EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000020011 (Gene tree)
Gene ID: 101167103
Gene Symbol: trub2
Alias: -
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 6052 bases
Position: chr5:527689-533740
Accession: 101167103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000024841	TruB_N	PF01509.18	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000024842	-	996	XM_011494602	ENSORLP00000024841	331 (aa)	XP_011492904	H2N0D8

Gene Model

Click here to download ENSORLG00000020011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000020011's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000020011	trub2	84	55.000	ENSG00000167112	TRUB2	84	55.000	Homo_sapiens
ENSORLG00000020011	trub2	71	72.727	ENSAPOG00000015733	trub2	87	72.727	Acanthochromis_polyacanthus
ENSORLG00000020011	trub2	96	54.268	ENSAPOG00000018284	-	94	68.391	Acanthochromis_polyacanthus
ENSORLG00000020011	trub2	88	54.237	ENSAMEG00000015395	TRUB2	89	53.559	Ailuropoda_melanoleuca
ENSORLG00000020011	trub2	88	74.570	ENSACIG00000016500	trub2	98	68.902	Amphilophus_citrinellus
ENSORLG00000020011	trub2	96	70.031	ENSAOCG00000002330	trub2	95	70.031	Amphiprion_ocellaris
ENSORLG00000020011	trub2	96	70.732	ENSAPEG00000013177	trub2	95	70.732	Amphiprion_percula
ENSORLG00000020011	trub2	89	73.311	ENSATEG00000011371	trub2	92	73.311	Anabas_testudineus
ENSORLG00000020011	trub2	86	50.000	ENSAPLG00000009254	TRUB2	94	50.347	Anas_platyrhynchos
ENSORLG00000020011	trub2	83	52.158	ENSACAG00000007331	TRUB2	84	52.330	Anolis_carolinensis
ENSORLG00000020011	trub2	84	56.071	ENSANAG00000036234	TRUB2	90	56.071	Aotus_nancymaae
ENSORLG00000020011	trub2	96	67.378	ENSACLG00000010793	trub2	98	67.378	Astatotilapia_calliptera
ENSORLG00000020011	trub2	94	59.807	ENSAMXG00000031679	trub2	88	59.807	Astyanax_mexicanus
ENSORLG00000020011	trub2	84	55.357	ENSCJAG00000020009	TRUB2	84	55.357	Callithrix_jacchus
ENSORLG00000020011	trub2	97	49.536	ENSCAFG00000020068	TRUB2	98	48.916	Canis_familiaris
ENSORLG00000020011	trub2	52	51.724	ENSCAFG00020017325	-	97	50.575	Canis_lupus_dingo
ENSORLG00000020011	trub2	88	51.525	ENSCHIG00000021160	TRUB2	89	50.847	Capra_hircus
ENSORLG00000020011	trub2	88	53.559	ENSTSYG00000034163	TRUB2	89	52.881	Carlito_syrichta
ENSORLG00000020011	trub2	79	51.321	ENSCAPG00000000223	TRUB2	89	51.321	Cavia_aperea
ENSORLG00000020011	trub2	89	53.020	ENSCPOG00000013535	TRUB2	89	53.020	Cavia_porcellus
ENSORLG00000020011	trub2	84	51.986	ENSCCAG00000028463	-	84	51.986	Cebus_capucinus
ENSORLG00000020011	trub2	84	55.000	ENSCCAG00000026531	-	85	55.000	Cebus_capucinus
ENSORLG00000020011	trub2	84	55.714	ENSCATG00000038234	TRUB2	84	55.714	Cercocebus_atys
ENSORLG00000020011	trub2	89	53.020	ENSCLAG00000001702	TRUB2	91	53.020	Chinchilla_lanigera
