EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000020317 (Gene tree)
Gene ID: 101166439
Gene Symbol: pop4
Alias: -
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 1370 bases
Position: chr3:38184349-38185718
Accession: 101166439
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000025189	UPF0086	PF01868.16	7.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000025190	-	666	XM_004085321	ENSORLP00000025189	221 (aa)	XP_004085369	H2N192

Gene Model

Click here to download ENSORLG00000020317's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03008	Ribosome biogenesis in eukaryotes	KEGG
ola03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000020317's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000020317	pop4	91	59.901	ENSG00000105171	POP4	100	73.958	Homo_sapiens
ENSORLG00000020317	pop4	90	50.249	ENSAMEG00000003172	-	89	50.249	Ailuropoda_melanoleuca
ENSORLG00000020317	pop4	90	57.286	ENSAMEG00000018329	-	90	58.291	Ailuropoda_melanoleuca
ENSORLG00000020317	pop4	99	76.126	ENSACIG00000008358	pop4	100	76.126	Amphilophus_citrinellus
ENSORLG00000020317	pop4	92	78.818	ENSAOCG00000010116	pop4	99	78.818	Amphiprion_ocellaris
ENSORLG00000020317	pop4	100	76.682	ENSAPEG00000002829	pop4	94	76.682	Amphiprion_percula
ENSORLG00000020317	pop4	99	75.113	ENSATEG00000013028	pop4	99	75.113	Anabas_testudineus
ENSORLG00000020317	pop4	93	57.971	ENSAPLG00000014051	POP4	99	58.738	Anas_platyrhynchos
ENSORLG00000020317	pop4	91	60.396	ENSANAG00000020295	POP4	91	60.891	Aotus_nancymaae
ENSORLG00000020317	pop4	100	76.682	ENSACLG00000000526	pop4	99	76.471	Astatotilapia_calliptera
ENSORLG00000020317	pop4	96	63.551	ENSAMXG00000002899	pop4	96	63.551	Astyanax_mexicanus
ENSORLG00000020317	pop4	90	61.307	ENSBTAG00000002223	POP4	90	61.809	Bos_taurus
ENSORLG00000020317	pop4	80	30.508	WBGene00007603	C15C6.4	82	30.508	Caenorhabditis_elegans
ENSORLG00000020317	pop4	91	59.406	ENSCJAG00000046750	POP4	95	66.279	Callithrix_jacchus
ENSORLG00000020317	pop4	82	60.989	ENSCAFG00000007630	POP4	99	62.088	Canis_familiaris
ENSORLG00000020317	pop4	90	59.799	ENSCHIG00000016743	POP4	90	60.804	Capra_hircus
ENSORLG00000020317	pop4	89	59.391	ENSTSYG00000003488	POP4	89	59.898	Carlito_syrichta
ENSORLG00000020317	pop4	90	43.216	ENSCAPG00000011105	POP4	88	43.216	Cavia_aperea
ENSORLG00000020317	pop4	90	60.804	ENSCPOG00000002992	POP4	90	60.804	Cavia_porcellus
ENSORLG00000020317	pop4	64	60.993	ENSCCAG00000034244	-	87	52.356	Cebus_capucinus
ENSORLG00000020317	pop4	91	59.406	ENSCCAG00000020285	-	91	59.406	Cebus_capucinus
ENSORLG00000020317	pop4	91	60.099	ENSCATG00000036022	POP4	100	73.958	Cercocebus_atys
ENSORLG00000020317	pop4	92	61.275	ENSCLAG00000013162	POP4	90	61.765	Chinchilla_lanigera
ENSORLG00000020317	pop4	91	59.406	ENSCSAG00000004868	POP4	92	59.901	Chlorocebus_sabaeus
ENSORLG00000020317	pop4	89	42.640	ENSCHOG00000002071	POP4	90	43.147	Choloepus_hoffmanni
ENSORLG00000020317	pop4	99	55.204	ENSCPBG00000016132	POP4	99	55.656	Chrysemys_picta_bellii
ENSORLG00000020317	pop4	55	35.772	ENSCING00000023871	-	95	30.928	Ciona_intestinalis
ENSORLG00000020317	pop4	92	58.824	ENSCANG00000005924	POP4	100	59.314	Colobus_angolensis_palliatus
