EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000019098 (Gene tree)
Gene ID: 101160147
Gene Symbol: YTHDC2
Alias: -
Full Name: YTH domain containing 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 118885 bases
Position: chr24:18421465-18540349
Accession: 101160147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000023815	R3H	PF01424.22	1.1e-07	1	1
ENSORLP00000036433	DEAD	PF00270.29	9.7e-08	1	1
ENSORLP00000023815	DEAD	PF00270.29	1.1e-07	1	1
ENSORLP00000036433	YTH	PF04146.15	1.2e-41	1	1
ENSORLP00000023815	YTH	PF04146.15	7.1e-16	1	1
ENSORLP00000023815	HA2	PF04408.23	4.2e-21	1	1
ENSORLP00000036433	HA2	PF04408.23	4.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000023816	YTHDC2-201	4260	XM_020701809	ENSORLP00000023815	1284 (aa)	XP_020557468	H2MXX7
ENSORLT00000039507	YTHDC2-202	3519	-	ENSORLP00000036433	1172 (aa)	-	-

Gene Model

Click here to download ENSORLG00000019098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000019098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000019098	YTHDC2	63	47.222	ENSORLG00000007454	dhx9	58	44.796
ENSORLG00000019098	YTHDC2	51	39.732	ENSORLG00000011817	dhx33	87	39.732
ENSORLG00000019098	YTHDC2	53	42.347	ENSORLG00000029010	DHX15	78	42.132
ENSORLG00000019098	YTHDC2	53	42.857	ENSORLG00000004819	dhx15	83	42.857
ENSORLG00000019098	YTHDC2	52	40.306	ENSORLG00000015982	dhx16	55	40.306
ENSORLG00000019098	YTHDC2	53	38.743	ENSORLG00000009467	zgc:158828	85	38.743
ENSORLG00000019098	YTHDC2	60	44.382	ENSORLG00000017276	dhx30	62	44.162
ENSORLG00000019098	YTHDC2	51	34.706	ENSORLG00000014277	dqx1	75	34.706
ENSORLG00000019098	YTHDC2	50	41.935	ENSORLG00000014185	dhx40	81	41.935
ENSORLG00000019098	YTHDC2	62	47.059	ENSORLG00000005842	dhx36	84	45.876
ENSORLG00000019098	YTHDC2	74	34.797	ENSORLG00000010748	dhx57	53	50.000
ENSORLG00000019098	YTHDC2	69	32.732	ENSORLG00000005364	dhx29	52	46.377

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000019098	YTHDC2	90	73.892	ENSG00000047188	YTHDC2	96	51.662	Homo_sapiens
ENSORLG00000019098	YTHDC2	72	66.740	ENSAPOG00000013442	YTHDC2	87	66.740	Acanthochromis_polyacanthus
ENSORLG00000019098	YTHDC2	90	73.892	ENSAMEG00000006598	YTHDC2	92	54.970	Ailuropoda_melanoleuca
ENSORLG00000019098	YTHDC2	91	74.545	ENSACIG00000012809	YTHDC2	93	63.072	Amphilophus_citrinellus
ENSORLG00000019098	YTHDC2	91	75.217	ENSAOCG00000018480	YTHDC2	90	75.217	Amphiprion_ocellaris
ENSORLG00000019098	YTHDC2	92	75.652	ENSAPEG00000014873	YTHDC2	93	63.767	Amphiprion_percula
