EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000020418 (Gene tree)
Gene ID: 101159318
Gene Symbol: srp72
Alias: -
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 11138 bases
Position: chr10:3706483-3717620
Accession: 101159318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000025305	SRP72	PF08492.12	1.3e-20	1	1
ENSORLP00000030419	SRP72	PF08492.12	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000025306	-	1764	-	ENSORLP00000025305	587 (aa)	-	H2N1K0
ENSORLT00000045018	-	3321	XM_004084978	ENSORLP00000030419	667 (aa)	XP_004085026	UPI0002A4AA09

Gene Model

Click here to download ENSORLG00000020418's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000020418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000020418	srp72	97	75.115	ENSG00000174780	SRP72	99	75.505	Homo_sapiens
ENSORLG00000020418	srp72	99	85.240	ENSAPOG00000019438	srp72	97	84.772	Acanthochromis_polyacanthus
ENSORLG00000020418	srp72	96	75.428	ENSAMEG00000008469	SRP72	99	75.708	Ailuropoda_melanoleuca
ENSORLG00000020418	srp72	99	87.612	ENSACIG00000000488	srp72	100	86.716	Amphilophus_citrinellus
ENSORLG00000020418	srp72	99	87.856	ENSAOCG00000011256	srp72	100	87.575	Amphiprion_ocellaris
ENSORLG00000020418	srp72	99	88.323	ENSAPEG00000001512	srp72	100	87.425	Amphiprion_percula
ENSORLG00000020418	srp72	92	88.943	ENSATEG00000006781	srp72	99	88.943	Anabas_testudineus
ENSORLG00000020418	srp72	99	75.606	ENSAPLG00000008751	SRP72	98	75.606	Anas_platyrhynchos
ENSORLG00000020418	srp72	97	75.501	ENSACAG00000002381	SRP72	98	74.290	Anolis_carolinensis
ENSORLG00000020418	srp72	96	74.495	ENSANAG00000020836	-	99	75.505	Aotus_nancymaae
ENSORLG00000020418	srp72	99	88.922	ENSACLG00000014617	srp72	100	88.024	Astatotilapia_calliptera
ENSORLG00000020418	srp72	98	81.288	ENSAMXG00000004011	srp72	100	80.960	Astyanax_mexicanus
ENSORLG00000020418	srp72	97	74.347	ENSBTAG00000010593	SRP72	99	75.112	Bos_taurus
ENSORLG00000020418	srp72	97	74.654	ENSCJAG00000017998	SRP72	99	75.505	Callithrix_jacchus
ENSORLG00000020418	srp72	97	75.269	ENSCAFG00000002244	SRP72	99	75.862	Canis_familiaris
ENSORLG00000020418	srp72	97	75.269	ENSCAFG00020027338	SRP72	99	76.010	Canis_lupus_dingo
ENSORLG00000020418	srp72	97	72.699	ENSCHIG00000021465	SRP72	99	73.503	Capra_hircus
ENSORLG00000020418	srp72	97	75.697	ENSTSYG00000010571	-	100	74.889	Carlito_syrichta
ENSORLG00000020418	srp72	78	65.126	ENSCAPG00000016668	SRP72	100	64.981	Cavia_aperea
ENSORLG00000020418	srp72	97	74.654	ENSCPOG00000000218	SRP72	99	75.253	Cavia_porcellus
ENSORLG00000020418	srp72	96	74.455	ENSCCAG00000030683	-	91	76.020	Cebus_capucinus
ENSORLG00000020418	srp72	97	72.923	ENSCCAG00000030830	-	99	73.123	Cebus_capucinus
ENSORLG00000020418	srp72	97	74.962	ENSCATG00000008072	SRP72	99	75.253	Cercocebus_atys
ENSORLG00000020418	srp72	98	59.418	ENSCATG00000045359	-	96	59.112	Cercocebus_atys
ENSORLG00000020418	srp72	97	74.501	ENSCLAG00000003571	SRP72	99	73.763	Chinchilla_lanigera
