EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000020074 (Gene tree)
Gene ID: 101168669
Gene Symbol: trmt1
Alias: -
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 30321 bases
Position: chr1:26740302-26770622
Accession: 101168669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000038407	TRM	PF02005.16	1.3e-139	1	1
ENSORLP00000024912	TRM	PF02005.16	1.4e-139	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000035563	-	1902	-	ENSORLP00000038407	633 (aa)	-	-
ENSORLT00000024913	-	1935	XM_004084214	ENSORLP00000024912	644 (aa)	XP_004084262	H2N0K1

Gene Model

Click here to download ENSORLG00000020074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000020074's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000020074	trmt1	90	62.803	ENSG00000104907	TRMT1	100	72.251	Homo_sapiens
ENSORLG00000020074	trmt1	92	61.655	ENSAMEG00000012598	TRMT1	87	61.800	Ailuropoda_melanoleuca
ENSORLG00000020074	trmt1	98	73.355	ENSACIG00000018680	trmt1	97	73.355	Amphilophus_citrinellus
ENSORLG00000020074	trmt1	98	79.871	ENSAOCG00000006781	trmt1	98	77.390	Amphiprion_ocellaris
ENSORLG00000020074	trmt1	98	80.032	ENSAPEG00000007712	trmt1	98	77.542	Amphiprion_percula
ENSORLG00000020074	trmt1	97	80.323	ENSATEG00000001872	trmt1	99	76.383	Anabas_testudineus
ENSORLG00000020074	trmt1	92	63.744	ENSACAG00000003825	TRMT1	94	63.744	Anolis_carolinensis
ENSORLG00000020074	trmt1	90	61.301	ENSANAG00000023016	TRMT1	92	61.301	Aotus_nancymaae
ENSORLG00000020074	trmt1	98	80.707	ENSACLG00000010073	trmt1	99	82.077	Astatotilapia_calliptera
ENSORLG00000020074	trmt1	95	71.707	ENSAMXG00000012026	trmt1	91	71.707	Astyanax_mexicanus
ENSORLG00000020074	trmt1	90	61.618	ENSBTAG00000019325	TRMT1	81	61.618	Bos_taurus
ENSORLG00000020074	trmt1	85	38.043	WBGene00006613	trm-1	96	38.165	Caenorhabditis_elegans
ENSORLG00000020074	trmt1	90	60.517	ENSCJAG00000004566	TRMT1	88	60.517	Callithrix_jacchus
ENSORLG00000020074	trmt1	92	62.139	ENSCAFG00000017070	TRMT1	91	62.139	Canis_familiaris
ENSORLG00000020074	trmt1	94	60.359	ENSCAFG00020005397	TRMT1	94	60.359	Canis_lupus_dingo
ENSORLG00000020074	trmt1	90	61.856	ENSCHIG00000013569	TRMT1	86	61.856	Capra_hircus
ENSORLG00000020074	trmt1	90	59.897	ENSTSYG00000003207	TRMT1	87	60.000	Carlito_syrichta
ENSORLG00000020074	trmt1	84	57.856	ENSCAPG00000003355	TRMT1	94	57.974	Cavia_aperea
ENSORLG00000020074	trmt1	90	61.921	ENSCPOG00000011754	TRMT1	87	62.087	Cavia_porcellus
ENSORLG00000020074	trmt1	90	60.381	ENSCCAG00000022263	TRMT1	92	60.381	Cebus_capucinus
ENSORLG00000020074	trmt1	90	62.630	ENSCATG00000039850	TRMT1	86	62.630	Cercocebus_atys
ENSORLG00000020074	trmt1	90	46.946	ENSCATG00000038220	-	90	48.561	Cercocebus_atys
