EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000019978 (Gene tree)
Gene ID
101173434
Gene Symbol
-
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Plus strand
Length
27610 bases
Position
chr9:21418715-21446324
Accession
101173434
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000031972RRM_1PF00076.228.3e-3312
ENSORLP00000031972RRM_1PF00076.228.3e-3322
ENSORLP00000024802RRM_1PF00076.223.9e-2812
ENSORLP00000024802RRM_1PF00076.223.9e-2822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000024803-963-ENSORLP00000024802320 (aa)-H2N0A5
ENSORLT00000035930-3139XM_023958661ENSORLP00000031972349 (aa)XP_023814429UPI0009D98E04
Gene Model
Click here to download ENSORLG00000019978's gene model file
Pathways
Pathway IDPathway NameSource
ola03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000019978's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000019978-6130.682ENSORLG00000025332-8130.682
ENSORLG00000019978-5434.756ENSORLG00000026571-9535.955
ENSORLG00000019978-5732.447ENSORLG00000023542-6432.275
ENSORLG00000019978-5332.353ENSORLG00000003593tardbp5534.940
ENSORLG00000019978-6130.682ENSORLG00000025015-8130.682
ENSORLG00000019978-5739.216ENSORLG00000017561hnrnpa37035.294
ENSORLG00000019978-8035.644ENSORLG00000029240-9835.644
ENSORLG00000019978-5444.920ENSORLG00000005327hnrnpaba8638.326
ENSORLG00000019978-5236.207ENSORLG00000027074-8036.207
ENSORLG00000019978-5743.719ENSORLG00000001833hnrnpd7446.988
ENSORLG00000019978-10072.050ENSORLG00000009671msi2a10072.050
ENSORLG00000019978-5633.684ENSORLG00000023176-6133.684
ENSORLG00000019978-5835.294ENSORLG00000005188tardbpl5238.129
ENSORLG00000019978-5534.197ENSORLG00000024157-6534.682
ENSORLG00000019978-10090.883ENSORLG00000029593MSI110090.883
ENSORLG00000019978-6131.818ENSORLG00000030284-8131.818
ENSORLG00000019978-5141.209ENSORLG00000008001-5740.860
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000019978-10084.530ENSG00000135097MSI19987.931Homo_sapiens
ENSORLG00000019978-10092.023ENSAPOG00000003191MSI110092.023Acanthochromis_polyacanthus
ENSORLG00000019978-10098.567ENSAPOG00000023458-10098.567Acanthochromis_polyacanthus
ENSORLG00000019978-9371.271ENSAMEG00000013302MSI110071.271Ailuropoda_melanoleuca
ENSORLG00000019978-8993.706ENSACIG00000017754-7890.203Amphilophus_citrinellus
ENSORLG00000019978-10092.023ENSAOCG00000003804MSI110092.023Amphiprion_ocellaris
ENSORLG00000019978-9392.642ENSAOCG00000009031-9592.642Amphiprion_ocellaris
ENSORLG00000019978-10092.023ENSAPEG00000003245MSI110092.023Amphiprion_percula
ENSORLG00000019978-10098.567ENSAPEG00000006857-8498.567Amphiprion_percula
ENSORLG00000019978-10095.211ENSATEG00000017059MSI110095.211Anabas_testudineus
ENSORLG00000019978-10083.944ENSATEG00000023779-10083.944Anabas_testudineus
ENSORLG00000019978-10085.596ENSACAG00000002762MSI110085.319Anolis_carolinensis
ENSORLG00000019978-10084.530ENSANAG00000027151MSI110084.530Aotus_nancymaae
ENSORLG00000019978-8284.965ENSANAG00000027901-8884.965Aotus_nancymaae
ENSORLG00000019978-10099.140ENSACLG00000000117-10099.390Astatotilapia_calliptera
ENSORLG00000019978-10092.593ENSACLG00000011230MSI110092.593Astatotilapia_calliptera