ENSORLG00000020011	trub2	84	52.113	ENSCSAG00000014117	TRUB2	84	52.113	Chlorocebus_sabaeus
ENSORLG00000020011	trub2	88	51.525	ENSCHOG00000001555	TRUB2	89	50.847	Choloepus_hoffmanni
ENSORLG00000020011	trub2	86	54.035	ENSCPBG00000025186	TRUB2	84	54.035	Chrysemys_picta_bellii
ENSORLG00000020011	trub2	84	32.746	ENSCSAVG00000003930	-	87	32.746	Ciona_savignyi
ENSORLG00000020011	trub2	84	49.643	ENSCANG00000016135	TRUB2	88	47.811	Colobus_angolensis_palliatus
ENSORLG00000020011	trub2	89	50.842	ENSCGRG00001024441	Trub2	91	49.123	Cricetulus_griseus_chok1gshd
ENSORLG00000020011	trub2	89	50.842	ENSCGRG00000005633	Trub2	89	50.842	Cricetulus_griseus_crigri
ENSORLG00000020011	trub2	98	61.774	ENSCSEG00000001331	trub2	97	61.162	Cynoglossus_semilaevis
ENSORLG00000020011	trub2	92	72.168	ENSCVAG00000009901	trub2	92	70.684	Cyprinodon_variegatus
ENSORLG00000020011	trub2	92	60.656	ENSDARG00000028379	trub2	85	60.912	Danio_rerio
ENSORLG00000020011	trub2	84	53.763	ENSDNOG00000045679	-	89	51.186	Dasypus_novemcinctus
ENSORLG00000020011	trub2	77	36.015	ENSDNOG00000043967	-	78	35.632	Dasypus_novemcinctus
ENSORLG00000020011	trub2	93	50.804	ENSDORG00000016222	Trub2	96	51.148	Dipodomys_ordii
ENSORLG00000020011	trub2	89	31.757	FBgn0033060	CG7849	93	31.757	Drosophila_melanogaster
ENSORLG00000020011	trub2	84	52.857	ENSETEG00000009114	TRUB2	86	52.857	Echinops_telfairi
ENSORLG00000020011	trub2	63	43.750	ENSEBUG00000015723	trub2	77	43.750	Eptatretus_burgeri
ENSORLG00000020011	trub2	88	53.220	ENSEASG00005016819	TRUB2	89	52.542	Equus_asinus_asinus
ENSORLG00000020011	trub2	88	53.220	ENSECAG00000023520	TRUB2	89	53.220	Equus_caballus
ENSORLG00000020011	trub2	84	53.214	ENSEEUG00000008908	TRUB2	85	53.214	Erinaceus_europaeus
ENSORLG00000020011	trub2	91	64.650	ENSELUG00000002376	trub2	97	64.013	Esox_lucius
ENSORLG00000020011	trub2	84	56.071	ENSFCAG00000005839	TRUB2	87	56.071	Felis_catus
ENSORLG00000020011	trub2	77	53.906	ENSFALG00000001364	TRUB2	82	52.734	Ficedula_albicollis
ENSORLG00000020011	trub2	84	53.571	ENSFDAG00000021374	TRUB2	90	51.678	Fukomys_damarensis
ENSORLG00000020011	trub2	95	65.123	ENSFHEG00000014655	trub2	95	65.123	Fundulus_heteroclitus
ENSORLG00000020011	trub2	89	58.108	ENSGMOG00000000981	trub2	99	58.108	Gadus_morhua
ENSORLG00000020011	trub2	85	52.113	ENSGALG00000004920	TRUB2	69	51.049	Gallus_gallus
ENSORLG00000020011	trub2	95	70.679	ENSGAFG00000010107	trub2	96	70.679	Gambusia_affinis
ENSORLG00000020011	trub2	91	72.903	ENSGACG00000001476	trub2	93	72.903	Gasterosteus_aculeatus
ENSORLG00000020011	trub2	84	53.929	ENSGAGG00000022872	TRUB2	93	50.000	Gopherus_agassizii
ENSORLG00000020011	trub2	84	54.643	ENSGGOG00000014780	TRUB2	84	54.643	Gorilla_gorilla