ENSORLG00000019098	YTHDC2	90	78.469	ENSATEG00000010847	YTHDC2	80	78.469	Anabas_testudineus
ENSORLG00000019098	YTHDC2	51	55.976	ENSAPLG00000013814	YTHDC2	86	70.677	Anas_platyrhynchos
ENSORLG00000019098	YTHDC2	87	74.436	ENSACAG00000007754	YTHDC2	73	74.436	Anolis_carolinensis
ENSORLG00000019098	YTHDC2	87	73.399	ENSANAG00000022177	YTHDC2	73	73.399	Aotus_nancymaae
ENSORLG00000019098	YTHDC2	99	61.538	ENSACLG00000019069	YTHDC2	92	61.538	Astatotilapia_calliptera
ENSORLG00000019098	YTHDC2	90	74.163	ENSAMXG00000008735	YTHDC2	80	74.163	Astyanax_mexicanus
ENSORLG00000019098	YTHDC2	90	73.892	ENSBTAG00000014099	YTHDC2	83	73.892	Bos_taurus
ENSORLG00000019098	YTHDC2	87	73.892	ENSCJAG00000016598	YTHDC2	75	73.892	Callithrix_jacchus
ENSORLG00000019098	YTHDC2	90	73.529	ENSCAFG00000000224	YTHDC2	97	57.975	Canis_familiaris
ENSORLG00000019098	YTHDC2	90	73.892	ENSCAFG00020003668	YTHDC2	94	54.309	Canis_lupus_dingo
ENSORLG00000019098	YTHDC2	90	73.892	ENSCHIG00000026651	YTHDC2	98	55.267	Capra_hircus
ENSORLG00000019098	YTHDC2	87	73.892	ENSTSYG00000009634	YTHDC2	75	73.892	Carlito_syrichta
ENSORLG00000019098	YTHDC2	80	44.768	ENSCAPG00000015691	YTHDC2	86	44.768	Cavia_aperea
ENSORLG00000019098	YTHDC2	90	73.892	ENSCPOG00000000272	YTHDC2	73	73.892	Cavia_porcellus
ENSORLG00000019098	YTHDC2	87	73.892	ENSCCAG00000037613	YTHDC2	92	55.064	Cebus_capucinus
ENSORLG00000019098	YTHDC2	90	73.892	ENSCATG00000031670	YTHDC2	92	54.914	Cercocebus_atys
ENSORLG00000019098	YTHDC2	90	70.673	ENSCLAG00000014076	YTHDC2	73	72.932	Chinchilla_lanigera
ENSORLG00000019098	YTHDC2	90	73.892	ENSCSAG00000014899	YTHDC2	73	73.892	Chlorocebus_sabaeus
ENSORLG00000019098	YTHDC2	79	71.429	ENSCHOG00000013323	YTHDC2	76	71.429	Choloepus_hoffmanni
ENSORLG00000019098	YTHDC2	87	73.399	ENSCPBG00000013876	YTHDC2	92	54.875	Chrysemys_picta_bellii
ENSORLG00000019098	YTHDC2	90	73.892	ENSCANG00000025759	YTHDC2	92	54.989	Colobus_angolensis_palliatus
ENSORLG00000019098	YTHDC2	90	74.384	ENSCGRG00001021338	Ythdc2	73	74.384	Cricetulus_griseus_chok1gshd
ENSORLG00000019098	YTHDC2	90	74.384	ENSCGRG00000010336	Ythdc2	74	74.384	Cricetulus_griseus_crigri
ENSORLG00000019098	YTHDC2	88	52.021	ENSCSEG00000017911	YTHDC2	97	52.021	Cynoglossus_semilaevis
ENSORLG00000019098	YTHDC2	91	77.130	ENSCVAG00000021377	YTHDC2	80	77.130	Cyprinodon_variegatus
ENSORLG00000019098	YTHDC2	91	67.421	ENSDARG00000103525	YTHDC2	81	67.421	Danio_rerio
ENSORLG00000019098	YTHDC2	90	73.892	ENSDNOG00000012198	YTHDC2	73	73.892	Dasypus_novemcinctus