ENSORLG00000019978-9493.730ENSAMXG00000038960msi17693.730Astyanax_mexicanus
ENSORLG00000019978-10084.530ENSBTAG00000009800MSI110086.774Bos_taurus
ENSORLG00000019978-10084.530ENSCJAG00000008578MSI110084.530Callithrix_jacchus
ENSORLG00000019978-10084.254ENSCAFG00000010283MSI110084.254Canis_familiaris
ENSORLG00000019978-9486.174ENSCAFG00020020585MSI110086.174Canis_lupus_dingo
ENSORLG00000019978-10082.289ENSCHIG00000024304MSI110082.289Capra_hircus
ENSORLG00000019978-9485.321ENSTSYG00000033949MSI19585.321Carlito_syrichta
ENSORLG00000019978-9476.997ENSCAPG00000003919MSI18976.997Cavia_aperea
ENSORLG00000019978-9585.756ENSCPOG00000012361MSI110085.965Cavia_porcellus
ENSORLG00000019978-10084.530ENSCCAG00000035567MSI110084.530Cebus_capucinus
ENSORLG00000019978-10084.530ENSCATG00000030019MSI110084.530Cercocebus_atys
ENSORLG00000019978-9485.965ENSCLAG00000011329MSI110085.965Chinchilla_lanigera
ENSORLG00000019978-7884.477ENSCSAG00000002265MSI19684.477Chlorocebus_sabaeus
ENSORLG00000019978-10088.034ENSCPBG00000011349MSI110088.034Chrysemys_picta_bellii
ENSORLG00000019978-9485.366ENSCANG00000040651MSI110085.366Colobus_angolensis_palliatus
ENSORLG00000019978-10084.530ENSCGRG00001018883Msi110084.530Cricetulus_griseus_chok1gshd
ENSORLG00000019978-9485.410ENSCGRG00000002191Msi17285.410Cricetulus_griseus_crigri
ENSORLG00000019978-9394.276ENSCSEG00000011032MSI110094.276Cynoglossus_semilaevis
ENSORLG00000019978-10097.421ENSCSEG00000008352-10097.421Cynoglossus_semilaevis
ENSORLG00000019978-10091.168ENSCSEG00000005834-10091.168Cynoglossus_semilaevis
ENSORLG00000019978-10098.854ENSCVAG00000009100MSI110098.854Cyprinodon_variegatus
ENSORLG00000019978-6274.312ENSCVAG00000017463-8974.312Cyprinodon_variegatus
ENSORLG00000019978-5165.672ENSCVAG00000017430zgc:1107969465.672Cyprinodon_variegatus
ENSORLG00000019978-7992.130ENSDARG00000102015CABZ01037298.19892.130Danio_rerio
ENSORLG00000019978-9394.932ENSDARG00000010710msi110095.327Danio_rerio
ENSORLG00000019978-9482.911ENSDNOG00000005713MSI19182.911Dasypus_novemcinctus
ENSORLG00000019978-9484.731ENSDORG00000005610Msi19484.731Dipodomys_ordii
ENSORLG00000019978-9482.012ENSETEG00000004756MSI110082.012Echinops_telfairi
ENSORLG00000019978-10084.530ENSEASG00005004736MSI19886.774Equus_asinus_asinus
ENSORLG00000019978-10084.530ENSECAG00000017526MSI110084.530Equus_caballus
ENSORLG00000019978-9490.544ENSELUG00000023219MSI19290.544Esox_lucius
ENSORLG00000019978-9487.195ENSELUG00000023280-10086.890Esox_lucius
ENSORLG00000019978-10084.530ENSFCAG00000011007MSI110084.530Felis_catus
ENSORLG00000019978-9490.000ENSFALG00000007574MSI110090.000Ficedula_albicollis
ENSORLG00000019978-9485.061ENSFDAG00000019586MSI110085.061Fukomys_damarensis
ENSORLG00000019978-10098.854ENSFHEG00000022446MSI110098.854Fundulus_heteroclitus
ENSORLG00000019978-10092.023ENSFHEG00000003560-10092.023Fundulus_heteroclitus
ENSORLG00000019978-10082.817ENSGMOG00000017838-10082.817Gadus_morhua
ENSORLG00000019978-10095.702ENSGMOG00000001006MSI19995.702Gadus_morhua
ENSORLG00000019978-9489.313ENSGALG00000007227MSI19876.471Gallus_gallus
ENSORLG00000019978-10076.877ENSGAFG00000005860-10076.877Gambusia_affinis
ENSORLG00000019978-9492.097ENSGAFG00000021522MSI19492.097Gambusia_affinis
