EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000022191 (Gene tree)
Gene ID: 101157868
Gene Symbol: tra2a
Alias: -
Full Name: transformer-2 protein homolog alpha
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 12318 bases
Position: chr11:10777991-10790308
Accession: 101157868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000027595	RRM_1	PF00076.22	4.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000027298	-	5201	XM_004073843	ENSORLP00000027595	268 (aa)	XP_004073891	H2LIP4

Gene Model

Click here to download ENSORLG00000022191's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000022191's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000022191	tra2a	60	67.073	ENSORLG00000016554	tra2b	72	62.319
ENSORLG00000022191	tra2a	60	40.000	ENSORLG00000012435	elavl1a	79	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000022191	tra2a	60	74.251	ENSG00000164548	TRA2A	84	75.658	Homo_sapiens
ENSORLG00000022191	tra2a	56	76.510	ENSAPOG00000017425	tra2a	90	65.672	Acanthochromis_polyacanthus
ENSORLG00000022191	tra2a	60	74.699	ENSAMEG00000003501	TRA2A	71	69.565	Ailuropoda_melanoleuca
ENSORLG00000022191	tra2a	56	79.866	ENSACIG00000001333	tra2a	79	79.866	Amphilophus_citrinellus
ENSORLG00000022191	tra2a	90	65.672	ENSAOCG00000015445	tra2a	90	67.164	Amphiprion_ocellaris
ENSORLG00000022191	tra2a	90	65.672	ENSAPEG00000018557	tra2a	90	67.164	Amphiprion_percula
ENSORLG00000022191	tra2a	60	68.478	ENSATEG00000000671	tra2a	83	67.600	Anabas_testudineus
ENSORLG00000022191	tra2a	60	76.543	ENSAPLG00000013689	TRA2A	86	71.930	Anas_platyrhynchos
ENSORLG00000022191	tra2a	60	74.850	ENSACAG00000013502	TRA2A	82	71.616	Anolis_carolinensis
ENSORLG00000022191	tra2a	50	75.714	ENSANAG00000035184	TRA2A	77	64.171	Aotus_nancymaae
ENSORLG00000022191	tra2a	60	68.681	ENSACLG00000024845	tra2a	90	63.704	Astatotilapia_calliptera
ENSORLG00000022191	tra2a	62	73.563	ENSAMXG00000005553	tra2a	94	69.787	Astyanax_mexicanus
ENSORLG00000022191	tra2a	60	74.699	ENSBTAG00000012622	TRA2A	82	70.000	Bos_taurus
ENSORLG00000022191	tra2a	60	74.251	ENSCJAG00000001509	-	82	69.697	Callithrix_jacchus
ENSORLG00000022191	tra2a	66	73.481	ENSCJAG00000045802	-	87	68.261	Callithrix_jacchus
ENSORLG00000022191	tra2a	60	74.699	ENSCAFG00000002788	TRA2A	83	70.000	Canis_familiaris
ENSORLG00000022191	tra2a	60	74.699	ENSCAFG00020002745	TRA2A	75	71.717	Canis_lupus_dingo
ENSORLG00000022191	tra2a	60	74.251	ENSTSYG00000000388	TRA2A	84	75.658	Carlito_syrichta
ENSORLG00000022191	tra2a	60	59.880	ENSCAPG00000017377	TRA2A	83	59.307	Cavia_aperea
ENSORLG00000022191	tra2a	60	74.251	ENSCPOG00000010739	TRA2A	82	69.697	Cavia_porcellus
ENSORLG00000022191	tra2a	60	74.251	ENSCCAG00000019576	TRA2A	84	75.658	Cebus_capucinus
ENSORLG00000022191	tra2a	60	74.251	ENSCATG00000041219	TRA2A	84	75.658	Cercocebus_atys
ENSORLG00000022191	tra2a	60	74.251	ENSCLAG00000007917	TRA2A	82	69.697	Chinchilla_lanigera
ENSORLG00000022191	tra2a	60	74.251	ENSCSAG00000014051	TRA2A	82	69.697	Chlorocebus_sabaeus
