EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000020457 (Gene tree)
Gene ID: 101173619
Gene Symbol: rabl3
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 2802 bases
Position: chr21:29672865-29675666
Accession: 101173619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000025350	MMR_HSR1	PF01926.23	1e-05	1	1
ENSORLP00000043466	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000033831	-	1006	-	ENSORLP00000043466	243 (aa)	-	-
ENSORLT00000025351	-	976	XM_004086920	ENSORLP00000025350	233 (aa)	XP_004086968	H2N1P2

Gene Model

Click here to download ENSORLG00000020457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000020457's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000020457	rabl3	55	32.061	ENSORLG00000030642	zgc:101559	52	32.061
ENSORLG00000020457	rabl3	53	30.400	ENSORLG00000028885	rab35b	57	30.400

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000020457	rabl3	100	84.746	ENSG00000144840	RABL3	100	93.023	Homo_sapiens
ENSORLG00000020457	rabl3	100	94.872	ENSAPOG00000024479	rabl3	100	94.872	Acanthochromis_polyacanthus
ENSORLG00000020457	rabl3	100	85.593	ENSAMEG00000004809	RABL3	100	85.593	Ailuropoda_melanoleuca
ENSORLG00000020457	rabl3	100	90.129	ENSACIG00000014343	rabl3	100	90.129	Amphilophus_citrinellus
ENSORLG00000020457	rabl3	100	94.872	ENSAOCG00000011851	rabl3	100	94.872	Amphiprion_ocellaris
ENSORLG00000020457	rabl3	100	94.872	ENSAPEG00000011214	rabl3	100	94.872	Amphiprion_percula
ENSORLG00000020457	rabl3	100	95.279	ENSATEG00000003503	rabl3	100	95.279	Anabas_testudineus
ENSORLG00000020457	rabl3	100	81.356	ENSACAG00000011313	-	100	81.356	Anolis_carolinensis
ENSORLG00000020457	rabl3	100	86.864	ENSANAG00000027278	RABL3	100	86.864	Aotus_nancymaae
ENSORLG00000020457	rabl3	100	95.279	ENSACLG00000009820	rabl3	100	95.279	Astatotilapia_calliptera
ENSORLG00000020457	rabl3	100	91.845	ENSAMXG00000038716	rabl3	100	91.845	Astyanax_mexicanus
ENSORLG00000020457	rabl3	100	86.864	ENSBTAG00000015898	RABL3	100	86.864	Bos_taurus
ENSORLG00000020457	rabl3	100	86.864	ENSCJAG00000008611	RABL3	100	86.864	Callithrix_jacchus
ENSORLG00000020457	rabl3	100	86.441	ENSCAFG00000011292	RABL3	89	86.441	Canis_familiaris
ENSORLG00000020457	rabl3	100	86.441	ENSCAFG00020006397	RABL3	100	86.441	Canis_lupus_dingo
ENSORLG00000020457	rabl3	100	86.864	ENSCHIG00000017365	RABL3	100	86.864	Capra_hircus
ENSORLG00000020457	rabl3	100	85.169	ENSCPOG00000009645	RABL3	100	85.169	Cavia_porcellus
ENSORLG00000020457	rabl3	100	85.169	ENSCATG00000032561	RABL3	100	85.169	Cercocebus_atys
ENSORLG00000020457	rabl3	100	84.746	ENSCLAG00000010855	RABL3	100	84.746	Chinchilla_lanigera
ENSORLG00000020457	rabl3	99	84.979	ENSCSAG00000007155	RABL3	100	84.979	Chlorocebus_sabaeus
ENSORLG00000020457	rabl3	100	86.441	ENSCPBG00000001999	RABL3	100	86.441	Chrysemys_picta_bellii
ENSORLG00000020457	rabl3	100	85.169	ENSCANG00000031684	RABL3	100	85.169	Colobus_angolensis_palliatus
ENSORLG00000020457	rabl3	100	82.627	ENSCGRG00001021537	Rabl3	100	82.627	Cricetulus_griseus_chok1gshd
ENSORLG00000020457	rabl3	100	82.627	ENSCGRG00000002114	Rabl3	100	82.627	Cricetulus_griseus_crigri