ENSORLG00000020011	trub2	96	67.683	ENSHBUG00000022384	trub2	98	67.683	Haplochromis_burtoni
ENSORLG00000020011	trub2	88	51.525	ENSHGLG00000016715	TRUB2	89	51.525	Heterocephalus_glaber_female
ENSORLG00000020011	trub2	88	51.525	ENSHGLG00100016548	TRUB2	89	51.525	Heterocephalus_glaber_male
ENSORLG00000020011	trub2	99	66.565	ENSHCOG00000017748	trub2	98	66.565	Hippocampus_comes
ENSORLG00000020011	trub2	89	59.259	ENSIPUG00000017725	hdhd3	51	59.259	Ictalurus_punctatus
ENSORLG00000020011	trub2	95	49.375	ENSSTOG00000022617	-	97	48.750	Ictidomys_tridecemlineatus
ENSORLG00000020011	trub2	84	52.857	ENSSTOG00000008024	-	96	47.812	Ictidomys_tridecemlineatus
ENSORLG00000020011	trub2	84	47.857	ENSJJAG00000019181	Trub2	83	47.857	Jaculus_jaculus
ENSORLG00000020011	trub2	91	76.667	ENSKMAG00000007861	trub2	89	76.667	Kryptolebias_marmoratus
ENSORLG00000020011	trub2	90	69.667	ENSLBEG00000000907	trub2	88	69.667	Labrus_bergylta
ENSORLG00000020011	trub2	84	56.429	ENSLACG00000001515	TRUB2	83	56.184	Latimeria_chalumnae
ENSORLG00000020011	trub2	84	60.000	ENSLOCG00000000885	trub2	92	60.000	Lepisosteus_oculatus
ENSORLG00000020011	trub2	88	52.542	ENSLAFG00000002174	TRUB2	97	52.542	Loxodonta_africana
ENSORLG00000020011	trub2	84	55.357	ENSMFAG00000000881	TRUB2	84	55.357	Macaca_fascicularis
ENSORLG00000020011	trub2	84	55.357	ENSMMUG00000014146	TRUB2	98	49.541	Macaca_mulatta
ENSORLG00000020011	trub2	84	55.357	ENSMNEG00000011189	TRUB2	84	55.357	Macaca_nemestrina
ENSORLG00000020011	trub2	84	55.357	ENSMLEG00000037270	TRUB2	84	55.357	Mandrillus_leucophaeus
ENSORLG00000020011	trub2	90	71.812	ENSMAMG00000023643	trub2	98	71.812	Mastacembelus_armatus
ENSORLG00000020011	trub2	96	67.683	ENSMZEG00005016018	trub2	98	67.683	Maylandia_zebra
ENSORLG00000020011	trub2	58	55.440	ENSMGAG00000003894	TRUB2	97	55.440	Meleagris_gallopavo
ENSORLG00000020011	trub2	84	53.214	ENSMAUG00000010403	Trub2	88	50.292	Mesocricetus_auratus
ENSORLG00000020011	trub2	85	54.093	ENSMICG00000047032	TRUB2	85	53.381	Microcebus_murinus
ENSORLG00000020011	trub2	84	53.214	ENSMOCG00000014291	Trub2	92	53.214	Microtus_ochrogaster
ENSORLG00000020011	trub2	96	69.688	ENSMMOG00000021674	trub2	96	70.570	Mola_mola
ENSORLG00000020011	trub2	84	51.971	ENSMODG00000005940	TRUB2	94	51.254	Monodelphis_domestica
ENSORLG00000020011	trub2	97	68.210	ENSMALG00000021231	trub2	95	68.210	Monopterus_albus
ENSORLG00000020011	trub2	84	51.786	MGP_CAROLIEiJ_G0023368	Trub2	88	48.538	Mus_caroli
ENSORLG00000020011	trub2	84	51.786	ENSMUSG00000039826	Trub2	88	48.538	Mus_musculus
ENSORLG00000020011	trub2	84	52.143	MGP_PahariEiJ_G0024826	Trub2	88	49.123	Mus_pahari
ENSORLG00000020011	trub2	84	51.786	MGP_SPRETEiJ_G0024286	Trub2	88	48.538	Mus_spretus