ENSORLG00000019098	YTHDC2	90	74.384	ENSDORG00000007057	Ythdc2	73	74.384	Dipodomys_ordii
ENSORLG00000019098	YTHDC2	56	41.379	FBgn0030833	CG8915	77	35.735	Drosophila_melanogaster
ENSORLG00000019098	YTHDC2	75	75.000	ENSETEG00000013681	YTHDC2	69	75.000	Echinops_telfairi
ENSORLG00000019098	YTHDC2	89	57.921	ENSEBUG00000014315	-	75	57.921	Eptatretus_burgeri
ENSORLG00000019098	YTHDC2	90	73.892	ENSEASG00005015135	YTHDC2	92	54.921	Equus_asinus_asinus
ENSORLG00000019098	YTHDC2	90	73.892	ENSECAG00000020630	YTHDC2	96	54.996	Equus_caballus
ENSORLG00000019098	YTHDC2	80	74.138	ENSEEUG00000008580	YTHDC2	64	73.026	Erinaceus_europaeus
ENSORLG00000019098	YTHDC2	87	76.555	ENSELUG00000015902	YTHDC2	93	56.103	Esox_lucius
ENSORLG00000019098	YTHDC2	90	73.892	ENSFCAG00000031967	YTHDC2	78	73.892	Felis_catus
ENSORLG00000019098	YTHDC2	90	69.951	ENSFALG00000002623	-	80	72.727	Ficedula_albicollis
ENSORLG00000019098	YTHDC2	86	69.925	ENSFALG00000000040	-	83	68.966	Ficedula_albicollis
ENSORLG00000019098	YTHDC2	90	73.399	ENSFDAG00000008701	YTHDC2	94	55.094	Fukomys_damarensis
ENSORLG00000019098	YTHDC2	91	78.475	ENSFHEG00000009312	YTHDC2	80	77.982	Fundulus_heteroclitus
ENSORLG00000019098	YTHDC2	54	67.016	ENSGMOG00000000789	YTHDC2	85	67.016	Gadus_morhua
ENSORLG00000019098	YTHDC2	90	70.792	ENSGALG00000000189	YTHDC2	83	70.792	Gallus_gallus
ENSORLG00000019098	YTHDC2	78	83.254	ENSGAFG00000008158	YTHDC2	75	83.254	Gambusia_affinis
ENSORLG00000019098	YTHDC2	55	78.537	ENSGACG00000018569	YTHDC2	98	72.627	Gasterosteus_aculeatus
ENSORLG00000019098	YTHDC2	87	73.399	ENSGAGG00000010063	YTHDC2	98	54.777	Gopherus_agassizii
ENSORLG00000019098	YTHDC2	90	73.892	ENSGGOG00000014407	YTHDC2	92	54.914	Gorilla_gorilla
ENSORLG00000019098	YTHDC2	88	65.061	ENSHBUG00000007492	YTHDC2	93	65.061	Haplochromis_burtoni
ENSORLG00000019098	YTHDC2	90	73.399	ENSHGLG00000019014	YTHDC2	79	73.399	Heterocephalus_glaber_female
ENSORLG00000019098	YTHDC2	90	73.399	ENSHGLG00100008192	YTHDC2	79	73.399	Heterocephalus_glaber_male
ENSORLG00000019098	YTHDC2	89	79.661	ENSHCOG00000014281	YTHDC2	88	79.661	Hippocampus_comes
ENSORLG00000019098	YTHDC2	90	75.120	ENSIPUG00000019561	ythdc2	78	75.120	Ictalurus_punctatus
ENSORLG00000019098	YTHDC2	90	74.384	ENSSTOG00000013239	YTHDC2	73	74.384	Ictidomys_tridecemlineatus
ENSORLG00000019098	YTHDC2	90	73.892	ENSJJAG00000017908	Ythdc2	73	73.892	Jaculus_jaculus
ENSORLG00000019098	YTHDC2	90	79.535	ENSKMAG00000015969	YTHDC2	82	79.535	Kryptolebias_marmoratus