ENSORLG00000020457	rabl3	100	81.545	ENSCSEG00000014982	rabl3	100	81.545	Cynoglossus_semilaevis
ENSORLG00000020457	rabl3	100	78.112	ENSCVAG00000009904	rabl3	91	93.820	Cyprinodon_variegatus
ENSORLG00000020457	rabl3	100	92.275	ENSDARG00000040959	rabl3	100	92.275	Danio_rerio
ENSORLG00000020457	rabl3	100	85.169	ENSDNOG00000008174	RABL3	100	85.169	Dasypus_novemcinctus
ENSORLG00000020457	rabl3	100	83.898	ENSETEG00000010206	RABL3	100	83.898	Echinops_telfairi
ENSORLG00000020457	rabl3	100	86.864	ENSECAG00000023059	RABL3	100	86.864	Equus_caballus
ENSORLG00000020457	rabl3	100	80.932	ENSEEUG00000002897	RABL3	100	80.932	Erinaceus_europaeus
ENSORLG00000020457	rabl3	100	91.845	ENSELUG00000014758	rabl3	100	91.845	Esox_lucius
ENSORLG00000020457	rabl3	100	86.441	ENSFCAG00000031879	RABL3	100	76.695	Felis_catus
ENSORLG00000020457	rabl3	100	84.322	ENSFALG00000005296	RABL3	100	84.322	Ficedula_albicollis
ENSORLG00000020457	rabl3	100	85.532	ENSFDAG00000000307	RABL3	100	85.532	Fukomys_damarensis
ENSORLG00000020457	rabl3	100	91.845	ENSFHEG00000011273	rabl3	100	91.845	Fundulus_heteroclitus
ENSORLG00000020457	rabl3	100	93.991	ENSGMOG00000007845	rabl3	100	93.991	Gadus_morhua
ENSORLG00000020457	rabl3	100	85.593	ENSGALG00000014949	RABL3	100	85.593	Gallus_gallus
ENSORLG00000020457	rabl3	100	90.558	ENSGAFG00000015953	rabl3	100	90.558	Gambusia_affinis
ENSORLG00000020457	rabl3	100	92.704	ENSGACG00000007387	rabl3	100	93.023	Gasterosteus_aculeatus
ENSORLG00000020457	rabl3	100	86.864	ENSGAGG00000003677	RABL3	100	86.864	Gopherus_agassizii
ENSORLG00000020457	rabl3	100	84.746	ENSGGOG00000006059	RABL3	100	84.746	Gorilla_gorilla
ENSORLG00000020457	rabl3	100	95.708	ENSHBUG00000019478	rabl3	93	95.708	Haplochromis_burtoni
ENSORLG00000020457	rabl3	100	85.532	ENSHGLG00000014491	RABL3	100	85.532	Heterocephalus_glaber_female
ENSORLG00000020457	rabl3	100	85.532	ENSHGLG00100004866	RABL3	100	85.532	Heterocephalus_glaber_male
ENSORLG00000020457	rabl3	100	80.258	ENSHCOG00000019245	rabl3	91	96.067	Hippocampus_comes
ENSORLG00000020457	rabl3	100	90.558	ENSIPUG00000012657	rabl3	100	90.558	Ictalurus_punctatus
ENSORLG00000020457	rabl3	100	84.746	ENSSTOG00000019452	RABL3	100	84.746	Ictidomys_tridecemlineatus
ENSORLG00000020457	rabl3	100	75.424	ENSJJAG00000023553	Rabl3	100	75.424	Jaculus_jaculus
ENSORLG00000020457	rabl3	100	90.558	ENSKMAG00000015464	rabl3	100	90.558	Kryptolebias_marmoratus
ENSORLG00000020457	rabl3	100	94.017	ENSLBEG00000010627	-	100	94.017	Labrus_bergylta
ENSORLG00000020457	rabl3	100	94.017	ENSLBEG00000020595	rabl3	100	94.017	Labrus_bergylta
ENSORLG00000020457	rabl3	100	86.441	ENSLOCG00000006265	rabl3	100	86.441	Lepisosteus_oculatus
ENSORLG00000020457	rabl3	100	86.441	ENSLAFG00000003711	RABL3	100	86.441	Loxodonta_africana
ENSORLG00000020457	rabl3	100	85.169	ENSMFAG00000031923	RABL3	100	85.169	Macaca_fascicularis
ENSORLG00000020457	rabl3	100	75.424	ENSMMUG00000001594	RABL3	100	75.424	Macaca_mulatta
ENSORLG00000020457	rabl3	100	85.169	ENSMNEG00000043980	RABL3	100	85.169	Macaca_nemestrina