ENSORLG00000020011	trub2	84	53.214	ENSMPUG00000013206	TRUB2	76	52.500	Mustela_putorius_furo
ENSORLG00000020011	trub2	88	53.242	ENSMLUG00000005256	TRUB2	88	53.242	Myotis_lucifugus
ENSORLG00000020011	trub2	84	51.799	ENSNGAG00000018679	Trub2	84	51.799	Nannospalax_galili
ENSORLG00000020011	trub2	99	67.073	ENSNBRG00000016294	trub2	98	67.073	Neolamprologus_brichardi
ENSORLG00000020011	trub2	84	55.000	ENSNLEG00000017556	TRUB2	84	55.000	Nomascus_leucogenys
ENSORLG00000020011	trub2	84	53.237	ENSMEUG00000000484	TRUB2	89	53.237	Notamacropus_eugenii
ENSORLG00000020011	trub2	84	50.896	ENSOPRG00000001981	TRUB2	89	49.492	Ochotona_princeps
ENSORLG00000020011	trub2	89	51.678	ENSODEG00000017292	TRUB2	91	51.007	Octodon_degus
ENSORLG00000020011	trub2	99	67.073	ENSONIG00000004230	trub2	98	67.073	Oreochromis_niloticus
ENSORLG00000020011	trub2	55	50.276	ENSOANG00000029023	-	80	49.171	Ornithorhynchus_anatinus
ENSORLG00000020011	trub2	96	50.621	ENSOCUG00000026296	TRUB2	88	50.621	Oryctolagus_cuniculus
ENSORLG00000020011	trub2	96	96.562	ENSORLG00020011028	trub2	94	96.562	Oryzias_latipes_hni
ENSORLG00000020011	trub2	97	97.826	ENSORLG00015007494	trub2	98	97.826	Oryzias_latipes_hsok
ENSORLG00000020011	trub2	94	79.814	ENSOMEG00000006702	trub2	98	79.193	Oryzias_melastigma
ENSORLG00000020011	trub2	60	54.500	ENSOARG00000003785	-	87	52.273	Ovis_aries
ENSORLG00000020011	trub2	88	52.203	ENSOARG00000010579	-	89	51.525	Ovis_aries
ENSORLG00000020011	trub2	84	55.357	ENSPPAG00000043146	TRUB2	84	55.357	Pan_paniscus
ENSORLG00000020011	trub2	84	56.071	ENSPPRG00000006307	TRUB2	87	56.071	Panthera_pardus
ENSORLG00000020011	trub2	84	56.429	ENSPTIG00000012366	TRUB2	87	56.429	Panthera_tigris_altaica
ENSORLG00000020011	trub2	84	55.000	ENSPTRG00000052151	-	84	55.000	Pan_troglodytes
ENSORLG00000020011	trub2	84	55.000	ENSPTRG00000021423	TRUB2	84	55.000	Pan_troglodytes
ENSORLG00000020011	trub2	84	55.357	ENSPANG00000025856	TRUB2	84	55.357	Papio_anubis
ENSORLG00000020011	trub2	87	64.483	ENSPKIG00000019769	trub2	95	64.483	Paramormyrops_kingsleyae
ENSORLG00000020011	trub2	86	50.000	ENSPSIG00000015701	TRUB2	95	50.000	Pelodiscus_sinensis
ENSORLG00000020011	trub2	90	67.550	ENSPMGG00000010206	trub2	95	67.550	Periophthalmus_magnuspinnatus
ENSORLG00000020011	trub2	89	50.671	ENSPEMG00000017893	Trub2	89	50.671	Peromyscus_maniculatus_bairdii
ENSORLG00000020011	trub2	84	53.597	ENSPCIG00000026731	TRUB2	89	53.597	Phascolarctos_cinereus
ENSORLG00000020011	trub2	92	70.938	ENSPFOG00000018018	trub2	84	70.938	Poecilia_formosa
ENSORLG00000020011	trub2	92	70.625	ENSPLAG00000010484	trub2	91	70.625	Poecilia_latipinna
ENSORLG00000020011	trub2	95	70.427	ENSPMEG00000012913	trub2	96	70.427	Poecilia_mexicana