ENSORLG00000022191	tra2a	60	74.251	ENSCHOG00000001130	TRA2A	82	69.697	Choloepus_hoffmanni
ENSORLG00000022191	tra2a	60	75.758	ENSCPBG00000022466	TRA2A	82	70.996	Chrysemys_picta_bellii
ENSORLG00000022191	tra2a	60	74.251	ENSCANG00000031292	TRA2A	84	75.658	Colobus_angolensis_palliatus
ENSORLG00000022191	tra2a	60	73.373	ENSCGRG00001019980	Tra2a	82	69.264	Cricetulus_griseus_chok1gshd
ENSORLG00000022191	tra2a	60	73.373	ENSCGRG00000006087	Tra2a	86	69.264	Cricetulus_griseus_crigri
ENSORLG00000022191	tra2a	64	62.755	ENSCSEG00000012193	tra2a	96	68.229	Cynoglossus_semilaevis
ENSORLG00000022191	tra2a	52	74.825	ENSDARG00000007863	tra2a	88	65.714	Danio_rerio
ENSORLG00000022191	tra2a	60	74.251	ENSDNOG00000039446	TRA2A	82	69.697	Dasypus_novemcinctus
ENSORLG00000022191	tra2a	60	74.251	ENSDORG00000009361	Tra2a	82	69.869	Dipodomys_ordii
ENSORLG00000022191	tra2a	60	72.674	ENSETEG00000007250	TRA2A	70	70.149	Echinops_telfairi
ENSORLG00000022191	tra2a	60	74.699	ENSEASG00005022002	TRA2A	82	70.000	Equus_asinus_asinus
ENSORLG00000022191	tra2a	60	74.699	ENSECAG00000011508	TRA2A	82	70.000	Equus_caballus
ENSORLG00000022191	tra2a	60	73.054	ENSEEUG00000015674	TRA2A	82	68.831	Erinaceus_europaeus
ENSORLG00000022191	tra2a	76	57.692	ENSELUG00000005846	tra2a	91	54.915	Esox_lucius
ENSORLG00000022191	tra2a	60	74.699	ENSFCAG00000005361	TRA2A	82	70.000	Felis_catus
ENSORLG00000022191	tra2a	60	76.543	ENSFALG00000009605	TRA2A	85	72.566	Ficedula_albicollis
ENSORLG00000022191	tra2a	60	73.373	ENSFDAG00000004949	TRA2A	82	68.966	Fukomys_damarensis
ENSORLG00000022191	tra2a	63	60.309	ENSGMOG00000013740	tra2a	91	54.579	Gadus_morhua
ENSORLG00000022191	tra2a	60	76.543	ENSGALG00000010973	TRA2A	82	71.930	Gallus_gallus
ENSORLG00000022191	tra2a	90	60.465	ENSGACG00000006878	tra2a	89	60.465	Gasterosteus_aculeatus
ENSORLG00000022191	tra2a	60	76.687	ENSGAGG00000005793	TRA2A	82	71.616	Gopherus_agassizii
ENSORLG00000022191	tra2a	60	74.251	ENSGGOG00000009053	TRA2A	84	75.658	Gorilla_gorilla
ENSORLG00000022191	tra2a	60	69.231	ENSHBUG00000018234	tra2a	90	64.074	Haplochromis_burtoni
ENSORLG00000022191	tra2a	60	74.251	ENSHGLG00000012168	TRA2A	82	69.697	Heterocephalus_glaber_female
ENSORLG00000022191	tra2a	60	74.251	ENSHGLG00100014577	TRA2A	82	69.697	Heterocephalus_glaber_male
ENSORLG00000022191	tra2a	66	59.686	ENSHCOG00000006314	tra2a	80	60.000	Hippocampus_comes
ENSORLG00000022191	tra2a	60	74.251	ENSSTOG00000012073	TRA2A	82	69.697	Ictidomys_tridecemlineatus
ENSORLG00000022191	tra2a	60	74.251	ENSJJAG00000022787	Tra2a	84	69.869	Jaculus_jaculus
ENSORLG00000022191	tra2a	84	61.508	ENSLBEG00000005297	tra2a	85	63.095	Labrus_bergylta
ENSORLG00000022191	tra2a	60	72.619	ENSLACG00000014765	TRA2A	71	69.307	Latimeria_chalumnae
ENSORLG00000022191	tra2a	90	61.194	ENSLOCG00000011615	-	90	63.060	Lepisosteus_oculatus
ENSORLG00000022191	tra2a	60	73.810	ENSLAFG00000006598	TRA2A	82	69.397	Loxodonta_africana
ENSORLG00000022191	tra2a	60	74.251	ENSMFAG00000043211	TRA2A	84	75.658	Macaca_fascicularis