ENSORLG00000020457	rabl3	100	85.169	ENSMLEG00000028177	RABL3	100	85.169	Mandrillus_leucophaeus
ENSORLG00000020457	rabl3	100	94.421	ENSMAMG00000015155	rabl3	100	94.421	Mastacembelus_armatus
ENSORLG00000020457	rabl3	100	95.279	ENSMZEG00005002607	rabl3	100	95.279	Maylandia_zebra
ENSORLG00000020457	rabl3	100	82.627	ENSMAUG00000013022	Rabl3	100	82.627	Mesocricetus_auratus
ENSORLG00000020457	rabl3	100	86.017	ENSMICG00000049288	RABL3	100	86.017	Microcebus_murinus
ENSORLG00000020457	rabl3	100	82.203	ENSMOCG00000015237	Rabl3	100	82.203	Microtus_ochrogaster
ENSORLG00000020457	rabl3	100	89.787	ENSMMOG00000005628	rabl3	100	89.787	Mola_mola
ENSORLG00000020457	rabl3	100	85.169	ENSMODG00000018232	RABL3	100	85.169	Monodelphis_domestica
ENSORLG00000020457	rabl3	100	87.712	ENSMALG00000018837	rabl3	100	87.712	Monopterus_albus
ENSORLG00000020457	rabl3	100	82.627	MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	Mus_caroli
ENSORLG00000020457	rabl3	100	82.627	ENSMUSG00000022827	Rabl3	100	92.248	Mus_musculus
ENSORLG00000020457	rabl3	100	82.203	MGP_PahariEiJ_G0016429	Rabl3	100	92.248	Mus_pahari
ENSORLG00000020457	rabl3	100	82.627	MGP_SPRETEiJ_G0021628	Rabl3	100	92.248	Mus_spretus
ENSORLG00000020457	rabl3	100	86.441	ENSMPUG00000008257	RABL3	89	86.441	Mustela_putorius_furo
ENSORLG00000020457	rabl3	100	84.746	ENSMLUG00000014113	RABL3	100	84.746	Myotis_lucifugus
ENSORLG00000020457	rabl3	99	75.652	ENSNGAG00000001939	Rabl3	99	75.652	Nannospalax_galili
ENSORLG00000020457	rabl3	94	94.545	ENSNBRG00000012423	rabl3	95	94.643	Neolamprologus_brichardi
ENSORLG00000020457	rabl3	100	84.746	ENSNLEG00000031723	RABL3	100	84.746	Nomascus_leucogenys
ENSORLG00000020457	rabl3	100	85.169	ENSMEUG00000006606	RABL3	100	85.169	Notamacropus_eugenii
ENSORLG00000020457	rabl3	100	84.746	ENSODEG00000004758	-	100	84.746	Octodon_degus
ENSORLG00000020457	rabl3	100	96.137	ENSONIG00000004281	rabl3	100	96.137	Oreochromis_niloticus
ENSORLG00000020457	rabl3	99	84.188	ENSOANG00000003928	RABL3	99	84.188	Ornithorhynchus_anatinus
ENSORLG00000020457	rabl3	100	100.000	ENSORLG00020008991	rabl3	100	94.850	Oryzias_latipes_hni
ENSORLG00000020457	rabl3	100	100.000	ENSORLG00015005649	rabl3	88	100.000	Oryzias_latipes_hsok
ENSORLG00000020457	rabl3	100	98.712	ENSOMEG00000015066	rabl3	100	98.712	Oryzias_melastigma
ENSORLG00000020457	rabl3	100	86.017	ENSOGAG00000005961	RABL3	100	86.017	Otolemur_garnettii
ENSORLG00000020457	rabl3	100	86.864	ENSOARG00000019939	RABL3	100	86.864	Ovis_aries
ENSORLG00000020457	rabl3	94	83.333	ENSPPAG00000036997	RABL3	87	83.333	Pan_paniscus
ENSORLG00000020457	rabl3	100	86.441	ENSPPRG00000016325	RABL3	100	86.441	Panthera_pardus
ENSORLG00000020457	rabl3	100	86.441	ENSPTIG00000018021	RABL3	100	86.441	Panthera_tigris_altaica
ENSORLG00000020457	rabl3	100	84.746	ENSPTRG00000015272	RABL3	100	84.746	Pan_troglodytes
ENSORLG00000020457	rabl3	100	85.169	ENSPANG00000001339	RABL3	100	85.169	Papio_anubis
ENSORLG00000020457	rabl3	100	91.416	ENSPKIG00000007818	rabl3	100	91.416	Paramormyrops_kingsleyae
ENSORLG00000020457	rabl3	100	86.017	ENSPSIG00000011358	RABL3	100	86.017	Pelodiscus_sinensis