ENSORLG00000019978-10097.421ENSGACG00000012679MSI110097.421Gasterosteus_aculeatus
ENSORLG00000019978-10084.488ENSGACG00000008674-10084.488Gasterosteus_aculeatus
ENSORLG00000019978-10088.034ENSGAGG00000016037MSI110088.034Gopherus_agassizii
ENSORLG00000019978-9485.987ENSGGOG00000010328MSI110085.987Gorilla_gorilla
ENSORLG00000019978-10092.593ENSHBUG00000021921MSI110092.593Haplochromis_burtoni
ENSORLG00000019978-10099.140ENSHBUG00000011841-10099.140Haplochromis_burtoni
ENSORLG00000019978-10084.254ENSHGLG00000012782MSI110084.254Heterocephalus_glaber_female
ENSORLG00000019978-9485.061ENSHGLG00100016848MSI110085.061Heterocephalus_glaber_male
ENSORLG00000019978-9390.572ENSHCOG00000012019MSI110090.572Hippocampus_comes
ENSORLG00000019978-10091.785ENSHCOG00000012067-10091.785Hippocampus_comes
ENSORLG00000019978-10091.977ENSIPUG00000001976msi110091.977Ictalurus_punctatus
ENSORLG00000019978-9486.174ENSSTOG00000009799MSI110086.174Ictidomys_tridecemlineatus
ENSORLG00000019978-10072.928ENSJJAG00000010643-10072.222Jaculus_jaculus
ENSORLG00000019978-10084.530ENSJJAG00000010463Msi110084.530Jaculus_jaculus
ENSORLG00000019978-9391.919ENSKMAG00000019877-10091.919Kryptolebias_marmoratus
ENSORLG00000019978-10097.421ENSKMAG00000011251MSI110097.421Kryptolebias_marmoratus
ENSORLG00000019978-10098.567ENSLBEG00000008789MSI110098.567Labrus_bergylta
ENSORLG00000019978-10092.023ENSLBEG00000001375-10092.023Labrus_bergylta
ENSORLG00000019978-9484.795ENSLACG00000018287MSI110084.795Latimeria_chalumnae
ENSORLG00000019978-5279.091ENSLOCG00000008618zgc:1107967179.091Lepisosteus_oculatus
ENSORLG00000019978-9377.049ENSLAFG00000009412MSI110077.049Loxodonta_africana
ENSORLG00000019978-9485.965ENSMFAG00000001798MSI110085.965Macaca_fascicularis
ENSORLG00000019978-9485.965ENSMMUG00000031527MSI19785.057Macaca_mulatta
ENSORLG00000019978-10084.530ENSMNEG00000040034MSI19886.774Macaca_nemestrina
ENSORLG00000019978-9485.366ENSMLEG00000003921MSI110085.366Mandrillus_leucophaeus
ENSORLG00000019978-10098.281ENSMAMG00000002279MSI110098.281Mastacembelus_armatus
ENSORLG00000019978-10091.453ENSMAMG00000018426-10091.453Mastacembelus_armatus
ENSORLG00000019978-10092.593ENSMZEG00005026892MSI110092.593Maylandia_zebra
ENSORLG00000019978-10099.140ENSMZEG00005000340-10099.140Maylandia_zebra
ENSORLG00000019978-6594.675ENSMGAG00000016518-10094.675Meleagris_gallopavo
ENSORLG00000019978-7089.712ENSMAUG00000016820Msi110089.712Mesocricetus_auratus
ENSORLG00000019978-10084.530ENSMICG00000033181MSI110084.530Microcebus_murinus
ENSORLG00000019978-10084.254ENSMOCG00000002286Msi110084.254Microtus_ochrogaster
ENSORLG00000019978-9391.246ENSMMOG00000010492MSI19691.246Mola_mola
ENSORLG00000019978-10088.750ENSMMOG00000012265-10088.750Mola_mola
ENSORLG00000019978-9357.229ENSMODG00000003189-10058.434Monodelphis_domestica
ENSORLG00000019978-10098.854ENSMALG00000017889MSI110098.854Monopterus_albus
ENSORLG00000019978-9492.378ENSMALG00000001426-10092.378Monopterus_albus
ENSORLG00000019978-10083.978MGP_CAROLIEiJ_G0027626Msi19889.354Mus_caroli
ENSORLG00000019978-10083.978ENSMUSG00000054256Msi19889.354Mus_musculus
ENSORLG00000019978-10086.325MGP_PahariEiJ_G0024206Msi19888.973Mus_pahari
