EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000022089 (Gene tree)
Gene ID: -
Gene Symbol: aff3
Alias: -
Full Name: AF4/FMR2 family%2C member 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 26074 bases
Position: chr21:9962159-9988232
Accession: ZDB-GENE-030219-193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000039171	AF-4	PF05110.13	1.2e-125	1	1
ENSORLP00000038187	AF-4	PF05110.13	3.4e-107	1	1
ENSORLP00000044413	AF-4	PF05110.13	4.2e-105	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000043555	-	5929	-	ENSORLP00000044413	1016 (aa)	-	-
ENSORLT00000041383	-	4206	-	ENSORLP00000039171	1204 (aa)	-	UPI0002A4AF70
ENSORLT00000041245	-	4392	-	ENSORLP00000038187	1181 (aa)	-	-

Gene Model

Click here to download ENSORLG00000022089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000022089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000022089	aff3	96	60.831	ENSAPOG00000006031	aff3	100	62.054	Acanthochromis_polyacanthus
ENSORLG00000022089	aff3	96	59.149	ENSAPEG00000006641	aff3	100	61.909	Amphiprion_percula
ENSORLG00000022089	aff3	100	61.249	ENSATEG00000008905	aff3	100	62.651	Anabas_testudineus
ENSORLG00000022089	aff3	55	51.271	ENSAMXG00000005439	aff3	66	51.199	Astyanax_mexicanus
ENSORLG00000022089	aff3	97	52.712	ENSCVAG00000019194	aff3	99	54.395	Cyprinodon_variegatus
ENSORLG00000022089	aff3	67	60.425	ENSELUG00000020087	aff3	93	56.593	Esox_lucius
ENSORLG00000022089	aff3	88	52.197	ENSGAFG00000021231	aff3	99	52.983	Gambusia_affinis
ENSORLG00000022089	aff3	60	48.844	ENSIPUG00000004129	aff3	100	43.927	Ictalurus_punctatus
ENSORLG00000022089	aff3	98	57.647	ENSKMAG00000001570	aff3	98	60.385	Kryptolebias_marmoratus
ENSORLG00000022089	aff3	98	58.262	ENSMAMG00000016840	aff3	99	59.149	Mastacembelus_armatus
ENSORLG00000022089	aff3	100	97.757	ENSORLG00020011289	aff3	100	97.757	Oryzias_latipes_hni
ENSORLG00000022089	aff3	96	98.265	ENSORLG00015014530	aff3	99	98.332	Oryzias_latipes_hsok
ENSORLG00000022089	aff3	100	86.899	ENSOMEG00000011755	aff3	100	86.816	Oryzias_melastigma
ENSORLG00000022089	aff3	96	56.818	ENSPFOG00000015830	aff3	99	58.834	Poecilia_formosa
ENSORLG00000022089	aff3	96	56.749	ENSPREG00000008458	aff3	100	58.219	Poecilia_reticulata
ENSORLG00000022089	aff3	100	60.161	ENSSMAG00000019954	aff3	100	60.368	Scophthalmus_maximus
ENSORLG00000022089	aff3	98	59.595	ENSSLDG00000005399	aff3	100	60.935	Seriola_lalandi_dorsalis
ENSORLG00000022089	aff3	98	63.778	ENSSPAG00000020071	aff3	99	64.186	Stegastes_partitus
ENSORLG00000022089	aff3	100	58.819	ENSXMAG00000030063	aff3	100	58.180	Xiphophorus_maculatus