ENSORLG00000020074	trmt1	90	62.306	ENSCLAG00000015295	TRMT1	89	60.140	Chinchilla_lanigera
ENSORLG00000020074	trmt1	70	67.706	ENSCSAG00000006500	TRMT1	85	67.706	Chlorocebus_sabaeus
ENSORLG00000020074	trmt1	90	67.073	ENSCPBG00000023866	TRMT1	90	63.339	Chrysemys_picta_bellii
ENSORLG00000020074	trmt1	88	45.819	ENSCING00000002884	-	99	46.127	Ciona_intestinalis
ENSORLG00000020074	trmt1	86	48.998	ENSCSAVG00000010927	-	100	48.162	Ciona_savignyi
ENSORLG00000020074	trmt1	90	51.123	ENSCANG00000040631	TRMT1	86	52.941	Colobus_angolensis_palliatus
ENSORLG00000020074	trmt1	87	48.841	ENSCANG00000031650	-	86	48.841	Colobus_angolensis_palliatus
ENSORLG00000020074	trmt1	89	61.938	ENSCGRG00001022594	Trmt1	87	61.996	Cricetulus_griseus_chok1gshd
ENSORLG00000020074	trmt1	89	61.938	ENSCGRG00000017732	Trmt1	86	61.996	Cricetulus_griseus_crigri
ENSORLG00000020074	trmt1	99	75.318	ENSCSEG00000001643	trmt1	100	72.337	Cynoglossus_semilaevis
ENSORLG00000020074	trmt1	97	78.282	ENSCVAG00000011886	trmt1	98	75.000	Cyprinodon_variegatus
ENSORLG00000020074	trmt1	95	72.549	ENSDARG00000010978	trmt1	90	72.549	Danio_rerio
ENSORLG00000020074	trmt1	82	43.152	ENSDNOG00000048240	-	89	43.238	Dasypus_novemcinctus
ENSORLG00000020074	trmt1	96	58.604	ENSDORG00000014298	Trmt1	91	58.604	Dipodomys_ordii
ENSORLG00000020074	trmt1	88	45.583	FBgn0032430	CG6388	95	45.826	Drosophila_melanogaster
ENSORLG00000020074	trmt1	51	64.103	ENSETEG00000015483	-	50	64.103	Echinops_telfairi
ENSORLG00000020074	trmt1	85	47.681	ENSEBUG00000003449	trmt1	78	47.882	Eptatretus_burgeri
ENSORLG00000020074	trmt1	90	60.616	ENSEASG00005004050	TRMT1	90	60.616	Equus_asinus_asinus
ENSORLG00000020074	trmt1	90	60.616	ENSECAG00000016149	TRMT1	90	60.616	Equus_caballus
ENSORLG00000020074	trmt1	52	72.908	ENSEEUG00000014102	-	84	72.908	Erinaceus_europaeus
ENSORLG00000020074	trmt1	98	71.361	ENSELUG00000021659	trmt1	93	71.361	Esox_lucius
ENSORLG00000020074	trmt1	90	62.027	ENSFCAG00000000483	TRMT1	88	61.368	Felis_catus
ENSORLG00000020074	trmt1	90	61.340	ENSFDAG00000007386	TRMT1	87	61.672	Fukomys_damarensis
ENSORLG00000020074	trmt1	88	78.018	ENSFHEG00000012865	trmt1	97	74.830	Fundulus_heteroclitus
ENSORLG00000020074	trmt1	91	68.394	ENSGMOG00000006564	trmt1	99	68.394	Gadus_morhua
ENSORLG00000020074	trmt1	100	76.766	ENSGAFG00000011862	trmt1	99	76.766	Gambusia_affinis
ENSORLG00000020074	trmt1	91	76.207	ENSGACG00000000227	trmt1	93	77.123	Gasterosteus_aculeatus
ENSORLG00000020074	trmt1	90	67.770	ENSGAGG00000016432	TRMT1	85	67.770	Gopherus_agassizii
ENSORLG00000020074	trmt1	90	62.976	ENSGGOG00000014007	TRMT1	87	62.976	Gorilla_gorilla
