmu	97	71.253	ENSGMOG00000001323	trmu	100	71.253	Gadus_morhua
ENSORLG00000019015	trmu	97	70.000	ENSGALG00000031922	TRMU	97	70.000	Gallus_gallus
ENSORLG00000019015	trmu	98	83.744	ENSGAFG00000013331	trmu	97	83.744	Gambusia_affinis
ENSORLG00000019015	trmu	99	79.147	ENSGACG00000019024	trmu	99	79.147	Gasterosteus_aculeatus
ENSORLG00000019015	trmu	98	68.395	ENSGGOG00000000203	TRMU	96	68.395	Gorilla_gorilla
ENSORLG00000019015	trmu	99	83.051	ENSHBUG00000023421	trmu	99	83.051	Haplochromis_burtoni
ENSORLG00000019015	trmu	97	68.408	ENSHGLG00000009278	TRMU	95	68.408	Heterocephalus_glaber_female
ENSORLG00000019015	trmu	97	68.408	ENSHGLG00100018863	TRMU	95	68.408	Heterocephalus_glaber_male
ENSORLG00000019015	trmu	100	78.072	ENSHCOG00000013459	trmu	100	78.072	Hippocampus_comes
ENSORLG00000019015	trmu	96	75.940	ENSIPUG00000009785	trmu	98	75.940	Ictalurus_punctatus
ENSORLG00000019015	trmu	99	68.949	ENSSTOG00000010993	TRMU	96	68.949	Ictidomys_tridecemlineatus
ENSORLG00000019015	trmu	97	69.154	ENSJJAG00000000667	Trmu	96	69.154	Jaculus_jaculus
ENSORLG00000019015	trmu	99	81.446	ENSKMAG00000008516	trmu	99	81.446	Kryptolebias_marmoratus
ENSORLG00000019015	trmu	99	79.759	ENSLBEG00000018831	trmu	99	79.759	Labrus_bergylta
ENSORLG00000019015	trmu	97	72.208	ENSLACG00000013713	TRMU	96	72.208	Latimeria_chalumnae
ENSORLG00000019015	trmu	97	76.808	ENSLOCG00000016066	trmu	96	76.808	Lepisosteus_oculatus
ENSORLG00000019015	trmu	95	61.809	ENSLAFG00000005129	TRMU	95	61.809	Loxodonta_africana
ENSORLG00000019015	trmu	98	68.148	ENSMFAG00000039767	TRMU	96	68.148	Macaca_fascicularis
ENSORLG00000019015	trmu	98	68.148	ENSMMUG00000000807	TRMU	96	68.148	Macaca_mulatta
ENSORLG00000019015	trmu	98	68.148	ENSMNEG00000028164	TRMU	96	68.148	Macaca_nemestrina
ENSORLG00000019015	trmu	98	67.654	ENSMLEG00000033884	TRMU	96	67.654	Mandrillus_leucophaeus
ENSORLG00000019015	trmu	99	79.903	ENSMAMG00000004717	trmu	99	79.903	Mastacembelus_armatus
ENSORLG00000019015	trmu	99	83.051	ENSMZEG00005015797	trmu	99	83.051	Maylandia_zebra
ENSORLG00000019015	trmu	79	67.868	ENSMGAG00000007550	TRMU	97	67.868	Meleagris_gallopavo
ENSORLG00000019015	trmu	96	67.669	ENSMAUG00000022282	Trmu	96	67.669	Mesocricetus_auratus
ENSORLG00000019015	trmu	95	69.114	ENSMICG00000029046	TRMU	96	69.114	Microcebus_murinus
ENSORLG00000019015	trmu	97	67.990	ENSMOCG00000014641	Trmu	97	67.990	Microtus_ochrogaster
ENSORLG00000019015	trmu	99	78.313	ENSMMOG00000007229	trmu	99	78.313	Mola_mola
ENSORLG00000019015	trmu	96	66.332	ENSMODG00000007433	TRMU	93	66.332	Monodelphis_domestica
ENSORLG00000019015	trmu	99	79.277	ENSMALG00000007721	trmu	99	79.277	Monopterus_albus
ENSORLG00000019015	trmu	99	66.586	MGP_CAROLIEiJ_G0020134	Trmu	98	66.586	Mus_caroli