ENSORLG00000020317	pop4	92	58.333	ENSCGRG00001017185	Pop4	90	58.937	Cricetulus_griseus_chok1gshd
ENSORLG00000020317	pop4	92	58.333	ENSCGRG00000008155	Pop4	90	58.937	Cricetulus_griseus_crigri
ENSORLG00000020317	pop4	99	63.514	ENSCSEG00000002946	pop4	100	63.514	Cynoglossus_semilaevis
ENSORLG00000020317	pop4	99	54.751	ENSCVAG00000018602	POP4	95	54.751	Cyprinodon_variegatus
ENSORLG00000020317	pop4	99	59.729	ENSDARG00000101472	pop4	99	60.181	Danio_rerio
ENSORLG00000020317	pop4	90	60.804	ENSDNOG00000047663	POP4	79	61.307	Dasypus_novemcinctus
ENSORLG00000020317	pop4	70	55.844	ENSDORG00000008577	Pop4	88	57.143	Dipodomys_ordii
ENSORLG00000020317	pop4	74	31.765	FBgn0035831	CG8038	83	31.765	Drosophila_melanogaster
ENSORLG00000020317	pop4	91	50.000	ENSETEG00000003607	POP4	92	50.495	Echinops_telfairi
ENSORLG00000020317	pop4	67	46.980	ENSEBUG00000004305	pop4	92	40.094	Eptatretus_burgeri
ENSORLG00000020317	pop4	67	53.020	ENSEBUG00000010447	pop4	82	44.076	Eptatretus_burgeri
ENSORLG00000020317	pop4	90	40.796	ENSEBUG00000008575	pop4	89	40.796	Eptatretus_burgeri
ENSORLG00000020317	pop4	89	63.462	ENSECAG00000020206	POP4	73	63.462	Equus_caballus
ENSORLG00000020317	pop4	89	42.132	ENSEEUG00000013109	POP4	98	42.640	Erinaceus_europaeus
ENSORLG00000020317	pop4	99	61.086	ENSELUG00000019812	pop4	99	61.991	Esox_lucius
ENSORLG00000020317	pop4	90	58.291	ENSFCAG00000001619	POP4	90	58.794	Felis_catus
ENSORLG00000020317	pop4	92	59.804	ENSFALG00000000206	POP4	90	60.784	Ficedula_albicollis
ENSORLG00000020317	pop4	92	59.804	ENSFDAG00000017859	POP4	90	60.294	Fukomys_damarensis
ENSORLG00000020317	pop4	96	64.019	ENSFHEG00000012745	pop4	96	64.019	Fundulus_heteroclitus
ENSORLG00000020317	pop4	89	68.367	ENSGMOG00000000335	pop4	97	68.367	Gadus_morhua
ENSORLG00000020317	pop4	100	55.157	ENSGALG00000041972	POP4	93	56.054	Gallus_gallus
ENSORLG00000020317	pop4	79	65.537	ENSGAFG00000003571	pop4	98	65.537	Gambusia_affinis
ENSORLG00000020317	pop4	99	72.851	ENSGACG00000014510	pop4	96	79.661	Gasterosteus_aculeatus
ENSORLG00000020317	pop4	99	55.204	ENSGAGG00000024544	POP4	79	55.656	Gopherus_agassizii
ENSORLG00000020317	pop4	91	59.901	ENSGGOG00000038346	POP4	91	60.396	Gorilla_gorilla
ENSORLG00000020317	pop4	99	76.018	ENSHBUG00000021821	pop4	99	76.018	Haplochromis_burtoni
ENSORLG00000020317	pop4	92	59.314	ENSHGLG00000015798	POP4	90	59.804	Heterocephalus_glaber_female
ENSORLG00000020317	pop4	92	59.314	ENSHGLG00100009737	POP4	90	59.804	Heterocephalus_glaber_male
ENSORLG00000020317	pop4	99	68.326	ENSHCOG00000020937	pop4	99	68.326	Hippocampus_comes
ENSORLG00000020317	pop4	99	61.538	ENSIPUG00000013652	pop4	99	61.538	Ictalurus_punctatus
ENSORLG00000020317	pop4	91	60.199	ENSSTOG00000011016	POP4	90	60.697	Ictidomys_tridecemlineatus
ENSORLG00000020317	pop4	92	60.099	ENSJJAG00000013376	Pop4	90	61.084	Jaculus_jaculus
ENSORLG00000020317	pop4	99	76.018	ENSKMAG00000012250	pop4	99	76.018	Kryptolebias_marmoratus
ENSORLG00000020317	pop4	99	67.421	ENSLBEG00000014139	pop4	99	67.421	Labrus_bergylta
ENSORLG00000020317	pop4	99	67.421	ENSLBEG00000018846	-	99	67.421	Labrus_bergylta
ENSORLG00000020317	pop4	98	55.251	ENSLACG00000008581	POP4	98	56.164	Latimeria_chalumnae
ENSORLG00000020317	pop4	99	60.633	ENSLOCG00000005597	pop4	99	61.538	Lepisosteus_oculatus