ENSORLG00000020074	trmt1	88	75.000	ENSHBUG00000008821	trmt1	92	76.667	Haplochromis_burtoni
ENSORLG00000020074	trmt1	90	61.063	ENSHGLG00000015972	TRMT1	87	61.391	Heterocephalus_glaber_female
ENSORLG00000020074	trmt1	90	58.003	ENSHGLG00100018112	TRMT1	87	59.752	Heterocephalus_glaber_male
ENSORLG00000020074	trmt1	97	73.463	ENSHCOG00000009447	trmt1	100	69.486	Hippocampus_comes
ENSORLG00000020074	trmt1	95	69.530	ENSIPUG00000002899	trmt1	94	66.667	Ictalurus_punctatus
ENSORLG00000020074	trmt1	90	61.897	ENSSTOG00000012531	TRMT1	88	61.724	Ictidomys_tridecemlineatus
ENSORLG00000020074	trmt1	90	62.969	ENSJJAG00000017154	Trmt1	88	62.969	Jaculus_jaculus
ENSORLG00000020074	trmt1	97	79.675	ENSKMAG00000011809	trmt1	98	79.695	Kryptolebias_marmoratus
ENSORLG00000020074	trmt1	97	77.778	ENSLBEG00000012703	trmt1	100	73.746	Labrus_bergylta
ENSORLG00000020074	trmt1	91	56.552	ENSLACG00000014585	TRMT1	94	56.552	Latimeria_chalumnae
ENSORLG00000020074	trmt1	91	65.052	ENSLOCG00000006479	trmt1	99	65.149	Lepisosteus_oculatus
ENSORLG00000020074	trmt1	90	62.478	ENSLAFG00000014072	TRMT1	88	62.478	Loxodonta_africana
ENSORLG00000020074	trmt1	90	62.630	ENSMFAG00000033143	TRMT1	86	62.630	Macaca_fascicularis
ENSORLG00000020074	trmt1	90	59.130	ENSMMUG00000001167	TRMT1	87	59.130	Macaca_mulatta
ENSORLG00000020074	trmt1	90	62.457	ENSMNEG00000037867	TRMT1	86	62.457	Macaca_nemestrina
ENSORLG00000020074	trmt1	90	62.284	ENSMLEG00000016142	TRMT1	87	62.284	Mandrillus_leucophaeus
ENSORLG00000020074	trmt1	98	78.744	ENSMAMG00000004357	trmt1	99	74.962	Mastacembelus_armatus
ENSORLG00000020074	trmt1	98	80.868	ENSMZEG00005014510	trmt1	95	81.701	Maylandia_zebra
ENSORLG00000020074	trmt1	89	61.938	ENSMAUG00000011134	Trmt1	86	61.996	Mesocricetus_auratus
ENSORLG00000020074	trmt1	90	63.621	ENSMICG00000000793	TRMT1	86	63.621	Microcebus_murinus
ENSORLG00000020074	trmt1	90	62.069	ENSMOCG00000015895	Trmt1	86	62.069	Microtus_ochrogaster
ENSORLG00000020074	trmt1	97	75.407	ENSMMOG00000011097	trmt1	100	74.478	Mola_mola
ENSORLG00000020074	trmt1	97	59.840	ENSMODG00000011619	TRMT1	98	59.551	Monodelphis_domestica
ENSORLG00000020074	trmt1	89	63.085	MGP_CAROLIEiJ_G0031304	Trmt1	87	63.596	Mus_caroli
ENSORLG00000020074	trmt1	89	63.258	ENSMUSG00000001909	Trmt1	87	62.821	Mus_musculus
ENSORLG00000020074	trmt1	89	63.085	MGP_SPRETEiJ_G0032422	Trmt1	87	62.393	Mus_spretus
ENSORLG00000020074	trmt1	90	63.322	ENSMPUG00000004210	TRMT1	82	63.322	Mustela_putorius_furo
ENSORLG00000020074	trmt1	90	63.511	ENSMLUG00000012809	TRMT1	86	63.511	Myotis_lucifugus
ENSORLG00000020074	trmt1	96	60.423	ENSNGAG00000022486	Trmt1	91	60.423	Nannospalax_galili
