EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000019721 (Gene tree)
Gene ID: 101167419
Gene Symbol: wdhd1
Alias: -
Full Name: WD repeat and HMG-box DNA binding protein 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 37919 bases
Position: chr3:1308770-1346688
Accession: 101167419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000024510	eIF2A	PF08662.11	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000027022	-	3494	XM_011492502	ENSORLP00000030264	1110 (aa)	XP_011490804	UPI000CE1C5A8
ENSORLT00000024511	-	3105	-	ENSORLP00000024510	1034 (aa)	-	H2MZK2
ENSORLT00000032894	-	3801	-	ENSORLP00000029996	1266 (aa)	-	-

Gene Model

Click here to download ENSORLG00000019721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000019721's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000019721	wdhd1	99	56.734	ENSG00000198554	WDHD1	100	78.571	Homo_sapiens
ENSORLG00000019721	wdhd1	92	82.635	ENSAPOG00000001560	wdhd1	94	77.089	Acanthochromis_polyacanthus
ENSORLG00000019721	wdhd1	98	57.291	ENSAMEG00000014356	WDHD1	96	58.256	Ailuropoda_melanoleuca
ENSORLG00000019721	wdhd1	98	78.725	ENSACIG00000021530	wdhd1	94	79.175	Amphilophus_citrinellus
ENSORLG00000019721	wdhd1	93	82.959	ENSAOCG00000018123	wdhd1	94	72.067	Amphiprion_ocellaris
ENSORLG00000019721	wdhd1	98	74.879	ENSAPEG00000000157	wdhd1	94	75.556	Amphiprion_percula
ENSORLG00000019721	wdhd1	98	72.903	ENSATEG00000021986	wdhd1	94	72.806	Anabas_testudineus
ENSORLG00000019721	wdhd1	98	56.772	ENSACAG00000016303	WDHD1	94	56.704	Anolis_carolinensis
ENSORLG00000019721	wdhd1	94	84.104	ENSACLG00000009036	wdhd1	95	73.860	Astatotilapia_calliptera
ENSORLG00000019721	wdhd1	79	70.205	ENSAMXG00000043712	wdhd1	98	70.569	Astyanax_mexicanus
ENSORLG00000019721	wdhd1	98	56.639	ENSBTAG00000019120	WDHD1	94	57.036	Bos_taurus
ENSORLG00000019721	wdhd1	98	58.516	ENSCJAG00000018208	WDHD1	94	58.135	Callithrix_jacchus
ENSORLG00000019721	wdhd1	86	55.426	ENSCAFG00000014989	WDHD1	93	54.468	Canis_familiaris
ENSORLG00000019721	wdhd1	98	57.089	ENSCHIG00000017956	WDHD1	94	57.237	Capra_hircus
ENSORLG00000019721	wdhd1	98	57.358	ENSTSYG00000000266	WDHD1	94	57.035	Carlito_syrichta
ENSORLG00000019721	wdhd1	56	71.739	ENSCCAG00000018389	WDHD1	98	68.977	Cebus_capucinus
ENSORLG00000019721	wdhd1	98	58.238	ENSCATG00000035221	WDHD1	94	57.990	Cercocebus_atys
ENSORLG00000019721	wdhd1	61	61.695	ENSCLAG00000013863	-	99	61.417	Chinchilla_lanigera
ENSORLG00000019721	wdhd1	95	56.882	ENSCSAG00000014757	WDHD1	94	56.250	Chlorocebus_sabaeus
ENSORLG00000019721	wdhd1	98	58.318	ENSCPBG00000020071	WDHD1	94	57.836	Chrysemys_picta_bellii
ENSORLG00000019721	wdhd1	90	63.805	ENSCANG00000037721	WDHD1	94	58.207	Colobus_angolensis_palliatus
ENSORLG00000019721	wdhd1	98	65.888	ENSDARG00000015998	wdhd1	97	76.689	Danio_rerio
ENSORLG00000019721	wdhd1	98	54.537	ENSDNOG00000006661	WDHD1	94	54.163	Dasypus_novemcinctus
ENSORLG00000019721	wdhd1	98	58.111	ENSECAG00000015412	WDHD1	91	57.277	Equus_caballus