ENSORLG00000020011	trub2	95	69.817	ENSPREG00000002549	trub2	96	69.817	Poecilia_reticulata
ENSORLG00000020011	trub2	84	55.000	ENSPPYG00000019650	TRUB2	86	55.000	Pongo_abelii
ENSORLG00000020011	trub2	88	52.901	ENSPCAG00000015068	TRUB2	89	52.901	Procavia_capensis
ENSORLG00000020011	trub2	89	53.378	ENSPCOG00000017100	TRUB2	89	53.378	Propithecus_coquereli
ENSORLG00000020011	trub2	83	51.625	ENSPVAG00000001224	TRUB2	93	51.625	Pteropus_vampyrus
ENSORLG00000020011	trub2	96	67.683	ENSPNYG00000013666	trub2	98	67.683	Pundamilia_nyererei
ENSORLG00000020011	trub2	92	59.807	ENSPNAG00000017292	trub2	89	59.807	Pygocentrus_nattereri
ENSORLG00000020011	trub2	84	51.786	ENSRNOG00000043189	Trub2	86	51.786	Rattus_norvegicus
ENSORLG00000020011	trub2	84	50.357	ENSRBIG00000006965	TRUB2	83	50.357	Rhinopithecus_bieti
ENSORLG00000020011	trub2	84	55.357	ENSRROG00000042928	TRUB2	84	55.357	Rhinopithecus_roxellana
ENSORLG00000020011	trub2	85	54.770	ENSSBOG00000022439	TRUB2	85	54.770	Saimiri_boliviensis_boliviensis
ENSORLG00000020011	trub2	84	62.950	ENSSFOG00015013391	trub2	89	62.950	Scleropages_formosus
ENSORLG00000020011	trub2	97	71.517	ENSSMAG00000020820	trub2	97	71.517	Scophthalmus_maximus
ENSORLG00000020011	trub2	85	74.468	ENSSDUG00000016928	trub2	95	68.139	Seriola_dumerili
ENSORLG00000020011	trub2	85	73.759	ENSSLDG00000024701	trub2	95	67.508	Seriola_lalandi_dorsalis
ENSORLG00000020011	trub2	86	51.903	ENSSPUG00000015515	TRUB2	85	51.903	Sphenodon_punctatus
ENSORLG00000020011	trub2	95	71.562	ENSSPAG00000017865	trub2	96	71.562	Stegastes_partitus
ENSORLG00000020011	trub2	88	52.542	ENSSSCG00000005645	TRUB2	88	51.145	Sus_scrofa
ENSORLG00000020011	trub2	77	53.906	ENSTGUG00000003704	TRUB2	97	52.344	Taeniopygia_guttata
ENSORLG00000020011	trub2	93	66.881	ENSTRUG00000015499	trub2	95	66.881	Takifugu_rubripes
ENSORLG00000020011	trub2	87	69.550	ENSTNIG00000014721	trub2	99	69.550	Tetraodon_nigroviridis
ENSORLG00000020011	trub2	58	49.741	ENSTBEG00000000586	TRUB2	86	49.741	Tupaia_belangeri
ENSORLG00000020011	trub2	88	50.847	ENSTTRG00000016486	TRUB2	89	50.847	Tursiops_truncatus
ENSORLG00000020011	trub2	88	53.220	ENSUAMG00000020276	TRUB2	86	52.542	Ursus_americanus
ENSORLG00000020011	trub2	88	53.220	ENSUMAG00000022051	TRUB2	86	52.542	Ursus_maritimus
ENSORLG00000020011	trub2	88	40.678	ENSVPAG00000005793	TRUB2	93	40.678	Vicugna_pacos
ENSORLG00000020011	trub2	88	52.203	ENSVVUG00000013451	TRUB2	84	51.525	Vulpes_vulpes
ENSORLG00000020011	trub2	91	52.980	ENSXETG00000003973	trub2	92	52.980	Xenopus_tropicalis
ENSORLG00000020011	trub2	95	70.370	ENSXCOG00000008759	trub2	96	70.370	Xiphophorus_couchianus
ENSORLG00000020011	trub2	95	70.679	ENSXMAG00000015478	trub2	96	70.679	Xiphophorus_maculatus