ENSORLG00000020418	srp72	97	71.319	ENSCSAG00000005079	SRP72	99	71.557	Chlorocebus_sabaeus
ENSORLG00000020418	srp72	89	75.439	ENSCHOG00000013240	SRP72	89	75.439	Choloepus_hoffmanni
ENSORLG00000020418	srp72	96	75.428	ENSCPBG00000015015	SRP72	99	74.102	Chrysemys_picta_bellii
ENSORLG00000020418	srp72	97	41.902	ENSCING00000002417	-	98	41.263	Ciona_intestinalis
ENSORLG00000020418	srp72	94	41.512	ENSCSAVG00000011288	-	99	39.716	Ciona_savignyi
ENSORLG00000020418	srp72	97	74.962	ENSCANG00000041709	SRP72	99	75.253	Colobus_angolensis_palliatus
ENSORLG00000020418	srp72	96	53.697	ENSCANG00000037920	-	95	53.860	Colobus_angolensis_palliatus
ENSORLG00000020418	srp72	99	74.963	ENSCGRG00001013548	Srp72	99	75.412	Cricetulus_griseus_chok1gshd
ENSORLG00000020418	srp72	95	75.237	ENSCGRG00000003013	Srp72	99	75.710	Cricetulus_griseus_crigri
ENSORLG00000020418	srp72	99	85.629	ENSCSEG00000003616	srp72	100	85.329	Cynoglossus_semilaevis
ENSORLG00000020418	srp72	91	89.819	ENSCVAG00000001520	srp72	100	89.819	Cyprinodon_variegatus
ENSORLG00000020418	srp72	85	80.877	ENSDARG00000014139	srp72	99	80.135	Danio_rerio
ENSORLG00000020418	srp72	97	70.904	ENSDNOG00000039012	SRP72	83	71.450	Dasypus_novemcinctus
ENSORLG00000020418	srp72	96	74.574	ENSDORG00000000171	Srp72	99	74.663	Dipodomys_ordii
ENSORLG00000020418	srp72	95	39.564	FBgn0038810	Srp72	98	39.389	Drosophila_melanogaster
ENSORLG00000020418	srp72	96	75.583	ENSETEG00000005191	SRP72	99	75.562	Echinops_telfairi
ENSORLG00000020418	srp72	73	63.008	ENSEBUG00000003696	srp72	97	63.265	Eptatretus_burgeri
ENSORLG00000020418	srp72	97	75.269	ENSEASG00005017747	SRP72	99	75.412	Equus_asinus_asinus
ENSORLG00000020418	srp72	97	75.115	ENSECAG00000006920	SRP72	99	75.262	Equus_caballus
ENSORLG00000020418	srp72	99	82.318	ENSELUG00000022415	srp72	100	81.724	Esox_lucius
ENSORLG00000020418	srp72	97	75.387	ENSFCAG00000027600	SRP72	99	76.010	Felis_catus
ENSORLG00000020418	srp72	96	76.947	ENSFALG00000006713	SRP72	99	76.462	Ficedula_albicollis
ENSORLG00000020418	srp72	97	74.501	ENSFDAG00000002014	-	99	74.663	Fukomys_damarensis
ENSORLG00000020418	srp72	97	49.576	ENSFDAG00000009793	-	95	48.571	Fukomys_damarensis
ENSORLG00000020418	srp72	99	87.743	ENSFHEG00000017652	srp72	92	87.444	Fundulus_heteroclitus
ENSORLG00000020418	srp72	99	78.625	ENSGMOG00000005986	srp72	98	78.963	Gadus_morhua
ENSORLG00000020418	srp72	96	76.599	ENSGALG00000011403	SRP72	99	76.276	Gallus_gallus
ENSORLG00000020418	srp72	99	88.341	ENSGAFG00000017762	srp72	100	87.444	Gambusia_affinis
ENSORLG00000020418	srp72	99	84.903	ENSGACG00000016749	srp72	99	84.155	Gasterosteus_aculeatus
ENSORLG00000020418	srp72	86	75.742	ENSGAGG00000024611	SRP72	98	74.705	Gopherus_agassizii
ENSORLG00000020418	srp72	97	74.808	ENSGGOG00000013234	-	99	75.253	Gorilla_gorilla
ENSORLG00000020418	srp72	99	88.922	ENSHBUG00000020723	srp72	100	88.024	Haplochromis_burtoni