ENSORLG00000019098	YTHDC2	90	77.727	ENSLBEG00000027926	YTHDC2	94	61.210	Labrus_bergylta
ENSORLG00000019098	YTHDC2	86	73.892	ENSLACG00000010991	YTHDC2	92	55.598	Latimeria_chalumnae
ENSORLG00000019098	YTHDC2	86	77.073	ENSLOCG00000009001	YTHDC2	73	77.073	Lepisosteus_oculatus
ENSORLG00000019098	YTHDC2	90	73.892	ENSLAFG00000003538	YTHDC2	82	73.892	Loxodonta_africana
ENSORLG00000019098	YTHDC2	51	56.822	ENSMMUG00000001376	-	86	72.932	Macaca_mulatta
ENSORLG00000019098	YTHDC2	90	73.892	ENSMNEG00000040900	YTHDC2	92	54.914	Macaca_nemestrina
ENSORLG00000019098	YTHDC2	90	73.892	ENSMLEG00000043185	YTHDC2	92	54.962	Mandrillus_leucophaeus
ENSORLG00000019098	YTHDC2	90	81.281	ENSMAMG00000019193	YTHDC2	80	81.281	Mastacembelus_armatus
ENSORLG00000019098	YTHDC2	91	78.125	ENSMZEG00005009153	YTHDC2	81	78.125	Maylandia_zebra
ENSORLG00000019098	YTHDC2	86	60.891	ENSMGAG00000006674	YTHDC2	95	51.507	Meleagris_gallopavo
ENSORLG00000019098	YTHDC2	90	74.384	ENSMAUG00000016179	Ythdc2	73	74.384	Mesocricetus_auratus
ENSORLG00000019098	YTHDC2	90	73.892	ENSMICG00000004030	YTHDC2	78	73.892	Microcebus_murinus
ENSORLG00000019098	YTHDC2	90	73.892	ENSMOCG00000011740	Ythdc2	92	55.196	Microtus_ochrogaster
ENSORLG00000019098	YTHDC2	94	60.115	ENSMMOG00000011758	YTHDC2	99	60.115	Mola_mola
ENSORLG00000019098	YTHDC2	90	73.892	ENSMODG00000015671	YTHDC2	73	73.892	Monodelphis_domestica
ENSORLG00000019098	YTHDC2	93	63.002	ENSMALG00000002782	YTHDC2	98	63.002	Monopterus_albus
ENSORLG00000019098	YTHDC2	90	74.384	MGP_CAROLIEiJ_G0022248	Ythdc2	97	63.636	Mus_caroli
ENSORLG00000019098	YTHDC2	90	74.384	ENSMUSG00000034653	Ythdc2	97	63.636	Mus_musculus
ENSORLG00000019098	YTHDC2	90	74.384	MGP_PahariEiJ_G0018981	Ythdc2	97	63.636	Mus_pahari
ENSORLG00000019098	YTHDC2	90	74.384	MGP_SPRETEiJ_G0023159	Ythdc2	96	64.071	Mus_spretus
ENSORLG00000019098	YTHDC2	90	73.892	ENSMPUG00000000755	YTHDC2	76	73.892	Mustela_putorius_furo
ENSORLG00000019098	YTHDC2	90	73.399	ENSMLUG00000006106	YTHDC2	73	73.399	Myotis_lucifugus
ENSORLG00000019098	YTHDC2	90	74.384	ENSNGAG00000017798	Ythdc2	74	74.384	Nannospalax_galili
ENSORLG00000019098	YTHDC2	95	59.983	ENSNBRG00000000762	YTHDC2	83	65.022	Neolamprologus_brichardi
ENSORLG00000019098	YTHDC2	85	73.892	ENSNLEG00000011648	YTHDC2	92	54.914	Nomascus_leucogenys
ENSORLG00000019098	YTHDC2	72	57.447	ENSMEUG00000004414	YTHDC2	59	72.932	Notamacropus_eugenii
ENSORLG00000019098	YTHDC2	76	88.235	ENSOPRG00000000462	YTHDC2	69	88.235	Ochotona_princeps
ENSORLG00000019098	YTHDC2	90	73.892	ENSODEG00000007804	YTHDC2	73	73.892	Octodon_degus