ENSORLG00000020317	pop4	91	59.406	ENSLAFG00000000084	POP4	91	59.406	Loxodonta_africana
ENSORLG00000020317	pop4	91	59.406	ENSMFAG00000029606	POP4	91	59.901	Macaca_fascicularis
ENSORLG00000020317	pop4	91	58.416	ENSMMUG00000017424	POP4	91	59.901	Macaca_mulatta
ENSORLG00000020317	pop4	91	58.416	ENSMNEG00000031374	POP4	91	59.901	Macaca_nemestrina
ENSORLG00000020317	pop4	91	59.406	ENSMLEG00000043454	POP4	91	60.396	Mandrillus_leucophaeus
ENSORLG00000020317	pop4	100	78.027	ENSMAMG00000011716	pop4	100	78.027	Mastacembelus_armatus
ENSORLG00000020317	pop4	99	76.471	ENSMZEG00005002360	pop4	99	76.471	Maylandia_zebra
ENSORLG00000020317	pop4	96	57.477	ENSMGAG00000005337	POP4	95	58.411	Meleagris_gallopavo
ENSORLG00000020317	pop4	92	59.804	ENSMAUG00000020110	Pop4	90	59.804	Mesocricetus_auratus
ENSORLG00000020317	pop4	90	58.291	ENSMICG00000035730	POP4	88	59.500	Microcebus_murinus
ENSORLG00000020317	pop4	100	70.404	ENSMMOG00000015321	pop4	100	70.852	Mola_mola
ENSORLG00000020317	pop4	91	59.204	ENSMODG00000029406	POP4	86	60.199	Monodelphis_domestica
ENSORLG00000020317	pop4	99	74.661	ENSMALG00000012571	pop4	99	75.566	Monopterus_albus
ENSORLG00000020317	pop4	92	59.314	MGP_CAROLIEiJ_G0029600	Pop4	90	60.294	Mus_caroli
ENSORLG00000020317	pop4	92	60.294	ENSMUSG00000030423	Pop4	90	60.294	Mus_musculus
ENSORLG00000020317	pop4	92	59.804	MGP_SPRETEiJ_G0030699	Pop4	90	60.976	Mus_spretus
ENSORLG00000020317	pop4	94	51.442	ENSMPUG00000008063	-	92	51.923	Mustela_putorius_furo
ENSORLG00000020317	pop4	94	57.005	ENSMPUG00000008041	-	92	57.971	Mustela_putorius_furo
ENSORLG00000020317	pop4	89	46.465	ENSMLUG00000010774	POP4	89	46.970	Myotis_lucifugus
ENSORLG00000020317	pop4	57	65.600	ENSMEUG00000003636	-	100	65.600	Notamacropus_eugenii
ENSORLG00000020317	pop4	92	59.804	ENSOPRG00000004736	POP4	99	60.294	Ochotona_princeps
ENSORLG00000020317	pop4	92	59.804	ENSODEG00000013025	POP4	94	60.294	Octodon_degus
ENSORLG00000020317	pop4	100	74.888	ENSONIG00000003458	pop4	98	74.888	Oreochromis_niloticus
ENSORLG00000020317	pop4	92	60.294	ENSOCUG00000015974	POP4	90	60.784	Oryctolagus_cuniculus
ENSORLG00000020317	pop4	99	97.738	ENSORLG00015011624	pop4	99	97.738	Oryzias_latipes_hsok
ENSORLG00000020317	pop4	99	87.330	ENSOMEG00000002538	pop4	99	87.330	Oryzias_melastigma
ENSORLG00000020317	pop4	93	58.173	ENSOGAG00000011168	POP4	94	58.852	Otolemur_garnettii
ENSORLG00000020317	pop4	90	59.799	ENSOARG00000004041	POP4	89	60.804	Ovis_aries
ENSORLG00000020317	pop4	91	59.901	ENSPPAG00000040372	POP4	91	60.396	Pan_paniscus
ENSORLG00000020317	pop4	90	58.291	ENSPPRG00000010502	POP4	90	58.794	Panthera_pardus
ENSORLG00000020317	pop4	90	58.291	ENSPTIG00000016598	POP4	90	58.794	Panthera_tigris_altaica
ENSORLG00000020317	pop4	91	59.901	ENSPTRG00000010779	POP4	91	60.396	Pan_troglodytes
ENSORLG00000020317	pop4	91	59.406	ENSPANG00000008546	POP4	91	59.901	Papio_anubis
ENSORLG00000020317	pop4	94	61.836	ENSPKIG00000004468	pop4	91	61.836	Paramormyrops_kingsleyae
ENSORLG00000020317	pop4	100	55.157	ENSPSIG00000015690	POP4	100	59.804	Pelodiscus_sinensis
ENSORLG00000020317	pop4	93	65.385	ENSPMGG00000008608	pop4	99	67.308	Periophthalmus_magnuspinnatus
ENSORLG00000020317	pop4	94	58.571	ENSPEMG00000014034	-	96	58.571	Peromyscus_maniculatus_bairdii