ENSORLG00000020418	srp72	97	69.892	ENSHGLG00000005029	-	99	69.565	Heterocephalus_glaber_female
ENSORLG00000020418	srp72	96	58.230	ENSHGLG00000018597	-	99	58.673	Heterocephalus_glaber_female
ENSORLG00000020418	srp72	97	74.654	ENSHGLG00000009791	SRP72	99	74.813	Heterocephalus_glaber_female
ENSORLG00000020418	srp72	51	59.172	ENSHGLG00000003496	-	98	56.522	Heterocephalus_glaber_female
ENSORLG00000020418	srp72	97	59.545	ENSHGLG00000003950	-	99	69.333	Heterocephalus_glaber_female
ENSORLG00000020418	srp72	90	66.755	ENSHGLG00000010633	-	99	67.819	Heterocephalus_glaber_female
ENSORLG00000020418	srp72	97	69.892	ENSHGLG00100011236	-	99	69.565	Heterocephalus_glaber_male
ENSORLG00000020418	srp72	97	74.654	ENSHGLG00100009021	SRP72	99	74.813	Heterocephalus_glaber_male
ENSORLG00000020418	srp72	90	62.385	ENSHGLG00100009346	-	99	60.233	Heterocephalus_glaber_male
ENSORLG00000020418	srp72	97	59.370	ENSHGLG00100017133	-	99	68.889	Heterocephalus_glaber_male
ENSORLG00000020418	srp72	99	84.985	ENSHCOG00000013760	srp72	100	84.985	Hippocampus_comes
ENSORLG00000020418	srp72	99	81.409	ENSIPUG00000000210	srp72	100	81.409	Ictalurus_punctatus
ENSORLG00000020418	srp72	97	75.115	ENSSTOG00000007305	SRP72	99	75.262	Ictidomys_tridecemlineatus
ENSORLG00000020418	srp72	96	75.469	ENSJJAG00000018324	Srp72	99	75.505	Jaculus_jaculus
ENSORLG00000020418	srp72	98	87.652	ENSKMAG00000003776	srp72	100	86.547	Kryptolebias_marmoratus
ENSORLG00000020418	srp72	98	81.902	ENSLOCG00000002628	srp72	97	81.957	Lepisosteus_oculatus
ENSORLG00000020418	srp72	97	74.962	ENSLAFG00000018307	SRP72	99	75.112	Loxodonta_africana
ENSORLG00000020418	srp72	98	60.337	ENSMFAG00000037164	-	97	60.775	Macaca_fascicularis
ENSORLG00000020418	srp72	97	74.962	ENSMFAG00000031065	SRP72	99	75.253	Macaca_fascicularis
ENSORLG00000020418	srp72	98	74.962	ENSMMUG00000016368	SRP72	99	75.253	Macaca_mulatta
ENSORLG00000020418	srp72	85	68.182	ENSMMUG00000021262	-	96	68.182	Macaca_mulatta
ENSORLG00000020418	srp72	97	74.962	ENSMNEG00000038065	-	99	75.253	Macaca_nemestrina
ENSORLG00000020418	srp72	96	73.250	ENSMLEG00000030140	-	91	74.104	Mandrillus_leucophaeus
ENSORLG00000020418	srp72	99	87.126	ENSMAMG00000014989	srp72	88	86.228	Mastacembelus_armatus
ENSORLG00000020418	srp72	99	89.100	ENSMZEG00005003325	srp72	100	88.024	Maylandia_zebra
ENSORLG00000020418	srp72	95	72.555	ENSMGAG00000008567	SRP72	100	75.161	Meleagris_gallopavo
ENSORLG00000020418	srp72	99	74.962	ENSMAUG00000001237	Srp72	99	75.112	Mesocricetus_auratus
ENSORLG00000020418	srp72	96	74.339	ENSMICG00000008507	-	91	75.896	Microcebus_murinus
ENSORLG00000020418	srp72	99	74.663	ENSMOCG00000020309	Srp72	99	75.112	Microtus_ochrogaster
ENSORLG00000020418	srp72	99	85.479	ENSMMOG00000002627	srp72	100	84.731	Mola_mola
ENSORLG00000020418	srp72	96	71.184	ENSMODG00000020697	SRP72	99	70.315	Monodelphis_domestica
ENSORLG00000020418	srp72	99	86.228	ENSMALG00000003747	srp72	100	85.430	Monopterus_albus