ENSORLG00000020457	rabl3	100	90.558	ENSPMGG00000015794	rabl3	100	90.558	Periophthalmus_magnuspinnatus
ENSORLG00000020457	rabl3	100	82.627	ENSPEMG00000016913	Rabl3	100	82.627	Peromyscus_maniculatus_bairdii
ENSORLG00000020457	rabl3	100	85.169	ENSPCIG00000018922	RABL3	100	85.169	Phascolarctos_cinereus
ENSORLG00000020457	rabl3	100	92.704	ENSPFOG00000008586	rabl3	100	92.704	Poecilia_formosa
ENSORLG00000020457	rabl3	100	92.704	ENSPLAG00000014482	rabl3	100	92.704	Poecilia_latipinna
ENSORLG00000020457	rabl3	100	92.704	ENSPMEG00000002295	rabl3	100	92.704	Poecilia_mexicana
ENSORLG00000020457	rabl3	100	92.275	ENSPREG00000014815	rabl3	100	92.275	Poecilia_reticulata
ENSORLG00000020457	rabl3	100	85.169	ENSPPYG00000013501	RABL3	100	85.169	Pongo_abelii
ENSORLG00000020457	rabl3	100	86.441	ENSPCOG00000022230	RABL3	100	86.441	Propithecus_coquereli
ENSORLG00000020457	rabl3	100	84.746	ENSPVAG00000010013	RABL3	100	84.746	Pteropus_vampyrus
ENSORLG00000020457	rabl3	100	95.708	ENSPNYG00000006659	rabl3	100	95.708	Pundamilia_nyererei
ENSORLG00000020457	rabl3	100	93.562	ENSPNAG00000000748	rabl3	100	93.562	Pygocentrus_nattereri
ENSORLG00000020457	rabl3	100	82.203	ENSRNOG00000026085	Rabl3	100	82.203	Rattus_norvegicus
ENSORLG00000020457	rabl3	100	85.169	ENSRBIG00000040941	RABL3	100	85.169	Rhinopithecus_bieti
ENSORLG00000020457	rabl3	100	85.169	ENSRROG00000043745	RABL3	100	85.169	Rhinopithecus_roxellana
ENSORLG00000020457	rabl3	100	86.864	ENSSBOG00000004022	RABL3	100	86.864	Saimiri_boliviensis_boliviensis
ENSORLG00000020457	rabl3	100	84.322	ENSSHAG00000012233	RABL3	100	84.322	Sarcophilus_harrisii
ENSORLG00000020457	rabl3	100	91.416	ENSSFOG00015010171	rabl3	100	91.416	Scleropages_formosus
ENSORLG00000020457	rabl3	100	94.017	ENSSMAG00000002403	rabl3	100	94.017	Scophthalmus_maximus
ENSORLG00000020457	rabl3	100	95.279	ENSSDUG00000012078	rabl3	100	95.279	Seriola_dumerili
ENSORLG00000020457	rabl3	100	95.279	ENSSLDG00000021899	rabl3	100	95.279	Seriola_lalandi_dorsalis
ENSORLG00000020457	rabl3	100	86.864	ENSSARG00000008316	RABL3	100	86.864	Sorex_araneus
ENSORLG00000020457	rabl3	100	86.441	ENSSPUG00000017490	RABL3	100	86.441	Sphenodon_punctatus
ENSORLG00000020457	rabl3	100	95.279	ENSSPAG00000011642	rabl3	100	95.279	Stegastes_partitus
ENSORLG00000020457	rabl3	100	86.864	ENSSSCG00000035258	RABL3	100	86.864	Sus_scrofa
ENSORLG00000020457	rabl3	100	84.746	ENSTGUG00000013374	RABL3	100	84.746	Taeniopygia_guttata
ENSORLG00000020457	rabl3	80	90.000	ENSTRUG00000007846	RABL3	100	94.531	Takifugu_rubripes
ENSORLG00000020457	rabl3	100	73.305	ENSTBEG00000005153	RABL3	100	73.305	Tupaia_belangeri
ENSORLG00000020457	rabl3	100	85.593	ENSUAMG00000005299	RABL3	100	85.593	Ursus_americanus
ENSORLG00000020457	rabl3	100	85.593	ENSUMAG00000025256	RABL3	89	85.593	Ursus_maritimus
ENSORLG00000020457	rabl3	100	86.864	ENSVPAG00000003776	RABL3	100	86.864	Vicugna_pacos
ENSORLG00000020457	rabl3	100	86.441	ENSVVUG00000022300	RABL3	89	86.441	Vulpes_vulpes
ENSORLG00000020457	rabl3	100	91.845	ENSXMAG00000003244	rabl3	100	91.845	Xiphophorus_maculatus