ENSORLG00000019015	trmu	99	66.586	ENSMUSG00000022386	Trmu	98	66.586	Mus_musculus
ENSORLG00000019015	trmu	99	66.344	MGP_PahariEiJ_G0020139	Trmu	98	66.344	Mus_pahari
ENSORLG00000019015	trmu	99	66.586	MGP_SPRETEiJ_G0021031	Trmu	98	66.586	Mus_spretus
ENSORLG00000019015	trmu	98	69.383	ENSMPUG00000002523	TRMU	96	69.383	Mustela_putorius_furo
ENSORLG00000019015	trmu	99	68.116	ENSNGAG00000005132	Trmu	99	68.116	Nannospalax_galili
ENSORLG00000019015	trmu	99	82.567	ENSNBRG00000022690	trmu	99	82.716	Neolamprologus_brichardi
ENSORLG00000019015	trmu	98	68.395	ENSNLEG00000015773	TRMU	96	68.395	Nomascus_leucogenys
ENSORLG00000019015	trmu	79	56.881	ENSMEUG00000000216	TRMU	99	56.881	Notamacropus_eugenii
ENSORLG00000019015	trmu	97	68.486	ENSODEG00000014745	TRMU	97	68.148	Octodon_degus
ENSORLG00000019015	trmu	99	83.293	ENSONIG00000009821	trmu	99	83.293	Oreochromis_niloticus
ENSORLG00000019015	trmu	93	63.918	ENSOANG00000001891	TRMU	98	63.918	Ornithorhynchus_anatinus
ENSORLG00000019015	trmu	91	68.617	ENSOCUG00000003664	TRMU	94	67.513	Oryctolagus_cuniculus
ENSORLG00000019015	trmu	100	99.517	ENSORLG00020006830	trmu	100	99.517	Oryzias_latipes_hni
ENSORLG00000019015	trmu	100	99.517	ENSORLG00015003907	trmu	100	99.517	Oryzias_latipes_hsok
ENSORLG00000019015	trmu	55	91.266	ENSOMEG00000015541	trmu	83	91.266	Oryzias_melastigma
ENSORLG00000019015	trmu	98	67.160	ENSOGAG00000008096	TRMU	97	67.160	Otolemur_garnettii
ENSORLG00000019015	trmu	92	66.579	ENSOARG00000019475	TRMU	93	66.579	Ovis_aries
ENSORLG00000019015	trmu	98	68.395	ENSPPAG00000033944	TRMU	96	68.395	Pan_paniscus
ENSORLG00000019015	trmu	96	70.175	ENSPPRG00000004197	TRMU	95	70.175	Panthera_pardus
ENSORLG00000019015	trmu	67	69.314	ENSPTIG00000014122	TRMU	97	70.833	Panthera_tigris_altaica
ENSORLG00000019015	trmu	98	68.395	ENSPTRG00000014510	TRMU	96	68.395	Pan_troglodytes
ENSORLG00000019015	trmu	95	68.861	ENSPANG00000023074	TRMU	97	65.753	Papio_anubis
ENSORLG00000019015	trmu	99	72.639	ENSPKIG00000002849	trmu	99	72.639	Paramormyrops_kingsleyae
ENSORLG00000019015	trmu	88	70.330	ENSPSIG00000013020	TRMU	95	70.330	Pelodiscus_sinensis
ENSORLG00000019015	trmu	99	79.319	ENSPMGG00000004083	trmu	99	79.319	Periophthalmus_magnuspinnatus
ENSORLG00000019015	trmu	96	67.669	ENSPEMG00000014007	Trmu	96	67.669	Peromyscus_maniculatus_bairdii
ENSORLG00000019015	trmu	95	65.394	ENSPCIG00000009923	TRMU	93	65.239	Phascolarctos_cinereus
ENSORLG00000019015	trmu	97	78.750	ENSPFOG00000008197	trmu	89	78.750	Poecilia_formosa
ENSORLG00000019015	trmu	99	82.439	ENSPLAG00000008414	trmu	99	82.439	Poecilia_latipinna
ENSORLG00000019015	trmu	99	82.683	ENSPMEG00000004326	trmu	99	82.683	Poecilia_mexicana