ENSORLG00000022191	tra2a	60	74.251	ENSMMUG00000006286	TRA2A	81	75.714	Macaca_mulatta
ENSORLG00000022191	tra2a	60	74.251	ENSMNEG00000040670	TRA2A	84	75.658	Macaca_nemestrina
ENSORLG00000022191	tra2a	60	74.251	ENSMLEG00000032154	TRA2A	84	75.658	Mandrillus_leucophaeus
ENSORLG00000022191	tra2a	60	68.681	ENSMZEG00005009142	tra2a	90	63.704	Maylandia_zebra
ENSORLG00000022191	tra2a	60	76.543	ENSMGAG00000010514	TRA2A	85	71.930	Meleagris_gallopavo
ENSORLG00000022191	tra2a	70	64.550	ENSMICG00000036849	-	69	64.246	Microcebus_murinus
ENSORLG00000022191	tra2a	60	74.251	ENSMICG00000043639	-	84	75.658	Microcebus_murinus
ENSORLG00000022191	tra2a	65	74.432	ENSMOCG00000010249	-	76	71.875	Microtus_ochrogaster
ENSORLG00000022191	tra2a	66	60.112	ENSMOCG00000006467	-	75	65.278	Microtus_ochrogaster
ENSORLG00000022191	tra2a	70	73.404	ENSMMOG00000020174	tra2a	79	72.052	Mola_mola
ENSORLG00000022191	tra2a	60	73.653	ENSMODG00000000807	TRA2A	82	70.130	Monodelphis_domestica
ENSORLG00000022191	tra2a	84	61.154	ENSMALG00000020875	tra2a	90	62.319	Monopterus_albus
ENSORLG00000022191	tra2a	60	73.373	ENSMUSG00000029817	Tra2a	83	69.264	Mus_musculus
ENSORLG00000022191	tra2a	60	73.373	MGP_PahariEiJ_G0022115	Tra2a	83	69.264	Mus_pahari
ENSORLG00000022191	tra2a	60	73.373	MGP_SPRETEiJ_G0029368	Tra2a	83	69.264	Mus_spretus
ENSORLG00000022191	tra2a	60	74.699	ENSMPUG00000013480	TRA2A	82	70.000	Mustela_putorius_furo
ENSORLG00000022191	tra2a	60	72.619	ENSMLUG00000013972	TRA2A	82	68.534	Myotis_lucifugus
ENSORLG00000022191	tra2a	60	73.653	ENSNGAG00000023805	Tra2a	82	69.432	Nannospalax_galili
ENSORLG00000022191	tra2a	56	76.129	ENSNBRG00000005992	tra2a	73	76.129	Neolamprologus_brichardi
ENSORLG00000022191	tra2a	66	56.593	ENSNLEG00000029659	-	88	59.603	Nomascus_leucogenys
ENSORLG00000022191	tra2a	60	74.251	ENSNLEG00000014794	TRA2A	84	75.658	Nomascus_leucogenys
ENSORLG00000022191	tra2a	60	73.214	ENSMEUG00000001202	TRA2A	82	69.828	Notamacropus_eugenii
ENSORLG00000022191	tra2a	60	73.054	ENSOPRG00000007606	TRA2A	82	68.398	Ochotona_princeps
ENSORLG00000022191	tra2a	60	74.251	ENSODEG00000008335	TRA2A	82	69.697	Octodon_degus
ENSORLG00000022191	tra2a	60	68.649	ENSONIG00000004503	tra2a	90	64.103	Oreochromis_niloticus
ENSORLG00000022191	tra2a	60	68.182	ENSOANG00000014202	TRA2A	82	65.823	Ornithorhynchus_anatinus
ENSORLG00000022191	tra2a	60	74.251	ENSOCUG00000024139	TRA2A	82	69.697	Oryctolagus_cuniculus
ENSORLG00000022191	tra2a	100	99.627	ENSORLG00020003490	tra2a	100	99.627	Oryzias_latipes_hni
ENSORLG00000022191	tra2a	100	99.254	ENSORLG00015015485	tra2a	100	99.254	Oryzias_latipes_hsok
ENSORLG00000022191	tra2a	90	92.975	ENSOMEG00000017864	tra2a	89	92.975	Oryzias_melastigma
ENSORLG00000022191	tra2a	60	74.251	ENSOGAG00000009733	TRA2A	82	69.697	Otolemur_garnettii
ENSORLG00000022191	tra2a	60	74.699	ENSOARG00000013147	TRA2A	82	70.000	Ovis_aries
ENSORLG00000022191	tra2a	60	71.176	ENSOARG00000002323	-	74	69.543	Ovis_aries