ENSORLG00000020418	srp72	99	74.663	MGP_CAROLIEiJ_G0027323	Srp72	99	75.262	Mus_caroli
ENSORLG00000020418	srp72	99	74.663	ENSMUSG00000036323	Srp72	99	75.262	Mus_musculus
ENSORLG00000020418	srp72	99	74.773	MGP_PahariEiJ_G0017103	Srp72	99	75.112	Mus_pahari
ENSORLG00000020418	srp72	99	74.663	MGP_SPRETEiJ_G0028317	Srp72	99	75.262	Mus_spretus
ENSORLG00000020418	srp72	96	75.428	ENSMPUG00000004828	SRP72	99	75.712	Mustela_putorius_furo
ENSORLG00000020418	srp72	96	75.000	ENSMLUG00000007344	SRP72	99	75.299	Myotis_lucifugus
ENSORLG00000020418	srp72	99	74.963	ENSNGAG00000012595	Srp72	100	74.963	Nannospalax_galili
ENSORLG00000020418	srp72	99	85.180	ENSNBRG00000014492	srp72	100	84.281	Neolamprologus_brichardi
ENSORLG00000020418	srp72	97	69.753	ENSNLEG00000008806	-	99	69.715	Nomascus_leucogenys
ENSORLG00000020418	srp72	98	65.805	ENSMEUG00000005164	SRP72	90	73.320	Notamacropus_eugenii
ENSORLG00000020418	srp72	96	74.375	ENSOPRG00000012521	SRP72	99	74.213	Ochotona_princeps
ENSORLG00000020418	srp72	96	73.095	ENSODEG00000012214	SRP72	100	72.131	Octodon_degus
ENSORLG00000020418	srp72	99	88.922	ENSONIG00000001446	srp72	99	88.024	Oreochromis_niloticus
ENSORLG00000020418	srp72	86	67.368	ENSOANG00000008562	SRP72	97	60.514	Ornithorhynchus_anatinus
ENSORLG00000020418	srp72	97	75.000	ENSOCUG00000012226	SRP72	99	73.913	Oryctolagus_cuniculus
ENSORLG00000020418	srp72	100	99.250	ENSORLG00020009138	srp72	97	99.250	Oryzias_latipes_hni
ENSORLG00000020418	srp72	100	99.250	ENSORLG00015018251	srp72	100	99.250	Oryzias_latipes_hsok
ENSORLG00000020418	srp72	100	94.753	ENSOMEG00000022008	srp72	100	95.952	Oryzias_melastigma
ENSORLG00000020418	srp72	97	75.576	ENSOGAG00000003578	SRP72	99	76.012	Otolemur_garnettii
ENSORLG00000020418	srp72	97	74.347	ENSOARG00000004329	SRP72	99	75.112	Ovis_aries
ENSORLG00000020418	srp72	82	58.909	ENSPPAG00000032490	-	90	59.065	Pan_paniscus
ENSORLG00000020418	srp72	98	53.364	ENSPPAG00000011428	-	94	53.846	Pan_paniscus
ENSORLG00000020418	srp72	97	75.115	ENSPPAG00000042265	SRP72	99	75.262	Pan_paniscus
ENSORLG00000020418	srp72	96	75.428	ENSPPRG00000015991	SRP72	100	76.010	Panthera_pardus
ENSORLG00000020418	srp72	96	75.428	ENSPTIG00000018786	SRP72	100	76.010	Panthera_tigris_altaica
ENSORLG00000020418	srp72	98	55.199	ENSPTRG00000048100	-	94	55.692	Pan_troglodytes
ENSORLG00000020418	srp72	80	59.701	ENSPTRG00000043609	-	95	57.544	Pan_troglodytes
ENSORLG00000020418	srp72	97	75.115	ENSPTRG00000048466	-	99	75.505	Pan_troglodytes
ENSORLG00000020418	srp72	94	59.716	ENSPANG00000030230	-	98	59.810	Papio_anubis
ENSORLG00000020418	srp72	97	74.962	ENSPANG00000005495	SRP72	99	75.253	Papio_anubis
ENSORLG00000020418	srp72	93	74.920	ENSPSIG00000003003	SRP72	100	73.988	Pelodiscus_sinensis
ENSORLG00000020418	srp72	99	74.810	ENSPEMG00000012828	-	99	74.813	Peromyscus_maniculatus_bairdii
ENSORLG00000020418	srp72	97	74.149	ENSPCIG00000000732	SRP72	99	73.163	Phascolarctos_cinereus