ENSORLG00000019721	wdhd1	98	72.066	ENSELUG00000015575	wdhd1	95	72.066	Esox_lucius
ENSORLG00000019721	wdhd1	98	56.903	ENSFCAG00000023408	-	94	56.767	Felis_catus
ENSORLG00000019721	wdhd1	98	57.542	ENSGALG00000012199	WDHD1	94	57.290	Gallus_gallus
ENSORLG00000019721	wdhd1	91	64.100	ENSGACG00000017321	wdhd1	89	64.900	Gasterosteus_aculeatus
ENSORLG00000019721	wdhd1	79	66.341	ENSGAGG00000010665	-	94	65.403	Gopherus_agassizii
ENSORLG00000019721	wdhd1	99	56.639	ENSGGOG00000007744	WDHD1	96	57.103	Gorilla_gorilla
ENSORLG00000019721	wdhd1	98	57.371	ENSHGLG00000015105	WDHD1	94	57.746	Heterocephalus_glaber_female
ENSORLG00000019721	wdhd1	98	57.116	ENSHGLG00100001967	WDHD1	94	57.170	Heterocephalus_glaber_male
ENSORLG00000019721	wdhd1	98	73.197	ENSHCOG00000007286	wdhd1	94	73.223	Hippocampus_comes
ENSORLG00000019721	wdhd1	98	56.554	ENSSTOG00000020300	WDHD1	94	57.008	Ictidomys_tridecemlineatus
ENSORLG00000019721	wdhd1	98	52.219	ENSJJAG00000001164	Wdhd1	94	52.652	Jaculus_jaculus
ENSORLG00000019721	wdhd1	93	81.973	ENSLBEG00000024847	wdhd1	94	72.575	Labrus_bergylta
ENSORLG00000019721	wdhd1	98	56.599	ENSLACG00000019053	WDHD1	94	57.196	Latimeria_chalumnae
ENSORLG00000019721	wdhd1	98	63.299	ENSLOCG00000012086	wdhd1	94	63.021	Lepisosteus_oculatus
ENSORLG00000019721	wdhd1	98	58.032	ENSLAFG00000005385	WDHD1	94	58.279	Loxodonta_africana
ENSORLG00000019721	wdhd1	98	57.990	ENSMFAG00000032915	WDHD1	94	57.744	Macaca_fascicularis
ENSORLG00000019721	wdhd1	98	57.736	ENSMMUG00000000302	WDHD1	94	57.210	Macaca_mulatta
ENSORLG00000019721	wdhd1	98	57.990	ENSMNEG00000032489	WDHD1	94	57.744	Macaca_nemestrina
ENSORLG00000019721	wdhd1	98	57.990	ENSMLEG00000035661	WDHD1	94	57.744	Mandrillus_leucophaeus
ENSORLG00000019721	wdhd1	98	72.356	ENSMAMG00000016742	wdhd1	94	73.452	Mastacembelus_armatus
ENSORLG00000019721	wdhd1	94	84.104	ENSMZEG00005015228	wdhd1	95	73.953	Maylandia_zebra
ENSORLG00000019721	wdhd1	98	56.583	ENSMGAG00000013676	WDHD1	94	55.929	Meleagris_gallopavo
ENSORLG00000019721	wdhd1	98	56.595	ENSMICG00000016239	WDHD1	94	56.314	Microcebus_murinus
ENSORLG00000019721	wdhd1	98	71.819	ENSMMOG00000007869	wdhd1	97	72.102	Mola_mola
ENSORLG00000019721	wdhd1	98	57.721	ENSMODG00000011703	WDHD1	94	56.752	Monodelphis_domestica
ENSORLG00000019721	wdhd1	61	59.624	MGP_CAROLIEiJ_G0019163	Wdhd1	99	58.567	Mus_caroli
ENSORLG00000019721	wdhd1	61	59.346	MGP_PahariEiJ_G0030180	Wdhd1	99	58.438	Mus_pahari
ENSORLG00000019721	wdhd1	98	54.724	ENSMPUG00000005542	WDHD1	94	53.976	Mustela_putorius_furo
ENSORLG00000019721	wdhd1	98	57.653	ENSMLUG00000010353	WDHD1	94	57.331	Myotis_lucifugus
ENSORLG00000019721	wdhd1	98	76.522	ENSNBRG00000010071	wdhd1	94	76.334	Neolamprologus_brichardi
ENSORLG00000019721	wdhd1	98	58.974	ENSNLEG00000012760	WDHD1	94	57.835	Nomascus_leucogenys
ENSORLG00000019721	wdhd1	83	49.268	ENSMEUG00000006706	WDHD1	81	50.000	Notamacropus_eugenii