ENSORLG00000019978-10083.978MGP_SPRETEiJ_G0028624Msi19889.354Mus_spretus
ENSORLG00000019978-9486.174ENSMPUG00000003168MSI110086.174Mustela_putorius_furo
ENSORLG00000019978-9476.786ENSMLUG00000010313MSI110076.786Myotis_lucifugus
ENSORLG00000019978-9485.410ENSNGAG00000014508Msi19185.410Nannospalax_galili
ENSORLG00000019978-10099.140ENSNBRG00000000841-10099.140Neolamprologus_brichardi
ENSORLG00000019978-8985.246ENSNBRG00000018012MSI19985.246Neolamprologus_brichardi
ENSORLG00000019978-9075.915ENSNLEG00000015636MSI110075.915Nomascus_leucogenys
ENSORLG00000019978-9465.244ENSMEUG00000015759MSI110065.244Notamacropus_eugenii
ENSORLG00000019978-9178.413ENSOPRG00000016879MSI110078.413Ochotona_princeps
ENSORLG00000019978-9485.366ENSODEG00000006328MSI110085.366Octodon_degus
ENSORLG00000019978-10099.140ENSONIG00000011182MSI110099.140Oreochromis_niloticus
ENSORLG00000019978-10089.286ENSONIG00000019452-10089.286Oreochromis_niloticus
ENSORLG00000019978-9486.174ENSOCUG00000027716MSI110086.174Oryctolagus_cuniculus
ENSORLG00000019978-10090.883ENSORLG00020008266MSI19991.919Oryzias_latipes_hni
ENSORLG00000019978-100100.000ENSORLG00020001208-71100.000Oryzias_latipes_hni
ENSORLG00000019978-100100.000ENSORLG00015013672-71100.000Oryzias_latipes_hsok
ENSORLG00000019978-10090.883ENSORLG00015003916MSI19991.919Oryzias_latipes_hsok
ENSORLG00000019978-10099.713ENSOMEG00000017536MSI110099.713Oryzias_melastigma
ENSORLG00000019978-10091.168ENSOMEG00000002272-10091.168Oryzias_melastigma
ENSORLG00000019978-9982.143ENSOGAG00000003847MSI19982.143Otolemur_garnettii
ENSORLG00000019978-9482.424ENSOARG00000012097MSI110082.424Ovis_aries
ENSORLG00000019978-9485.366ENSPPAG00000043073MSI110085.366Pan_paniscus
ENSORLG00000019978-10084.530ENSPPRG00000000370MSI110084.530Panthera_pardus
ENSORLG00000019978-9486.174ENSPTIG00000008913MSI110086.174Panthera_tigris_altaica
ENSORLG00000019978-10084.530ENSPTRG00000005531MSI110084.530Pan_troglodytes
ENSORLG00000019978-10084.254ENSPANG00000006335MSI110084.254Papio_anubis
ENSORLG00000019978-10093.123ENSPKIG00000023575-10093.123Paramormyrops_kingsleyae
ENSORLG00000019978-10093.123ENSPKIG00000016497MSI110093.123Paramormyrops_kingsleyae
ENSORLG00000019978-9486.018ENSPSIG00000011608-9386.018Pelodiscus_sinensis
ENSORLG00000019978-7980.786ENSPSIG00000009621-10080.786Pelodiscus_sinensis
ENSORLG00000019978-9474.622ENSPMGG00000007743-9868.857Periophthalmus_magnuspinnatus
ENSORLG00000019978-8999.296ENSPMGG00000000514MSI19799.296Periophthalmus_magnuspinnatus
ENSORLG00000019978-9483.976ENSPEMG00000010491Msi19583.976Peromyscus_maniculatus_bairdii
ENSORLG00000019978-10099.427ENSPFOG00000013113MSI110099.427Poecilia_formosa
ENSORLG00000019978-10091.453ENSPFOG00000008319-8691.453Poecilia_formosa
ENSORLG00000019978-10099.427ENSPLAG00000014025-10099.427Poecilia_latipinna
ENSORLG00000019978-10091.453ENSPLAG00000012431-9791.453Poecilia_latipinna
ENSORLG00000019978-10099.427ENSPMEG00000012796MSI110099.427Poecilia_mexicana
ENSORLG00000019978-10090.883ENSPMEG00000007025-9385.000Poecilia_mexicana
ENSORLG00000019978-9393.266ENSPREG00000021416-9493.266Poecilia_reticulata
ENSORLG00000019978-7895.050ENSPREG00000014574-10095.050Poecilia_reticulata