ENSORLG00000020418	srp72	99	88.640	ENSPFOG00000003480	srp72	100	88.191	Poecilia_formosa
ENSORLG00000020418	srp72	99	88.789	ENSPLAG00000020122	srp72	100	87.892	Poecilia_latipinna
ENSORLG00000020418	srp72	99	88.191	ENSPMEG00000019988	srp72	100	87.743	Poecilia_mexicana
ENSORLG00000020418	srp72	99	88.042	ENSPREG00000006218	srp72	100	87.145	Poecilia_reticulata
ENSORLG00000020418	srp72	97	74.962	ENSPPYG00000014752	-	78	75.112	Pongo_abelii
ENSORLG00000020418	srp72	61	57.480	ENSPPYG00000009152	-	96	59.845	Pongo_abelii
ENSORLG00000020418	srp72	97	73.579	ENSPVAG00000005590	SRP72	99	74.213	Pteropus_vampyrus
ENSORLG00000020418	srp72	99	88.772	ENSPNYG00000001916	srp72	100	87.874	Pundamilia_nyererei
ENSORLG00000020418	srp72	98	82.263	ENSPNAG00000022424	srp72	100	82.159	Pygocentrus_nattereri
ENSORLG00000020418	srp72	99	73.613	ENSRNOG00000002100	LOC108348180	99	74.063	Rattus_norvegicus
ENSORLG00000020418	srp72	99	57.681	ENSRBIG00000029328	-	98	58.621	Rhinopithecus_bieti
ENSORLG00000020418	srp72	97	70.154	ENSRBIG00000042069	SRP72	99	70.270	Rhinopithecus_bieti
ENSORLG00000020418	srp72	97	74.962	ENSRROG00000035704	SRP72	99	75.253	Rhinopithecus_roxellana
ENSORLG00000020418	srp72	93	73.955	ENSSHAG00000000614	SRP72	99	70.641	Sarcophilus_harrisii
ENSORLG00000020418	srp72	99	82.309	ENSSFOG00015002026	srp72	100	82.309	Scleropages_formosus
ENSORLG00000020418	srp72	98	86.322	ENSSMAG00000007639	srp72	98	86.018	Scophthalmus_maximus
ENSORLG00000020418	srp72	99	88.174	ENSSDUG00000007345	srp72	98	87.425	Seriola_dumerili
ENSORLG00000020418	srp72	99	88.323	ENSSLDG00000021819	srp72	98	87.575	Seriola_lalandi_dorsalis
ENSORLG00000020418	srp72	81	70.157	ENSSARG00000005804	SRP72	76	72.111	Sorex_araneus
ENSORLG00000020418	srp72	96	75.857	ENSSPUG00000009740	SRP72	97	75.878	Sphenodon_punctatus
ENSORLG00000020418	srp72	99	89.521	ENSSPAG00000011565	srp72	100	88.772	Stegastes_partitus
ENSORLG00000020418	srp72	99	72.961	ENSSSCG00000008900	SRP72	99	73.163	Sus_scrofa
ENSORLG00000020418	srp72	96	76.827	ENSTGUG00000004767	SRP72	99	76.198	Taeniopygia_guttata
ENSORLG00000020418	srp72	99	86.036	ENSTRUG00000009831	srp72	100	86.036	Takifugu_rubripes
ENSORLG00000020418	srp72	99	86.976	ENSTNIG00000013073	srp72	99	86.078	Tetraodon_nigroviridis
ENSORLG00000020418	srp72	97	63.684	ENSTBEG00000007394	SRP72	99	53.973	Tupaia_belangeri
ENSORLG00000020418	srp72	92	74.595	ENSTTRG00000010945	SRP72	100	75.394	Tursiops_truncatus
ENSORLG00000020418	srp72	62	70.833	ENSUAMG00000001701	SRP72	100	75.526	Ursus_americanus
ENSORLG00000020418	srp72	96	75.272	ENSUMAG00000008151	SRP72	100	75.559	Ursus_maritimus
ENSORLG00000020418	srp72	97	73.579	ENSVPAG00000000458	SRP72	99	74.363	Vicugna_pacos
ENSORLG00000020418	srp72	97	75.115	ENSVVUG00000006020	SRP72	99	75.712	Vulpes_vulpes
ENSORLG00000020418	srp72	95	71.743	ENSXETG00000010205	srp72	100	71.586	Xenopus_tropicalis
ENSORLG00000020418	srp72	99	87.743	ENSXMAG00000018000	srp72	99	86.527	Xiphophorus_maculatus