ENSORLG00000019098	YTHDC2	92	78.667	ENSONIG00000011601	YTHDC2	83	78.667	Oreochromis_niloticus
ENSORLG00000019098	YTHDC2	90	74.384	ENSOCUG00000012096	YTHDC2	77	74.384	Oryctolagus_cuniculus
ENSORLG00000019098	YTHDC2	99	97.879	ENSORLG00015000390	YTHDC2	93	97.879	Oryzias_latipes_hsok
ENSORLG00000019098	YTHDC2	99	78.156	ENSOMEG00000014221	YTHDC2	98	78.156	Oryzias_melastigma
ENSORLG00000019098	YTHDC2	90	73.892	ENSOGAG00000001618	YTHDC2	92	54.955	Otolemur_garnettii
ENSORLG00000019098	YTHDC2	90	73.171	ENSOARG00000016223	YTHDC2	73	73.171	Ovis_aries
ENSORLG00000019098	YTHDC2	90	73.399	ENSPPAG00000018854	YTHDC2	92	54.839	Pan_paniscus
ENSORLG00000019098	YTHDC2	90	73.892	ENSPPRG00000001595	YTHDC2	74	73.892	Panthera_pardus
ENSORLG00000019098	YTHDC2	90	73.892	ENSPTIG00000021801	YTHDC2	73	73.892	Panthera_tigris_altaica
ENSORLG00000019098	YTHDC2	90	73.399	ENSPTRG00000017143	YTHDC2	92	54.839	Pan_troglodytes
ENSORLG00000019098	YTHDC2	88	76.786	ENSPANG00000024470	YTHDC2	79	73.892	Papio_anubis
ENSORLG00000019098	YTHDC2	85	73.206	ENSPKIG00000016010	YTHDC2	80	73.206	Paramormyrops_kingsleyae
ENSORLG00000019098	YTHDC2	87	73.684	ENSPSIG00000014798	YTHDC2	77	73.684	Pelodiscus_sinensis
ENSORLG00000019098	YTHDC2	53	56.841	ENSPMGG00000020677	YTHDC2	96	56.841	Periophthalmus_magnuspinnatus
ENSORLG00000019098	YTHDC2	50	65.968	ENSPMGG00000020671	YTHDC2	98	66.290	Periophthalmus_magnuspinnatus
ENSORLG00000019098	YTHDC2	90	74.384	ENSPEMG00000018062	Ythdc2	73	74.384	Peromyscus_maniculatus_bairdii
ENSORLG00000019098	YTHDC2	90	63.592	ENSPMAG00000003218	-	93	48.947	Petromyzon_marinus
ENSORLG00000019098	YTHDC2	85	73.892	ENSPCIG00000004342	YTHDC2	96	54.914	Phascolarctos_cinereus
ENSORLG00000019098	YTHDC2	91	79.646	ENSPFOG00000003895	YTHDC2	83	79.646	Poecilia_formosa
ENSORLG00000019098	YTHDC2	91	79.646	ENSPLAG00000007558	YTHDC2	81	79.646	Poecilia_latipinna
ENSORLG00000019098	YTHDC2	91	79.372	ENSPMEG00000015205	YTHDC2	84	77.826	Poecilia_mexicana
ENSORLG00000019098	YTHDC2	91	76.087	ENSPREG00000012096	YTHDC2	80	76.087	Poecilia_reticulata
ENSORLG00000019098	YTHDC2	90	73.892	ENSPPYG00000015691	YTHDC2	73	73.892	Pongo_abelii
ENSORLG00000019098	YTHDC2	78	73.892	ENSPCAG00000007733	YTHDC2	62	73.892	Procavia_capensis
ENSORLG00000019098	YTHDC2	90	58.454	ENSPCOG00000017526	YTHDC2	94	50.523	Propithecus_coquereli
ENSORLG00000019098	YTHDC2	86	75.000	ENSPVAG00000012364	YTHDC2	80	75.000	Pteropus_vampyrus
ENSORLG00000019098	YTHDC2	84	78.125	ENSPNYG00000006908	YTHDC2	95	63.014	Pundamilia_nyererei