ENSORLG00000019978-10083.702ENSPPYG00000005027MSI110083.702Pongo_abelii
ENSORLG00000019978-7690.355ENSPCAG00000002300MSI17290.355Procavia_capensis
ENSORLG00000019978-10084.530ENSPCOG00000017341MSI110084.530Propithecus_coquereli
ENSORLG00000019978-9469.817ENSPVAG00000002225MSI110069.817Pteropus_vampyrus
ENSORLG00000019978-10099.140ENSPNYG00000002529-10099.140Pundamilia_nyererei
ENSORLG00000019978-10092.593ENSPNYG00000004379MSI110092.593Pundamilia_nyererei
ENSORLG00000019978-10093.123ENSPNAG00000019337msi110093.123Pygocentrus_nattereri
ENSORLG00000019978-9485.852ENSRNOG00000001156Msi110085.852Rattus_norvegicus
ENSORLG00000019978-9486.174ENSRBIG00000036889MSI110086.174Rhinopithecus_bieti
ENSORLG00000019978-9485.152ENSRROG00000041076MSI19385.152Rhinopithecus_roxellana
ENSORLG00000019978-9485.965ENSSBOG00000030259MSI19985.965Saimiri_boliviensis_boliviensis
ENSORLG00000019978-9476.144ENSSHAG00000006834MSI110076.144Sarcophilus_harrisii
ENSORLG00000019978-9494.225ENSSFOG00015014964-9594.225Scleropages_formosus
ENSORLG00000019978-9494.260ENSSFOG00015005350MSI110094.276Scleropages_formosus
ENSORLG00000019978-10094.062ENSSMAG00000018824MSI110094.062Scophthalmus_maximus
ENSORLG00000019978-9492.748ENSSMAG00000009156-7391.133Scophthalmus_maximus
ENSORLG00000019978-10099.140ENSSDUG00000001027MSI110099.140Seriola_dumerili
ENSORLG00000019978-10092.308ENSSDUG00000022697-10092.308Seriola_dumerili
ENSORLG00000019978-10084.985ENSSLDG00000018706-10084.985Seriola_lalandi_dorsalis
ENSORLG00000019978-10099.140ENSSLDG00000016832MSI110099.140Seriola_lalandi_dorsalis
ENSORLG00000019978-10087.749ENSSPUG00000015741MSI110087.749Sphenodon_punctatus
ENSORLG00000019978-9493.598ENSSPAG00000013098-10093.598Stegastes_partitus
ENSORLG00000019978-5484.375ENSSPAG00000015573zgc:1107968284.375Stegastes_partitus
ENSORLG00000019978-7888.542ENSSPAG00000014085-10088.542Stegastes_partitus
ENSORLG00000019978-10084.254ENSSSCG00000029365MSI110085.852Sus_scrofa
ENSORLG00000019978-9487.059ENSTGUG00000009534MSI110087.059Taeniopygia_guttata
ENSORLG00000019978-8987.402ENSTRUG00000016249MSI110087.402Takifugu_rubripes
ENSORLG00000019978-9385.619ENSTRUG00000015636-7985.619Takifugu_rubripes
ENSORLG00000019978-5090.722ENSTRUG00000021586-9990.722Takifugu_rubripes
ENSORLG00000019978-9962.571ENSTNIG00000019814-9962.571Tetraodon_nigroviridis
ENSORLG00000019978-10093.750ENSTNIG00000011469MSI110093.750Tetraodon_nigroviridis
ENSORLG00000019978-9475.458ENSTBEG00000007182MSI110075.458Tupaia_belangeri
ENSORLG00000019978-7689.850ENSTTRG00000005663MSI17889.850Tursiops_truncatus
ENSORLG00000019978-7485.780ENSUAMG00000015514MSI19488.426Ursus_americanus
ENSORLG00000019978-9383.557ENSUMAG00000006176MSI18883.557Ursus_maritimus
ENSORLG00000019978-9485.410ENSVVUG00000020993MSI110084.685Vulpes_vulpes
ENSORLG00000019978-10085.673ENSXETG00000012216msi110086.246Xenopus_tropicalis
ENSORLG00000019978-9378.788ENSXCOG00000017605MSI18978.788Xiphophorus_couchianus
ENSORLG00000019978-10098.854ENSXMAG00000027103MSI110088.889Xiphophorus_maculatus
ENSORLG00000019978-10091.168ENSXMAG00000018237-10091.168Xiphophorus_maculatus

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