ENSORLG00000020317	pop4	92	50.000	ENSPEMG00000019982	-	90	50.000	Peromyscus_maniculatus_bairdii
ENSORLG00000020317	pop4	66	63.448	ENSPMAG00000006265	pop4	73	63.448	Petromyzon_marinus
ENSORLG00000020317	pop4	91	59.204	ENSPCIG00000024738	POP4	86	59.204	Phascolarctos_cinereus
ENSORLG00000020317	pop4	99	69.683	ENSPFOG00000000925	pop4	99	69.683	Poecilia_formosa
ENSORLG00000020317	pop4	99	69.683	ENSPLAG00000003161	pop4	99	69.683	Poecilia_latipinna
ENSORLG00000020317	pop4	99	69.683	ENSPMEG00000002475	pop4	99	69.683	Poecilia_mexicana
ENSORLG00000020317	pop4	100	70.136	ENSPREG00000022403	pop4	94	70.136	Poecilia_reticulata
ENSORLG00000020317	pop4	91	59.901	ENSPPYG00000009805	POP4	91	60.396	Pongo_abelii
ENSORLG00000020317	pop4	91	59.901	ENSPCAG00000007737	POP4	91	60.396	Procavia_capensis
ENSORLG00000020317	pop4	90	57.789	ENSPCOG00000018055	POP4	90	58.291	Propithecus_coquereli
ENSORLG00000020317	pop4	90	60.302	ENSPVAG00000006069	POP4	90	60.302	Pteropus_vampyrus
ENSORLG00000020317	pop4	99	75.566	ENSPNYG00000020038	pop4	99	75.566	Pundamilia_nyererei
ENSORLG00000020317	pop4	99	61.538	ENSPNAG00000005591	pop4	99	61.538	Pygocentrus_nattereri
ENSORLG00000020317	pop4	92	58.824	ENSRNOG00000027646	Pop4	90	59.804	Rattus_norvegicus
ENSORLG00000020317	pop4	72	55.975	ENSRBIG00000044769	POP4	84	62.121	Rhinopithecus_bieti
ENSORLG00000020317	pop4	91	59.406	ENSRROG00000028903	POP4	91	59.901	Rhinopithecus_roxellana
ENSORLG00000020317	pop4	57	30.000	YBR257W	-	50	30.000	Saccharomyces_cerevisiae
ENSORLG00000020317	pop4	91	59.901	ENSSBOG00000032445	POP4	91	59.901	Saimiri_boliviensis_boliviensis
ENSORLG00000020317	pop4	91	59.701	ENSSHAG00000016888	POP4	90	59.701	Sarcophilus_harrisii
ENSORLG00000020317	pop4	99	60.444	ENSSFOG00015014556	pop4	98	60.444	Scleropages_formosus
ENSORLG00000020317	pop4	99	73.303	ENSSMAG00000016611	pop4	99	73.303	Scophthalmus_maximus
ENSORLG00000020317	pop4	100	78.027	ENSSDUG00000019865	pop4	90	78.027	Seriola_dumerili
ENSORLG00000020317	pop4	100	77.578	ENSSLDG00000001763	pop4	99	77.578	Seriola_lalandi_dorsalis
ENSORLG00000020317	pop4	90	59.204	ENSSARG00000004748	POP4	92	60.199	Sorex_araneus
ENSORLG00000020317	pop4	99	78.281	ENSSPAG00000014364	pop4	99	78.281	Stegastes_partitus
ENSORLG00000020317	pop4	90	60.302	ENSSSCG00000002854	POP4	90	60.302	Sus_scrofa
ENSORLG00000020317	pop4	91	58.911	ENSTGUG00000008953	POP4	100	59.901	Taeniopygia_guttata
ENSORLG00000020317	pop4	92	70.098	ENSTNIG00000006401	pop4	100	70.098	Tetraodon_nigroviridis
ENSORLG00000020317	pop4	90	61.616	ENSTBEG00000002194	POP4	89	61.616	Tupaia_belangeri
ENSORLG00000020317	pop4	89	60.406	ENSTTRG00000005882	POP4	89	60.914	Tursiops_truncatus
ENSORLG00000020317	pop4	90	57.789	ENSUAMG00000003049	-	90	58.291	Ursus_americanus
ENSORLG00000020317	pop4	90	57.789	ENSUMAG00000007522	-	90	58.291	Ursus_maritimus
ENSORLG00000020317	pop4	89	59.898	ENSVVUG00000016876	-	68	60.914	Vulpes_vulpes
ENSORLG00000020317	pop4	95	52.489	ENSXETG00000017598	pop4	99	52.941	Xenopus_tropicalis
ENSORLG00000020317	pop4	100	68.468	ENSXCOG00000017695	pop4	94	68.468	Xiphophorus_couchianus
ENSORLG00000020317	pop4	100	68.468	ENSXMAG00000013862	pop4	94	68.468	Xiphophorus_maculatus