ENSORLG00000019721	wdhd1	98	83.412	ENSONIG00000007084	wdhd1	94	75.189	Oreochromis_niloticus
ENSORLG00000019721	wdhd1	98	57.250	ENSOCUG00000004987	WDHD1	94	56.942	Oryctolagus_cuniculus
ENSORLG00000019721	wdhd1	98	90.551	ENSORLG00020007040	wdhd1	95	90.650	Oryzias_latipes_hni
ENSORLG00000019721	wdhd1	98	89.184	ENSORLG00015008848	wdhd1	95	89.184	Oryzias_latipes_hsok
ENSORLG00000019721	wdhd1	98	56.890	ENSOGAG00000003465	WDHD1	94	56.104	Otolemur_garnettii
ENSORLG00000019721	wdhd1	98	57.129	ENSOARG00000021081	WDHD1	94	57.411	Ovis_aries
ENSORLG00000019721	wdhd1	99	56.186	ENSPPAG00000035486	WDHD1	96	56.372	Pan_paniscus
ENSORLG00000019721	wdhd1	98	57.183	ENSPPRG00000007679	WDHD1	94	56.955	Panthera_pardus
ENSORLG00000019721	wdhd1	98	57.090	ENSPTIG00000013608	WDHD1	94	56.861	Panthera_tigris_altaica
ENSORLG00000019721	wdhd1	99	56.732	ENSPTRG00000006366	WDHD1	96	57.103	Pan_troglodytes
ENSORLG00000019721	wdhd1	98	57.439	ENSPANG00000017506	WDHD1	94	57.616	Papio_anubis
ENSORLG00000019721	wdhd1	98	60.980	ENSPKIG00000004863	wdhd1	74	68.575	Paramormyrops_kingsleyae
ENSORLG00000019721	wdhd1	98	56.127	ENSPSIG00000011635	WDHD1	96	58.230	Pelodiscus_sinensis
ENSORLG00000019721	wdhd1	98	56.861	ENSPPYG00000005834	WDHD1	94	56.874	Pongo_abelii
ENSORLG00000019721	wdhd1	98	52.892	ENSPVAG00000016064	WDHD1	94	52.394	Pteropus_vampyrus
ENSORLG00000019721	wdhd1	98	72.798	ENSPNYG00000019115	wdhd1	94	89.967	Pundamilia_nyererei
ENSORLG00000019721	wdhd1	98	64.690	ENSPNAG00000013823	wdhd1	95	65.270	Pygocentrus_nattereri
ENSORLG00000019721	wdhd1	98	56.567	ENSRNOG00000011167	Wdhd1	94	56.968	Rattus_norvegicus
ENSORLG00000019721	wdhd1	98	57.900	ENSRROG00000006993	WDHD1	94	57.495	Rhinopithecus_roxellana
ENSORLG00000019721	wdhd1	98	54.520	ENSSBOG00000034847	WDHD1	94	54.563	Saimiri_boliviensis_boliviensis
ENSORLG00000019721	wdhd1	95	55.620	ENSSHAG00000013551	WDHD1	94	53.757	Sarcophilus_harrisii
ENSORLG00000019721	wdhd1	98	64.878	ENSSFOG00015009950	wdhd1	95	63.838	Scleropages_formosus
ENSORLG00000019721	wdhd1	94	81.087	ENSSMAG00000007346	wdhd1	94	72.037	Scophthalmus_maximus
ENSORLG00000019721	wdhd1	98	71.347	ENSSDUG00000016996	wdhd1	94	70.897	Seriola_dumerili
ENSORLG00000019721	wdhd1	98	75.371	ENSSLDG00000021689	wdhd1	95	88.235	Seriola_lalandi_dorsalis
ENSORLG00000019721	wdhd1	92	65.652	ENSSSCG00000005052	WDHD1	94	57.692	Sus_scrofa
ENSORLG00000019721	wdhd1	98	72.270	ENSTNIG00000018803	wdhd1	94	72.175	Tetraodon_nigroviridis
ENSORLG00000019721	wdhd1	90	58.554	ENSTTRG00000003314	WDHD1	90	58.854	Tursiops_truncatus
ENSORLG00000019721	wdhd1	66	64.006	ENSUAMG00000015360	-	96	62.990	Ursus_americanus
ENSORLG00000019721	wdhd1	98	57.717	ENSUMAG00000015946	WDHD1	94	57.331	Ursus_maritimus
ENSORLG00000019721	wdhd1	92	64.878	ENSVPAG00000008394	WDHD1	94	57.089	Vicugna_pacos
ENSORLG00000019721	wdhd1	98	58.270	ENSVVUG00000029613	WDHD1	94	57.225	Vulpes_vulpes
ENSORLG00000019721	wdhd1	98	56.456	ENSXETG00000012210	wdhd1	94	55.985	Xenopus_tropicalis