ENSORLG00000020074	trmt1	80	82.609	ENSNBRG00000024376	trmt1	87	82.609	Neolamprologus_brichardi
ENSORLG00000020074	trmt1	74	62.258	ENSNLEG00000013019	-	83	62.258	Nomascus_leucogenys
ENSORLG00000020074	trmt1	91	62.222	ENSMEUG00000013756	TRMT1	97	62.222	Notamacropus_eugenii
ENSORLG00000020074	trmt1	73	76.000	ENSOPRG00000009471	-	71	76.000	Ochotona_princeps
ENSORLG00000020074	trmt1	94	61.093	ENSODEG00000010323	TRMT1	89	61.409	Octodon_degus
ENSORLG00000020074	trmt1	98	81.190	ENSONIG00000000400	trmt1	97	80.421	Oreochromis_niloticus
ENSORLG00000020074	trmt1	80	62.308	ENSOCUG00000021934	TRMT1	95	62.452	Oryctolagus_cuniculus
ENSORLG00000020074	trmt1	100	94.554	ENSORLG00020007561	trmt1	100	94.554	Oryzias_latipes_hni
ENSORLG00000020074	trmt1	100	94.856	ENSORLG00015006547	trmt1	100	94.856	Oryzias_latipes_hsok
ENSORLG00000020074	trmt1	100	88.351	ENSOMEG00000019343	trmt1	100	88.351	Oryzias_melastigma
ENSORLG00000020074	trmt1	90	62.264	ENSOGAG00000025576	TRMT1	90	62.779	Otolemur_garnettii
ENSORLG00000020074	trmt1	90	49.829	ENSOARG00000009397	TRMT1	80	50.342	Ovis_aries
ENSORLG00000020074	trmt1	90	50.342	ENSPPRG00000012117	TRMT1	87	55.286	Panthera_pardus
ENSORLG00000020074	trmt1	67	64.685	ENSPTIG00000008833	TRMT1	82	64.685	Panthera_tigris_altaica
ENSORLG00000020074	trmt1	90	62.976	ENSPTRG00000010557	TRMT1	87	62.976	Pan_troglodytes
ENSORLG00000020074	trmt1	88	45.312	ENSPTRG00000050421	-	91	45.150	Pan_troglodytes
ENSORLG00000020074	trmt1	85	47.826	ENSPANG00000034058	-	88	47.826	Papio_anubis
ENSORLG00000020074	trmt1	90	62.630	ENSPANG00000009247	TRMT1	87	62.630	Papio_anubis
ENSORLG00000020074	trmt1	95	71.096	ENSPKIG00000005309	trmt1	91	69.032	Paramormyrops_kingsleyae
ENSORLG00000020074	trmt1	90	54.073	ENSPSIG00000008762	TRMT1	80	56.250	Pelodiscus_sinensis
ENSORLG00000020074	trmt1	96	75.413	ENSPMGG00000019764	trmt1	94	75.413	Periophthalmus_magnuspinnatus
ENSORLG00000020074	trmt1	90	62.027	ENSPEMG00000016247	Trmt1	86	62.369	Peromyscus_maniculatus_bairdii
ENSORLG00000020074	trmt1	92	60.575	ENSPMAG00000004329	trmt1	92	60.922	Petromyzon_marinus
ENSORLG00000020074	trmt1	95	60.196	ENSPCIG00000019273	TRMT1	93	60.196	Phascolarctos_cinereus
ENSORLG00000020074	trmt1	97	78.232	ENSPFOG00000008527	trmt1	99	73.900	Poecilia_formosa
ENSORLG00000020074	trmt1	97	76.923	ENSPLAG00000018788	trmt1	94	78.237	Poecilia_latipinna
ENSORLG00000020074	trmt1	97	78.069	ENSPMEG00000013120	trmt1	94	78.069	Poecilia_mexicana
ENSORLG00000020074	trmt1	95	77.243	ENSPREG00000000211	trmt1	90	77.243	Poecilia_reticulata
ENSORLG00000020074	trmt1	90	62.803	ENSPPYG00000009622	TRMT1	87	62.803	Pongo_abelii
ENSORLG00000020074	trmt1	93	57.621	ENSPCAG00000003698	TRMT1	90	57.621	Procavia_capensis