ENSORLG00000019015	trmu	99	82.169	ENSPREG00000007980	trmu	99	82.169	Poecilia_reticulata
ENSORLG00000019015	trmu	98	68.395	ENSPPYG00000011949	TRMU	96	68.395	Pongo_abelii
ENSORLG00000019015	trmu	91	62.334	ENSPCAG00000013462	TRMU	97	62.334	Procavia_capensis
ENSORLG00000019015	trmu	97	67.830	ENSPCOG00000016539	TRMU	96	67.830	Propithecus_coquereli
ENSORLG00000019015	trmu	97	63.342	ENSPVAG00000013202	TRMU	96	63.342	Pteropus_vampyrus
ENSORLG00000019015	trmu	99	82.567	ENSPNYG00000005629	trmu	99	82.567	Pundamilia_nyererei
ENSORLG00000019015	trmu	97	76.559	ENSPNAG00000006339	trmu	94	76.559	Pygocentrus_nattereri
ENSORLG00000019015	trmu	99	66.586	ENSRNOG00000016465	Trmu	98	66.586	Rattus_norvegicus
ENSORLG00000019015	trmu	98	67.160	ENSRBIG00000038973	TRMU	96	67.160	Rhinopithecus_bieti
ENSORLG00000019015	trmu	98	67.407	ENSRROG00000004267	TRMU	96	67.407	Rhinopithecus_roxellana
ENSORLG00000019015	trmu	93	33.333	YDL033C	SLM3	93	33.333	Saccharomyces_cerevisiae
ENSORLG00000019015	trmu	98	68.317	ENSSBOG00000030184	TRMU	96	68.317	Saimiri_boliviensis_boliviensis
ENSORLG00000019015	trmu	89	72.432	ENSSFOG00015020664	trmu	97	72.432	Scleropages_formosus
ENSORLG00000019015	trmu	99	81.687	ENSSMAG00000019450	trmu	99	81.687	Scophthalmus_maximus
ENSORLG00000019015	trmu	99	83.133	ENSSDUG00000011913	trmu	99	83.133	Seriola_dumerili
ENSORLG00000019015	trmu	99	82.892	ENSSLDG00000011684	trmu	99	82.892	Seriola_lalandi_dorsalis
ENSORLG00000019015	trmu	99	58.780	ENSSPUG00000017123	TRMU	97	58.780	Sphenodon_punctatus
ENSORLG00000019015	trmu	99	81.598	ENSSPAG00000021875	trmu	99	81.598	Stegastes_partitus
ENSORLG00000019015	trmu	99	67.482	ENSSSCG00000000007	TRMU	98	66.828	Sus_scrofa
ENSORLG00000019015	trmu	90	71.850	ENSTGUG00000003663	-	100	71.850	Taeniopygia_guttata
ENSORLG00000019015	trmu	99	80.825	ENSTRUG00000001231	trmu	99	80.825	Takifugu_rubripes
ENSORLG00000019015	trmu	100	79.426	ENSTNIG00000010484	trmu	99	79.426	Tetraodon_nigroviridis
ENSORLG00000019015	trmu	89	42.547	ENSTBEG00000011276	-	95	42.547	Tupaia_belangeri
ENSORLG00000019015	trmu	97	70.075	ENSTTRG00000004160	TRMU	95	70.075	Tursiops_truncatus
ENSORLG00000019015	trmu	71	70.548	ENSUAMG00000024825	TRMU	97	70.548	Ursus_americanus
ENSORLG00000019015	trmu	96	57.683	ENSUMAG00000019079	TRMU	97	69.650	Ursus_maritimus
ENSORLG00000019015	trmu	51	60.094	ENSVPAG00000000685	-	98	60.094	Vicugna_pacos
ENSORLG00000019015	trmu	98	68.395	ENSVVUG00000024963	TRMU	96	68.395	Vulpes_vulpes
ENSORLG00000019015	trmu	97	71.712	ENSXETG00000023304	trmu	95	71.712	Xenopus_tropicalis
ENSORLG00000019015	trmu	99	80.383	ENSXCOG00000015105	trmu	99	80.383	Xiphophorus_couchianus
ENSORLG00000019015	trmu	99	82.892	ENSXMAG00000006697	trmu	99	82.892	Xiphophorus_maculatus