ENSORLG00000019098	YTHDC2	89	76.585	ENSPNAG00000010128	YTHDC2	80	76.077	Pygocentrus_nattereri
ENSORLG00000019098	YTHDC2	75	74.384	ENSRNOG00000039241	Ythdc2	92	56.218	Rattus_norvegicus
ENSORLG00000019098	YTHDC2	90	73.892	ENSRBIG00000040291	YTHDC2	73	73.892	Rhinopithecus_bieti
ENSORLG00000019098	YTHDC2	90	73.892	ENSRROG00000039477	YTHDC2	73	73.892	Rhinopithecus_roxellana
ENSORLG00000019098	YTHDC2	87	73.892	ENSSBOG00000023829	YTHDC2	92	54.989	Saimiri_boliviensis_boliviensis
ENSORLG00000019098	YTHDC2	90	73.892	ENSSHAG00000003101	YTHDC2	93	55.123	Sarcophilus_harrisii
ENSORLG00000019098	YTHDC2	90	67.873	ENSSFOG00015003572	ythdc2	80	67.873	Scleropages_formosus
ENSORLG00000019098	YTHDC2	87	57.003	ENSSMAG00000011225	YTHDC2	94	57.003	Scophthalmus_maximus
ENSORLG00000019098	YTHDC2	92	78.761	ENSSDUG00000021389	YTHDC2	81	79.091	Seriola_dumerili
ENSORLG00000019098	YTHDC2	92	78.761	ENSSLDG00000022840	YTHDC2	81	79.091	Seriola_lalandi_dorsalis
ENSORLG00000019098	YTHDC2	82	76.786	ENSSARG00000000924	YTHDC2	80	76.786	Sorex_araneus
ENSORLG00000019098	YTHDC2	53	52.314	ENSSPUG00000015912	-	96	52.162	Sphenodon_punctatus
ENSORLG00000019098	YTHDC2	92	76.444	ENSSPAG00000014889	YTHDC2	96	62.850	Stegastes_partitus
ENSORLG00000019098	YTHDC2	90	73.892	ENSSSCG00000014211	YTHDC2	80	73.892	Sus_scrofa
ENSORLG00000019098	YTHDC2	86	71.429	ENSTGUG00000003755	-	85	68.317	Taeniopygia_guttata
ENSORLG00000019098	YTHDC2	65	70.930	ENSTGUG00000014992	-	99	53.153	Taeniopygia_guttata
ENSORLG00000019098	YTHDC2	93	66.135	ENSTRUG00000006717	YTHDC2	83	66.135	Takifugu_rubripes
ENSORLG00000019098	YTHDC2	93	66.667	ENSTNIG00000003707	YTHDC2	81	70.866	Tetraodon_nigroviridis
ENSORLG00000019098	YTHDC2	83	56.017	ENSTBEG00000006872	YTHDC2	82	57.225	Tupaia_belangeri
ENSORLG00000019098	YTHDC2	81	75.000	ENSTTRG00000003116	YTHDC2	75	75.000	Tursiops_truncatus
ENSORLG00000019098	YTHDC2	67	73.892	ENSUAMG00000003688	YTHDC2	97	57.519	Ursus_americanus
ENSORLG00000019098	YTHDC2	90	74.020	ENSUMAG00000023877	YTHDC2	82	74.020	Ursus_maritimus
ENSORLG00000019098	YTHDC2	89	70.936	ENSVPAG00000007516	YTHDC2	71	71.429	Vicugna_pacos
ENSORLG00000019098	YTHDC2	90	73.892	ENSVVUG00000000281	YTHDC2	78	73.892	Vulpes_vulpes
ENSORLG00000019098	YTHDC2	85	72.932	ENSXETG00000021517	ythdc2	72	72.932	Xenopus_tropicalis
ENSORLG00000019098	YTHDC2	89	83.582	ENSXCOG00000016406	YTHDC2	80	83.582	Xiphophorus_couchianus
ENSORLG00000019098	YTHDC2	90	81.221	ENSXMAG00000007618	YTHDC2	80	81.221	Xiphophorus_maculatus