ENSORLG00000020074	trmt1	90	63.040	ENSPCOG00000008653	TRMT1	87	63.040	Propithecus_coquereli
ENSORLG00000020074	trmt1	91	61.684	ENSPVAG00000015076	TRMT1	87	61.684	Pteropus_vampyrus
ENSORLG00000020074	trmt1	99	74.802	ENSPNYG00000013960	trmt1	99	75.693	Pundamilia_nyererei
ENSORLG00000020074	trmt1	92	66.102	ENSPNAG00000024859	trmt1	91	66.102	Pygocentrus_nattereri
ENSORLG00000020074	trmt1	89	62.738	ENSRNOG00000002914	Trmt1	89	62.807	Rattus_norvegicus
ENSORLG00000020074	trmt1	87	47.153	ENSRBIG00000037505	-	90	47.687	Rhinopithecus_bieti
ENSORLG00000020074	trmt1	90	63.149	ENSRBIG00000038324	TRMT1	86	63.149	Rhinopithecus_bieti
ENSORLG00000020074	trmt1	87	46.263	ENSRROG00000031847	-	89	47.509	Rhinopithecus_roxellana
ENSORLG00000020074	trmt1	90	63.149	ENSRROG00000028599	TRMT1	86	63.149	Rhinopithecus_roxellana
ENSORLG00000020074	trmt1	81	37.523	YDR120C	-	92	37.336	Saccharomyces_cerevisiae
ENSORLG00000020074	trmt1	90	60.727	ENSSBOG00000028861	TRMT1	92	60.727	Saimiri_boliviensis_boliviensis
ENSORLG00000020074	trmt1	90	63.432	ENSSHAG00000014381	TRMT1	97	60.948	Sarcophilus_harrisii
ENSORLG00000020074	trmt1	93	71.980	ENSSFOG00015004139	trmt1	90	69.530	Scleropages_formosus
ENSORLG00000020074	trmt1	97	77.653	ENSSMAG00000021136	trmt1	100	73.926	Scophthalmus_maximus
ENSORLG00000020074	trmt1	100	75.628	ENSSDUG00000012740	trmt1	100	76.366	Seriola_dumerili
ENSORLG00000020074	trmt1	100	75.628	ENSSLDG00000005971	trmt1	100	76.366	Seriola_lalandi_dorsalis
ENSORLG00000020074	trmt1	85	59.890	ENSSARG00000005138	TRMT1	94	60.037	Sorex_araneus
ENSORLG00000020074	trmt1	95	46.515	ENSSPUG00000001084	TRMT1	96	46.926	Sphenodon_punctatus
ENSORLG00000020074	trmt1	99	79.385	ENSSPAG00000007153	trmt1	99	82.492	Stegastes_partitus
ENSORLG00000020074	trmt1	93	60.601	ENSSSCG00000013744	TRMT1	93	60.601	Sus_scrofa
ENSORLG00000020074	trmt1	97	69.231	ENSTRUG00000010700	trmt1	95	69.231	Takifugu_rubripes
ENSORLG00000020074	trmt1	91	79.066	ENSTNIG00000018808	trmt1	99	79.066	Tetraodon_nigroviridis
ENSORLG00000020074	trmt1	90	58.864	ENSTTRG00000006379	TRMT1	95	54.788	Tursiops_truncatus
ENSORLG00000020074	trmt1	92	62.395	ENSUAMG00000022911	TRMT1	96	59.799	Ursus_americanus
ENSORLG00000020074	trmt1	92	61.993	ENSUMAG00000006027	TRMT1	91	61.993	Ursus_maritimus
ENSORLG00000020074	trmt1	92	62.139	ENSVVUG00000024177	TRMT1	88	62.139	Vulpes_vulpes
ENSORLG00000020074	trmt1	71	69.265	ENSXETG00000033863	TRMT1	90	69.265	Xenopus_tropicalis
ENSORLG00000020074	trmt1	97	78.723	ENSXCOG00000015733	trmt1	94	78.723	Xiphophorus_couchianus
ENSORLG00000020074	trmt1	92	80.517	ENSXMAG00000013823	trmt1	99	80.517	Xiphophorus_maculatus