ENSORLG00000022191	tra2a	60	74.251	ENSPPAG00000034382	TRA2A	84	75.658	Pan_paniscus
ENSORLG00000022191	tra2a	60	74.699	ENSPPRG00000015216	TRA2A	82	70.000	Panthera_pardus
ENSORLG00000022191	tra2a	60	74.699	ENSPTIG00000021114	TRA2A	82	70.000	Panthera_tigris_altaica
ENSORLG00000022191	tra2a	60	74.251	ENSPTRG00000046098	-	82	69.697	Pan_troglodytes
ENSORLG00000022191	tra2a	62	73.988	ENSPTRG00000018988	TRA2A	84	75.658	Pan_troglodytes
ENSORLG00000022191	tra2a	60	74.251	ENSPANG00000014541	TRA2A	82	69.697	Papio_anubis
ENSORLG00000022191	tra2a	90	62.406	ENSPKIG00000012298	tra2a	90	63.158	Paramormyrops_kingsleyae
ENSORLG00000022191	tra2a	60	74.850	ENSPSIG00000014993	TRA2A	88	67.755	Pelodiscus_sinensis
ENSORLG00000022191	tra2a	60	73.810	ENSPEMG00000008564	-	82	69.565	Peromyscus_maniculatus_bairdii
ENSORLG00000022191	tra2a	65	60.795	ENSPMAG00000007947	tra2a	68	60.428	Petromyzon_marinus
ENSORLG00000022191	tra2a	60	74.251	ENSPCIG00000007917	TRA2A	82	70.130	Phascolarctos_cinereus
ENSORLG00000022191	tra2a	60	74.251	ENSPPYG00000017728	TRA2A	82	69.697	Pongo_abelii
ENSORLG00000022191	tra2a	60	73.810	ENSPCAG00000004148	TRA2A	83	69.397	Procavia_capensis
ENSORLG00000022191	tra2a	60	53.704	ENSPCOG00000020465	TRA2A	79	55.752	Propithecus_coquereli
ENSORLG00000022191	tra2a	60	73.214	ENSPVAG00000011298	TRA2A	82	68.966	Pteropus_vampyrus
ENSORLG00000022191	tra2a	56	74.684	ENSPNYG00000020134	tra2a	76	74.684	Pundamilia_nyererei
ENSORLG00000022191	tra2a	61	70.330	ENSPNAG00000000482	tra2a	72	68.868	Pygocentrus_nattereri
ENSORLG00000022191	tra2a	60	73.373	ENSRNOG00000009156	Tra2a	82	69.264	Rattus_norvegicus
ENSORLG00000022191	tra2a	60	74.251	ENSRROG00000030758	TRA2A	84	75.658	Rhinopithecus_roxellana
ENSORLG00000022191	tra2a	60	74.251	ENSSBOG00000031562	TRA2A	84	75.658	Saimiri_boliviensis_boliviensis
ENSORLG00000022191	tra2a	60	74.251	ENSSHAG00000005727	TRA2A	82	70.563	Sarcophilus_harrisii
ENSORLG00000022191	tra2a	61	75.000	ENSSFOG00015014004	tra2a	90	62.030	Scleropages_formosus
ENSORLG00000022191	tra2a	65	68.586	ENSSMAG00000014242	tra2a	84	65.447	Scophthalmus_maximus
ENSORLG00000022191	tra2a	60	74.118	ENSSDUG00000005610	tra2a	89	68.605	Seriola_dumerili
ENSORLG00000022191	tra2a	56	75.163	ENSSLDG00000025577	tra2a	81	73.856	Seriola_lalandi_dorsalis
ENSORLG00000022191	tra2a	60	73.529	ENSSPUG00000006143	TRA2A	82	69.492	Sphenodon_punctatus
ENSORLG00000022191	tra2a	90	65.074	ENSSPAG00000004184	tra2a	90	66.544	Stegastes_partitus
ENSORLG00000022191	tra2a	60	74.699	ENSSSCG00000015387	TRA2A	82	70.000	Sus_scrofa
ENSORLG00000022191	tra2a	63	73.964	ENSTGUG00000002795	TRA2A	75	70.619	Taeniopygia_guttata
ENSORLG00000022191	tra2a	60	74.096	ENSTTRG00000008922	TRA2A	82	69.565	Tursiops_truncatus
ENSORLG00000022191	tra2a	54	75.163	ENSUMAG00000001181	TRA2A	79	75.163	Ursus_maritimus
ENSORLG00000022191	tra2a	60	74.699	ENSVVUG00000001045	TRA2A	82	70.000	Vulpes_vulpes
ENSORLG00000022191	tra2a	61	71.176	ENSXETG00000007397	tra2a	73	66.981	Xenopus_tropicalis